Simple Neurite Tracer: open source software for reconstruction, visualization and analysis of neuronal processes.
Bioinformatics
; 27(17): 2453-4, 2011 Sep 01.
Article
em En
| MEDLINE
| ID: mdl-21727141
ABSTRACT
MOTIVATION Advances in techniques to sparsely label neurons unlock the potential to reconstruct connectivity from 3D image stacks acquired by light microscopy. We present an application for semi-automated tracing of neurons to quickly annotate noisy datasets and construct complex neuronal topologies, which we call the Simple Neurite Tracer. AVAILABILITY:
Simple Neurite Tracer is open source software, licensed under the GNU General Public Licence (GPL) and based on the public domain image processing software ImageJ. The software and further documentation are available via http//fiji.sc/Simple_Neurite_Tracer as part of the package Fiji, and can be used on Windows, Mac OS and Linux. Documentation and introductory screencasts are available at the same URL. CONTACT longair@ini.phys.ethz.ch; longair@ini.phys.ethz.ch.
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Software
/
Neuritos
/
Neurônios
Limite:
Animals
/
Humans
Idioma:
En
Ano de publicação:
2011
Tipo de documento:
Article