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CHROMATRA: a Galaxy tool for visualizing genome-wide chromatin signatures.
Hentrich, Thomas; Schulze, Julia M; Emberly, Eldon; Kobor, Michael S.
Afiliação
  • Hentrich T; Department of Computing Science, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.
Bioinformatics ; 28(5): 717-8, 2012 Mar 01.
Article em En | MEDLINE | ID: mdl-22238257
ABSTRACT
UNLABELLED CHROMATRA (CHROmatin Mapping Across TRAnscripts) is a visualization tool available as plug-in for the Galaxy platform. It allows detailed yet concise presentations of data derived from ChIP-chip or ChIP-seq experiments by visualizing enrichment scores across genes or other genomic features while accounting for their length and additional characteristics such as gene expression. It integrates into typical analysis workflows and enables rapid graphical assessment and comparison of genome-wide data at a glance.

AVAILABILITY:

https//github.com/cmmt/chromatra.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Software / Cromatina / Genômica Limite: Animals / Humans Idioma: En Ano de publicação: 2012 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Software / Cromatina / Genômica Limite: Animals / Humans Idioma: En Ano de publicação: 2012 Tipo de documento: Article