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Tracking the sources of blood meals of parasitic arthropods using shotgun proteomics and unidentified tandem mass spectral libraries.
Önder, Özlem; Shao, Wenguang; Lam, Henry; Brisson, Dustin.
Afiliação
  • Önder Ö; Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
  • Shao W; Bioengineering Graduate Program, Division of Biomedical Engineering, The Hong Kong University of Science and Technology, Hong Kong, China.
  • Lam H; 1] Bioengineering Graduate Program, Division of Biomedical Engineering, The Hong Kong University of Science and Technology, Hong Kong, China. [2] Department of Chemical and Biomolecular Engineering, The Hong Kong University of Science and Technology, Hong Kong, China.
  • Brisson D; Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Nat Protoc ; 9(4): 842-50, 2014 Apr.
Article em En | MEDLINE | ID: mdl-24625782
ABSTRACT
Identifying the species on which hematophagous arthropods feed is crucial for studying the factors that affect pathogen distributions and that can aid public health. Here we describe a protocol to identify the species a parasitic arthropod has previously fed upon by identifying the source of the remnants of a previous blood meal via shotgun proteomics and spectral matching. The protocol is a nontargeted approach that uses the entire detected blood proteome for source identification; it does not require a priori knowledge of genome or protein sequences. Instead, reference spectral libraries are compiled from the blood of multiple host species by using SpectraST, which takes ∼4 d; the identification of the species from which a previous blood meal of a hematophagous arthropod was taken is achieved with spectral matching against the reference spectral libraries, which takes approximately another 4 d. This method is robust against random degradation of the blood meal and can identify unknown blood remnants months after the feeding event.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Artrópodes / Vertebrados / Proteômica / Espectrometria de Massas em Tandem Tipo de estudo: Prognostic_studies Limite: Animals Idioma: En Ano de publicação: 2014 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Artrópodes / Vertebrados / Proteômica / Espectrometria de Massas em Tandem Tipo de estudo: Prognostic_studies Limite: Animals Idioma: En Ano de publicação: 2014 Tipo de documento: Article