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Integrated analysis of whole genome and transcriptome sequencing reveals diverse transcriptomic aberrations driven by somatic genomic changes in liver cancers.
Shiraishi, Yuichi; Fujimoto, Akihiro; Furuta, Mayuko; Tanaka, Hiroko; Chiba, Ken-ichi; Boroevich, Keith A; Abe, Tetsuo; Kawakami, Yoshiiku; Ueno, Masaki; Gotoh, Kunihito; Ariizumi, Shun-ichi; Shibuya, Tetsuo; Nakano, Kaoru; Sasaki, Aya; Maejima, Kazuhiro; Kitada, Rina; Hayami, Shinya; Shigekawa, Yoshinobu; Marubashi, Shigeru; Yamada, Terumasa; Kubo, Michiaki; Ishikawa, Osamu; Aikata, Hiroshi; Arihiro, Koji; Ohdan, Hideki; Yamamoto, Masakazu; Yamaue, Hiroki; Chayama, Kazuaki; Tsunoda, Tatsuhiko; Miyano, Satoru; Nakagawa, Hidewaki.
Afiliação
  • Shiraishi Y; Laboratory of DNA Information Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, 108-8639, Japan.
  • Fujimoto A; Laboratory for Genome Sequencing Analysis, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan; Laboratory for Medical Science Mathematics, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Furuta M; Laboratory for Genome Sequencing Analysis, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Tanaka H; Laboratory of Sequence Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, 108-8639, Japan.
  • Chiba K; Laboratory of DNA Information Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, 108-8639, Japan.
  • Boroevich KA; Laboratory for Medical Science Mathematics, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Abe T; Laboratory for Medical Science Mathematics, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Kawakami Y; Department of Medicine & Molecular Science, Hiroshima University School of Medicine, Hiroshima, 734-8551, Japan.
  • Ueno M; Second Department of Surgery, Wakayama Medical University, Wakayama, 641-8510, Japan.
  • Gotoh K; Department of Surgery, Osaka Medical Center for Cancer and Cardiovascular Diseases, Osaka, 537-8511, Japan.
  • Ariizumi S; Department of Surgery, Institute of Gastroenterology, Tokyo Women's Medical University, Tokyo, 162-8666, Japan.
  • Shibuya T; Laboratory of Sequence Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, 108-8639, Japan.
  • Nakano K; Laboratory for Genome Sequencing Analysis, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Sasaki A; Laboratory for Genome Sequencing Analysis, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Maejima K; Laboratory for Genome Sequencing Analysis, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Kitada R; Laboratory for Genome Sequencing Analysis, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Hayami S; Second Department of Surgery, Wakayama Medical University, Wakayama, 641-8510, Japan.
  • Shigekawa Y; Second Department of Surgery, Wakayama Medical University, Wakayama, 641-8510, Japan.
  • Marubashi S; Department of Surgery, Osaka Medical Center for Cancer and Cardiovascular Diseases, Osaka, 537-8511, Japan.
  • Yamada T; Department of Surgery, Osaka Medical Center for Cancer and Cardiovascular Diseases, Osaka, 537-8511, Japan.
  • Kubo M; Laboratory for Genotyping Development, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Ishikawa O; Department of Surgery, Osaka Medical Center for Cancer and Cardiovascular Diseases, Osaka, 537-8511, Japan.
  • Aikata H; Department of Medicine & Molecular Science, Hiroshima University School of Medicine, Hiroshima, 734-8551, Japan.
  • Arihiro K; Department of Anatomical Pathology, Hiroshima University School of Medicine, Hiroshima, 734-8551, Japan.
  • Ohdan H; Department of Gastroenterological Surgery, Hiroshima University School of Medicine, Hiroshima, 734-8551, Japan.
  • Yamamoto M; Department of Surgery, Institute of Gastroenterology, Tokyo Women's Medical University, Tokyo, 162-8666, Japan.
  • Yamaue H; Second Department of Surgery, Wakayama Medical University, Wakayama, 641-8510, Japan.
  • Chayama K; Department of Medicine & Molecular Science, Hiroshima University School of Medicine, Hiroshima, 734-8551, Japan.
  • Tsunoda T; Laboratory for Medical Science Mathematics, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
  • Miyano S; Laboratory of DNA Information Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, 108-8639, Japan; Laboratory of Sequence Analysis, Human Genome Center, The Institute of Medical Science, The University of Tokyo, Tokyo, 108-8639, Japan.
  • Nakagawa H; Laboratory for Genome Sequencing Analysis, RIEKN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
PLoS One ; 9(12): e114263, 2014.
Article em En | MEDLINE | ID: mdl-25526364
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genoma Humano / Carcinoma Hepatocelular / Transcriptoma / Evolução Clonal / Neoplasias Hepáticas / Mutação Tipo de estudo: Observational_studies / Prognostic_studies Limite: Humans Idioma: En Ano de publicação: 2014 Tipo de documento: Article
Texto completo
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XML
PubMed Links
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genoma Humano / Carcinoma Hepatocelular / Transcriptoma / Evolução Clonal / Neoplasias Hepáticas / Mutação Tipo de estudo: Observational_studies / Prognostic_studies Limite: Humans Idioma: En Ano de publicação: 2014 Tipo de documento: Article