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Two nearly complete mitogenomes of wheat stem borers, Cephus pygmeus (L.) and Cephus sareptanus Dovnar-Zapolskij (Hymenoptera: Cephidae): an unusual elongation of rrnS gene.
Korkmaz, Ertan Mahir; Dogan, Özgül; Budak, Mahir; Basibüyük, Hasan Hüseyin.
Afiliação
  • Korkmaz EM; Cumhuriyet University, Department of Molecular Biology and Genetics, Faculty of Science, Cumhuriyet University, Sivas 58140, Turkey. Electronic address: ekorkmaz@cumhuriyet.edu.tr.
  • Dogan Ö; Cumhuriyet University, Department of Molecular Biology and Genetics, Faculty of Science, Cumhuriyet University, Sivas 58140, Turkey.
  • Budak M; Cumhuriyet University, Department of Molecular Biology and Genetics, Faculty of Science, Cumhuriyet University, Sivas 58140, Turkey.
  • Basibüyük HH; Cumhuriyet University, Department of Biology, Faculty of Science, Cumhuriyet University, Sivas 58140, Turkey.
Gene ; 558(2): 254-64, 2015 Mar 10.
Article em En | MEDLINE | ID: mdl-25576223
ABSTRACT
Two nearly complete mitochondrial genomes (mitogenomes) of wheat stem borers, Cephus pygmeus and Cephus sareptanus (Hymenoptera Cephidae), were sequenced, characterised and compared with the previously known mitogenome of Cephus cinctus. The gene orders are mostly conserved, except for translocation of trnM and swapped position of trnI and trnQ. An A+T bias was found, but a deviation from strand asymmetry was also detected on the J strand. All protein coding genes (PCGs) are initiated by ATN codons, except for nad1, nad2 and atp8, and all are terminated with TAA, TA- or T- as a stop codon. The predicted secondary structures of rrnS and rrnL genes are mostly consistent with reported hymenopteran species. However, an unusual elongation in rrnS, not know elsewhere in the order, was discovered in Cephus species. Three autonomous sequences detected in domains I and II are mainly responsible for the length expansions.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Triticum / Expansão das Repetições de DNA / Genes Mitocondriais / Genoma de Inseto / Genoma Mitocondrial / Himenópteros Limite: Animals Idioma: En Ano de publicação: 2015 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Triticum / Expansão das Repetições de DNA / Genes Mitocondriais / Genoma de Inseto / Genoma Mitocondrial / Himenópteros Limite: Animals Idioma: En Ano de publicação: 2015 Tipo de documento: Article