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Comparative analytical evaluation of the respiratory TaqMan Array Card with real-time PCR and commercial multi-pathogen assays.
Harvey, John J; Chester, Stephanie; Burke, Stephen A; Ansbro, Marisela; Aden, Tricia; Gose, Remedios; Sciulli, Rebecca; Bai, Jing; DesJardin, Lucy; Benfer, Jeffrey L; Hall, Joshua; Smole, Sandra; Doan, Kimberly; Popowich, Michael D; St George, Kirsten; Quinlan, Tammy; Halse, Tanya A; Li, Zhen; Pérez-Osorio, Ailyn C; Glover, William A; Russell, Denny; Reisdorf, Erik; Whyte, Thomas; Whitaker, Brett; Hatcher, Cynthia; Srinivasan, Velusamy; Tatti, Kathleen; Tondella, Maria Lucia; Wang, Xin; Winchell, Jonas M; Mayer, Leonard W; Jernigan, Daniel; Mawle, Alison C.
Afiliação
  • Harvey JJ; Battelle Technical On-Site Professional Services, Atlanta, GA, 30329 USA; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA. Electronic address: xba6@cdc.gov.
  • Chester S; Association of Public Health Laboratories, Silver Spring, MD, 20904 USA.
  • Burke SA; Battelle Technical On-Site Professional Services, Atlanta, GA, 30329 USA; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Ansbro M; Battelle Technical On-Site Professional Services, Atlanta, GA, 30329 USA; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Aden T; Battelle Technical On-Site Professional Services, Atlanta, GA, 30329 USA; Association of Public Health Laboratories, Silver Spring, MD, 20904 USA.
  • Gose R; Hawaii Department of Health State Laboratories, Pearl City, HI, 96782 USA.
  • Sciulli R; Hawaii Department of Health State Laboratories, Pearl City, HI, 96782 USA.
  • Bai J; Iowa State Hygienic Laboratory, Coralville, IA, 52241 USA.
  • DesJardin L; Iowa State Hygienic Laboratory, Coralville, IA, 52241 USA.
  • Benfer JL; Iowa State Hygienic Laboratory, Coralville, IA, 52241 USA.
  • Hall J; William A. Hinton State Laboratory Institute, Jamaica Plain, MA, 02130 USA.
  • Smole S; William A. Hinton State Laboratory Institute, Jamaica Plain, MA, 02130 USA.
  • Doan K; William A. Hinton State Laboratory Institute, Jamaica Plain, MA, 02130 USA.
  • Popowich MD; Wadsworth Center, New York State Department of Health, Albany, NY, 12201-0509 USA.
  • St George K; Wadsworth Center, New York State Department of Health, Albany, NY, 12201-0509 USA.
  • Quinlan T; Wadsworth Center, New York State Department of Health, Albany, NY, 12201-0509 USA.
  • Halse TA; Wadsworth Center, New York State Department of Health, Albany, NY, 12201-0509 USA.
  • Li Z; Washington State Public Health Laboratories, Shoreline, WA, 98155-7224 USA.
  • Pérez-Osorio AC; Washington State Public Health Laboratories, Shoreline, WA, 98155-7224 USA.
  • Glover WA; Washington State Public Health Laboratories, Shoreline, WA, 98155-7224 USA.
  • Russell D; Washington State Public Health Laboratories, Shoreline, WA, 98155-7224 USA.
  • Reisdorf E; Wisconsin State Laboratory of Hygiene, Madison, WI, USA.
  • Whyte T; Wisconsin State Laboratory of Hygiene, Madison, WI, USA.
  • Whitaker B; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Hatcher C; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Srinivasan V; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Tatti K; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Tondella ML; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Wang X; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Winchell JM; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Mayer LW; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Jernigan D; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
  • Mawle AC; Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, GA, 30329-4027 USA.
J Virol Methods ; 228: 151-7, 2016 Feb.
Article em En | MEDLINE | ID: mdl-26640122
In this study, a multicenter evaluation of the Life Technologies TaqMan(®) Array Card (TAC) with 21 custom viral and bacterial respiratory assays was performed on the Applied Biosystems ViiA™ 7 Real-Time PCR System. The goal of the study was to demonstrate the analytical performance of this platform when compared to identical individual pathogen specific laboratory developed tests (LDTs) designed at the Centers for Disease Control and Prevention (CDC), equivalent LDTs provided by state public health laboratories, or to three different commercial multi-respiratory panels. CDC and Association of Public Health Laboratories (APHL) LDTs had similar analytical sensitivities for viral pathogens, while several of the bacterial pathogen APHL LDTs demonstrated sensitivities one log higher than the corresponding CDC LDT. When compared to CDC LDTs, TAC assays were generally one to two logs less sensitive depending on the site performing the analysis. Finally, TAC assays were generally more sensitive than their counterparts in three different commercial multi-respiratory panels. TAC technology allows users to spot customized assays and design TAC layout, simplify assay setup, conserve specimen, dramatically reduce contamination potential, and as demonstrated in this study, analyze multiple samples in parallel with good reproducibility between instruments and operators.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Análise de Sequência com Séries de Oligonucleotídeos / Reação em Cadeia da Polimerase em Tempo Real Tipo de estudo: Clinical_trials / Diagnostic_studies / Evaluation_studies Limite: Humans País/Região como assunto: America do norte Idioma: En Ano de publicação: 2016 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Análise de Sequência com Séries de Oligonucleotídeos / Reação em Cadeia da Polimerase em Tempo Real Tipo de estudo: Clinical_trials / Diagnostic_studies / Evaluation_studies Limite: Humans País/Região como assunto: America do norte Idioma: En Ano de publicação: 2016 Tipo de documento: Article