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rCGH: a comprehensive array-based genomic profile platform for precision medicine.
Commo, Frederic; Guinney, Justin; Ferté, Charles; Bot, Brian; Lefebvre, Celine; Soria, Jean-Charles; André, Fabrice.
Afiliação
  • Commo F; INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France, Sage Bionetworks, Seattle, WA 98109, USA and.
  • Guinney J; Sage Bionetworks, Seattle, WA 98109, USA and.
  • Ferté C; INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France, Sage Bionetworks, Seattle, WA 98109, USA and.
  • Bot B; Sage Bionetworks, Seattle, WA 98109, USA and.
  • Lefebvre C; INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France.
  • Soria JC; INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France, Department of Medical Oncology, Gustave Roussy, Villejuif 94805, France.
  • André F; INSERM U981, Gustave Roussy, University Paris-Sud, Villejuif 94805, France, Department of Medical Oncology, Gustave Roussy, Villejuif 94805, France.
Bioinformatics ; 32(9): 1402-4, 2016 05 01.
Article em En | MEDLINE | ID: mdl-26708336
UNLABELLED: We present rCGH, a comprehensive array-based comparative genomic hybridization analysis workflow, integrating computational improvements and functionalities specifically designed for precision medicine. rCGH supports the major microarray platforms, ensures a full traceability and facilitates profiles interpretation and decision-making through sharable interactive visualizations. AVAILABILITY AND IMPLEMENTATION: The rCGH R package is available on bioconductor (under Artistic-2.0). The aCGH-viewer is available at https://fredcommo.shinyapps.io/aCGH_viewer, and the application implementation is freely available for installation at https://github.com/fredcommo/aCGH_viewer CONTACT: frederic.commo@gustaveroussy.fr SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genômica / Hibridização Genômica Comparativa / Medicina de Precisão Limite: Humans Idioma: En Ano de publicação: 2016 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genômica / Hibridização Genômica Comparativa / Medicina de Precisão Limite: Humans Idioma: En Ano de publicação: 2016 Tipo de documento: Article