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2D lattice model of a lipid bilayer: Microscopic derivation and thermodynamic exploration.
Hakobyan, Davit; Heuer, Andreas.
Afiliação
  • Hakobyan D; Institute of Physical Chemistry, WWU Münster, Corrensstr. 28/30, 48149 Münster, Germany and Center for Multiscale Theory and Computation (CMTC), WWU Münster, 48149 Münster, Germany.
  • Heuer A; Institute of Physical Chemistry, WWU Münster, Corrensstr. 28/30, 48149 Münster, Germany and Center for Multiscale Theory and Computation (CMTC), WWU Münster, 48149 Münster, Germany.
J Chem Phys ; 146(6): 064305, 2017 Feb 14.
Article em En | MEDLINE | ID: mdl-28201915
Based on all-atom Molecular Dynamics (MD) simulations of a lipid bilayer we present a systematic mapping on a 2D lattice model. Keeping the lipid type and the chain order parameter as key variables we derive a free energy functional, containing the enthalpic interaction of adjacent lipids as well as the tail entropy. The functional form of both functions is explicitly determined for saturated and polyunsaturated lipids. By studying the lattice model via Monte Carlo simulations it is possible to reproduce the temperature dependence of the distribution of order parameters of the pure lipids, including the prediction of the gel transition. Furthermore, application to a mixture of saturated and polyunsaturated lipids yields the correct phase separation behavior at lower temperatures with a simulation time reduced by approximately 7 orders of magnitude as compared to the corresponding MD simulations. Even the time-dependence of the de-mixing is reproduced on a semi-quantitative level. Due to the generality of the approach we envisage a large number of further applications, ranging from modeling larger sets of lipids, sterols, and solvent proteins to predicting nucleation barriers for the melting of lipids. Particularly, from the properties of the 2D lattice model one can directly read off the enthalpy and entropy change of the 1,2-dipalmitoyl-sn-glycero-3-phosphocholine gel-to-liquid transition in excellent agreement with experimental and MD results.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Termodinâmica / 1,2-Dipalmitoilfosfatidilcolina / Bicamadas Lipídicas Tipo de estudo: Health_economic_evaluation / Prognostic_studies Idioma: En Ano de publicação: 2017 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Termodinâmica / 1,2-Dipalmitoilfosfatidilcolina / Bicamadas Lipídicas Tipo de estudo: Health_economic_evaluation / Prognostic_studies Idioma: En Ano de publicação: 2017 Tipo de documento: Article