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Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica).
Grenville-Briggs, Laura J; Kushwaha, Sandeep K; Cleary, Michelle R; Witzell, Johanna; Savenkov, Eugene I; Whisson, Stephen C; Chawade, Aakash; Vetukuri, Ramesh R.
Afiliação
  • Grenville-Briggs LJ; Department of Plant Protection biology, Swedish University of Agricultural Sciences, Alnarp, Sweden.
  • Kushwaha SK; Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden.
  • Cleary MR; National Bioinformatics Infrastructure Sweden (NBIS), Department of Biology, Lund University, Lund, Sweden.
  • Witzell J; Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences, Alnarp, Sweden.
  • Savenkov EI; Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences, Alnarp, Sweden.
  • Whisson SC; Department of Plant Biology, Uppsala BioCenter, Linnean Centre of Plant Biology, Swedish University of Agricultural Sciences, Uppsala, Sweden.
  • Chawade A; Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, United Kingdom.
  • Vetukuri RR; Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden.
Genom Data ; 12: 155-156, 2017 Jun.
Article em En | MEDLINE | ID: mdl-28560165
ABSTRACT
Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2017 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2017 Tipo de documento: Article