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Whole exome and whole genome sequencing with dried blood spot DNA without whole genome amplification.
Bassaganyas, Laia; Freedman, George; Vaka, Dedeepya; Wan, Eunice; Lao, Richard; Chen, Flavia; Kvale, Mark; Currier, Robert J; Puck, Jennifer M; Kwok, Pui-Yan.
Afiliação
  • Bassaganyas L; Cardiovascular Research Institute, University of California, San Francisco, California.
  • Freedman G; Department of Pediatrics, University of California, San Francisco, California.
  • Vaka D; Institute for Human Genetics, University of California, San Francisco, California.
  • Wan E; Institute for Human Genetics, University of California, San Francisco, California.
  • Lao R; Institute for Human Genetics, University of California, San Francisco, California.
  • Chen F; Institute for Human Genetics, University of California, San Francisco, California.
  • Kvale M; Institute for Human Genetics, University of California, San Francisco, California.
  • Currier RJ; Genetic Disease Screening Program, California Department of Public Health, Richmond, California.
  • Puck JM; Department of Pediatrics, University of California, San Francisco, California.
  • Kwok PY; Institute for Human Genetics, University of California, San Francisco, California.
Hum Mutat ; 39(1): 167-171, 2018 01.
Article em En | MEDLINE | ID: mdl-29067733
Newborn screening (NBS) for rare conditions is performed in all 50 states in the USA. We have partnered with the California Department of Public Health Genetic Disease Laboratory to determine whether sufficient DNA can be extracted from archived dried blood spots (DBS) for next-generation sequencing in the hopes that next-generation sequencing can play a role in NBS. We optimized the DNA extraction and sequencing library preparation protocols for residual infant DBS archived over 20 years ago and successfully obtained acceptable whole exome and whole genome sequencing data. This sequencing study using DBS DNA without whole genome amplification prior to sequencing library preparation provides evidence that properly stored residual newborn DBS are a satisfactory source of DNA for genetic studies.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Teste em Amostras de Sangue Seco / Sequenciamento Completo do Genoma / Sequenciamento do Exoma Limite: Humans Idioma: En Ano de publicação: 2018 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Teste em Amostras de Sangue Seco / Sequenciamento Completo do Genoma / Sequenciamento do Exoma Limite: Humans Idioma: En Ano de publicação: 2018 Tipo de documento: Article