SciApps: a cloud-based platform for reproducible bioinformatics workflows.
Bioinformatics
; 34(22): 3917-3920, 2018 11 15.
Article
em En
| MEDLINE
| ID: mdl-29897418
ABSTRACT
Motivation The rapid accumulation of both sequence and phenotype data generated by high-throughput methods has increased the need to store and analyze data on distributed storage and computing systems. Efficient data management across these heterogeneous systems requires a workflow management system to simplify the task of analysis through automation and make large-scale bioinformatics analyses accessible and reproducible. Results:
We developed SciApps, a web-based platform for reproducible bioinformatics workflows. The platform is designed to automate the execution of modular Agave apps and support execution of workflows on local clusters or in a cloud. Two workflows, one for association and one for annotation, are provided as exemplar scientific use cases. Availability and implementation https//www.sciapps.org. Supplementary information Supplementary data are available at Bioinformatics online.
Texto completo:
1
Coleções:
01-internacional
Base de dados:
MEDLINE
Assunto principal:
Biologia Computacional
/
Fluxo de Trabalho
Idioma:
En
Ano de publicação:
2018
Tipo de documento:
Article