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A closely-related clade of globally distributed bloom-forming cyanobacteria within the Nostocales.
Driscoll, Connor B; Meyer, Kevin A; Sulcius, Sigitas; Brown, Nathan M; Dick, Gregory J; Cao, Huansheng; Gasiunas, Giedrius; Timinskas, Albertas; Yin, Yanbin; Landry, Zachary C; Otten, Timothy G; Davis, Timothy W; Watson, Susan B; Dreher, Theo W.
Afiliação
  • Driscoll CB; Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA.
  • Meyer KA; Department of Earth & Environmental Sciences, University of Michigan, Ann Arbor, MI 48109-1005, USA; Cooperative Institute for Great Lakes Research (CIGLR), University of Michigan, Ann Arbor, MI 48109-1005, USA.
  • Sulcius S; Laboratory of Algology and Microbial Ecology, Akademijos Str. 2, LT-08412, Vilnius, Lithuania.
  • Brown NM; Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA.
  • Dick GJ; Department of Earth & Environmental Sciences, University of Michigan, Ann Arbor, MI 48109-1005, USA.
  • Cao H; Biodesign Center for Fundamental and Applied Microbiomics, Arizona State University, 427 E Tyler Mall, Tempe, AZ 85287, USA.
  • Gasiunas G; Department of Protein-DNA Interactions, Institute of Biotechnology, Vilnius University, Sauletekio av. 7, LT-10257, Vilnius, Lithuania.
  • Timinskas A; Department of Bioinformatics, Institute of Biotechnology, Vilnius University, Sauletekio 7, LT-10257 Vilnius, Lithuania.
  • Yin Y; Department of Biological Sciences, Northern Illinois University, DeKalb, IL, USA.
  • Landry ZC; Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA.
  • Otten TG; Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA.
  • Davis TW; Department of Biological Sciences, Bowling Green State University, Bowling Green, OH 43402, USA.
  • Watson SB; Environment and Climate Change Canada, Canada Centre for Inland Waters, Burlington, ON L7S 1A1, Canada.
  • Dreher TW; Department of Microbiology, Oregon State University, 226 Nash Hall, Corvallis, OR, 97331, USA; Center for Genome Research and Biocomputing, Oregon State University, Corvallis, OR 97331, USA. Electronic address: theo.dreher@oregonstate.edu.
Harmful Algae ; 77: 93-107, 2018 07.
Article em En | MEDLINE | ID: mdl-30005805
ABSTRACT
In order to better understand the relationships among current Nostocales cyanobacterial blooms, eight genomes were sequenced from cultured isolates or from environmental metagenomes of recent planktonic Nostocales blooms. Phylogenomic analysis of publicly available sequences placed the new genomes among a group of 15 genomes from four continents in a distinct ADA clade (Anabaena/Dolichospermum/Aphanizomenon) within the Nostocales. This clade contains four species-level groups, two of which include members with both Anabaena-like and Aphanizomenon flos-aquae-like morphology. The genomes contain many repetitive genetic elements and a sizable pangenome, in which ABC-type transporters are highly represented. Alongside common core genes for photosynthesis, the differentiation of N2-fixing heterocysts, and the uptake and incorporation of the major nutrients P, N and S, we identified several gene pathways in the pangenome that may contribute to niche partitioning. Genes for problematic secondary metabolites-cyanotoxins and taste-and-odor compounds-were sporadically present, as were other polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) gene clusters. By contrast, genes predicted to encode the ribosomally generated bacteriocin peptides were found in all genomes.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genoma Bacteriano / Cianobactérias Idioma: En Ano de publicação: 2018 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genoma Bacteriano / Cianobactérias Idioma: En Ano de publicação: 2018 Tipo de documento: Article