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Decoding the ocean's microbiological secrets for marine enzyme biodiscovery.
Ferrer, Manuel; Méndez-García, Celia; Bargiela, Rafael; Chow, Jennifer; Alonso, Sandra; García-Moyano, Antonio; Bjerga, Gro E K; Steen, Ida H; Schwabe, Tatjana; Blom, Charlotte; Vester, Jan; Weckbecker, Andrea; Shahgaldian, Patrick; de Carvalho, Carla C C R; Meskys, Rolandas; Zanaroli, Giulio; Glöckner, Frank O; Fernández-Guerra, Antonio; Thambisetty, Siva; de la Calle, Fernando; Golyshina, Olga V; Yakimov, Michail M; Jaeger, Karl-Erich; Yakunin, Alexander F; Streit, Wolfgang R; McMeel, Oonagh; Calewaert, Jan-Bart; Tonné, Nathalie; Golyshin, Peter N.
Afiliação
  • Ferrer M; Department of Applied Biocatalysis, Institute of Catalysis, Consejo Superior de Investigaciones Científicas, Marie Curie 2, 28049 Madrid, Spain.
  • Méndez-García C; Department of Applied Biocatalysis, Institute of Catalysis, Consejo Superior de Investigaciones Científicas, Marie Curie 2, 28049 Madrid, Spain.
  • Bargiela R; School of Natural Sciences, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
  • Chow J; Biozentrum Klein Flottbek, Mikrobiologie & Biotechnologie, Universität Hamburg, Ohnhorststr. 18, 22609 Hamburg, Germany.
  • Alonso S; Department of Applied Biocatalysis, Institute of Catalysis, Consejo Superior de Investigaciones Científicas, Marie Curie 2, 28049 Madrid, Spain.
  • García-Moyano A; NORCE Environment, NORCE Norwegian Research Centre AS, Thormøhlens gate 55, 5008 Bergen, Norway.
  • Bjerga GEK; NORCE Environment, NORCE Norwegian Research Centre AS, Thormøhlens gate 55, 5008 Bergen, Norway.
  • Steen IH; Department of Biological Sciences and KG Jebsen Centre for Deep Sea Research, University of Bergen, Thormøhlensgt 53A/B, 5020 Bergen, Norway.
  • Schwabe T; CLIB2021 - Cluster industrielle Biotechnologie, Voelklinger Str. 4, 40219 Düsseldorf, Germany.
  • Blom C; Novozymes A/S, Krogshoejvej 36, 2880 Bagsvaerd, Denmark.
  • Vester J; Novozymes A/S, Krogshoejvej 36, 2880 Bagsvaerd, Denmark.
  • Weckbecker A; evoxx technologies GmbH, Alfred-Nobel-Str. 10, 40789 Monheim am Rhein, Germany.
  • Shahgaldian P; School of Life Sciences, University of Applied Sciences and Arts Northwestern Switzerland, Hofackerstrasse 35, CH-4132 Muttenz, Switzerland.
  • de Carvalho CCCR; iBB - Institute for Bioengineering and Biosciences, Department of Bioengineering, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisboa, Portugal.
  • Meskys R; Department of Molecular Microbiology and Biotechnology, Institute of Biochemistry, Life Sciences Center, Vilnius University, Sauletekio 7, LT-10257 Vilnius, Lithuania.
  • Zanaroli G; Department of Civil, Chemical, Environmental and Materials Engineering (DICAM), University of Bologna, via Terracini 28, 40131 Bologna, Italy.
  • Glöckner FO; Jacobs University Bremen gGmbH, Campus Ring 1, 28759 Bremen, Germany.
  • Fernández-Guerra A; Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Celsiusstrasse 1, 28359 Bremen, Germany.
  • Thambisetty S; Jacobs University Bremen gGmbH, Campus Ring 1, 28759 Bremen, Germany.
  • de la Calle F; London School of Economics and Political Science, Houghton Street, WC2A 2AE London, United Kingdom.
  • Golyshina OV; Microbiology R&D Dpt., Pharma Mar, S.A., Avda. Los Reyes, 1, 28770 Colmenar Viejo, Madrid, Spain.
  • Yakimov MM; School of Natural Sciences, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
  • Jaeger KE; Centre for Environmental Biotechnology, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
  • Yakunin AF; Institute for Biological Resources and Marine Biotechnology, IRBIM-CNR, Spianata S. Raineri 86, 98122 Messina, Italy.
  • Streit WR; Institute of Living Systems, Immanuel Kant Baltic Federal University, Nevskogo 14 a, 236016 Kaliningrad, Russia.
  • McMeel O; Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf and Forschungszentrum Jülich GmbH, Wilhelm-Johnen-Strasse, 52428 Jülich, Germany.
  • Calewaert JB; School of Natural Sciences, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
  • Tonné N; Centre for Environmental Biotechnology, Bangor University, Deiniol Road, LL57 2UW Bangor, United Kingdom.
  • Golyshin PN; Department of Chemical Engineering and Applied Chemistry, University of Toronto, 200 College Street, Toronto, M5S 3E5 Ontario, Canada.
FEMS Microbiol Lett ; 366(1)2019 01 01.
Article em En | MEDLINE | ID: mdl-30534987
A global census of marine microbial life has been underway over the past several decades. During this period, there have been scientific breakthroughs in estimating microbial diversity and understanding microbial functioning and ecology. It is estimated that the ocean, covering 71% of the earth's surface with its estimated volume of about 2 × 1018 m3 and an average depth of 3800 m, hosts the largest population of microbes on Earth. More than 2 million eukaryotic and prokaryotic species are thought to thrive both in the ocean and on its surface. Prokaryotic cell abundances can reach densities of up to 1012 cells per millilitre, exceeding eukaryotic densities of around 106 cells per millilitre of seawater. Besides their large numbers and abundance, marine microbial assemblages and their organic catalysts (enzymes) have a largely underestimated value for their use in the development of industrial products and processes. In this perspective article, we identified critical gaps in knowledge and technology to fast-track this development. We provided a general overview of the presumptive microbial assemblages in oceans, and an estimation of what is known and the enzymes that have been currently retrieved. We also discussed recent advances made in this area by the collaborative European Horizon 2020 project 'INMARE'.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Microbiologia da Água / Oceanos e Mares / Organismos Aquáticos Idioma: En Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Microbiologia da Água / Oceanos e Mares / Organismos Aquáticos Idioma: En Ano de publicação: 2019 Tipo de documento: Article