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Discovery of Cucumis melo endornavirus by deep sequencing of human stool samples in Brazil.
da Costa, Antonio Charlys; Leal, Elcio; Gill, Danielle; Milagres, Flavio Augusto de Pádua; Komninakis, Shirley Vasconcelos; Brustulin, Rafael; Teles, Maria da Aparecida Rodrigues; Lobato, Márcia Cristina Alves Brito Sayão; das Chagas, Rogério Togisaki; Abrão, Maria de Fátima Neves Dos Santos; Soares, Cassia Vitória de Deus Alves; Deng, Xutao; Delwart, Eric; Sabino, Ester Cerdeira; Luchs, Adriana.
Afiliação
  • da Costa AC; Institute of Tropical Medicine, University of São Paulo, Av. Dr. Enéas de Carvalho Aguiar, no 470, São Paulo, São Paulo, 05403-000, Brazil. charlysbr@yahoo.com.br.
  • Leal E; LIM/46, Faculty of Medicine, University of São Paulo, São Paulo, Brazil. charlysbr@yahoo.com.br.
  • Gill D; Institute of Biological Sciences, Federal University of Pará, Belém do Pará, Brazil.
  • Milagres FAP; Institute of Tropical Medicine, University of São Paulo, Av. Dr. Enéas de Carvalho Aguiar, no 470, São Paulo, São Paulo, 05403-000, Brazil.
  • Komninakis SV; LIM/46, Faculty of Medicine, University of São Paulo, São Paulo, Brazil.
  • Brustulin R; Federal University of Tocantins, Palmas, Brazil.
  • Teles MDAR; Public Health Laboratory of Tocantins State (LACEN/TO), Palmas, Brazil.
  • Lobato MCABS; Secretary of Health of Tocantins, Palmas, Brazil.
  • das Chagas RT; Postgraduate Program in Health Science, Faculty of Medicine of ABC, Santo André, Brazil.
  • Abrão MFNDS; Retrovirology Laboratory, Federal University of São Paulo, São Paulo, São Paulo, Brazil.
  • Soares CVDA; Federal University of Tocantins, Palmas, Brazil.
  • Deng X; Public Health Laboratory of Tocantins State (LACEN/TO), Palmas, Brazil.
  • Delwart E; Secretary of Health of Tocantins, Palmas, Brazil.
  • Sabino EC; Public Health Laboratory of Tocantins State (LACEN/TO), Palmas, Brazil.
  • Luchs A; Secretary of Health of Tocantins, Palmas, Brazil.
Virus Genes ; 55(3): 332-338, 2019 Jun.
Article em En | MEDLINE | ID: mdl-30915664
ABSTRACT
The nearly complete genome sequences of two Cucumis melo endornavirus (CmEV) strains were obtained using deep sequencing while investigating fecal samples for the presence of gastroenteritis viruses. The Brazilian CmEV BRA/TO-23 (aa positions 116-5027) and BRA/TO-74 (aa positions 26-5057) strains were nearly identical to the reference CmEV CL-01 (USA) and SJ1 (South Korea) strains, showing 97% and 98% of nucleotide and amino acid identity, respectively. Endornaviruses are not known to be associated with human disease and their presence may simply reflect recent dietary consumption. Metagenomic analyses offered an opportunity to identify for the first time in Brazil a newly described endornavirus species.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Doenças das Plantas / Vírus de RNA / Genoma Viral / Cucumis melo Limite: Humans País/Região como assunto: America do sul / Brasil Idioma: En Ano de publicação: 2019 Tipo de documento: Article
Texto completo
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XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Doenças das Plantas / Vírus de RNA / Genoma Viral / Cucumis melo Limite: Humans País/Região como assunto: America do sul / Brasil Idioma: En Ano de publicação: 2019 Tipo de documento: Article