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Exome-based search for recurrent disease-causing alleles in Russian population.
Yanus, Grigoriy A; Akhapkina, Tatiana A; Whitehead, Aldon J; Bizin, Ilya V; Iyevleva, Aglaya G; Kuligina, Ekaterina Sh; Aleksakhina, Svetlana N; Anisimova, Maria O; Holmatov, Maxim M; Romanko, Alexandr A; Zaitseva, Olga A; Yatsuk, Olga S; Zagorodnev, Kirill A; Matsneva, Maria A; Koloskov, Andrey V; Togo, Alexandr V; Suspitsin, Evgeny N; Imyanitov, Evgeny N.
Afiliação
  • Yanus GA; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia. Electronic address: octavedoctor@yandex.ru.
  • Akhapkina TA; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Whitehead AJ; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Bizin IV; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Iyevleva AG; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Kuligina ES; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Aleksakhina SN; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Anisimova MO; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Holmatov MM; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Romanko AA; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Zaitseva OA; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Yatsuk OS; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Zagorodnev KA; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia.
  • Matsneva MA; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Koloskov AV; City Hospital 26, 196247, St. Petersburg, Russia.
  • Togo AV; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Suspitsin EN; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia.
  • Imyanitov EN; St. Petersburg Pediatric Medical University, 194100, St. Petersburg, Russia; N.N. Petrov Institute of Oncology, 197758, St. Petersburg, Russia; I.I. Mechnikov North-Western Medical University, 191015, St. Petersburg, Russia; St. Petersburg State University, 199034, St. Petersburg, Russia.
Eur J Med Genet ; 62(7): 103656, 2019 Jul.
Article em En | MEDLINE | ID: mdl-31028847
Exomes of 27 Russian subjects were analyzed for the presence of medically relevant alleles, such as protein-truncating variants (PTVs) in known recessive disease-associated genes and pathogenic missense mutations included in the ClinVar database. 36 variants (24 PTVs and 12 amino acid substitutions) were identified and then subjected to the analysis in 897 population controls. 9/36 mutations were novel, however only two of them (POLH c.490delG associated with xeroderma pigmentosum variant (XPV) and CATSPER1 c.859_860delCA responsible for spermatogenic failure) were shown to be recurrent. 27 out of 36 pathogenic alleles were already described in prior genetic studies; seven of them occurred only in the index cases, while 20 demonstrated evidence for persistence in Russian population. In particular, non-random occurrence was revealed for SERPINA1 c.1096G > A (alpha-1 antitrypsin deficiency), C8B c.1282C > T and c.1653G > A (complement component 8B deficiency), ATP7B c.3207C > A (Wilson disease), PROP1 c.301_302delAG (combined pituitary hormone deficiency), CYP21A2 c.844G > T (non-classical form of adrenogenital syndrome), EYS c.1155T > A (retinitis pigmentosa), HADHA c.1528G > C (LCHAD deficiency), SCO2 c.418G > A (cytochrome c oxidase deficiency), OTOA c.2359G > T (sensorineural deafness), C2 c.839_866del (complement component 2 deficiency), ACADVL c.848T > C (VLCAD deficiency), TGM5 c.337G > T (acral peeling skin syndrome) and VWF c.2561 G > A (von Willebrand disease, type 2N). These data deserve to be considered in future medical genetic activities.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: População / Predisposição Genética para Doença / Taxa de Mutação / Exoma Limite: Humans País/Região como assunto: Asia / Europa Idioma: En Ano de publicação: 2019 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: População / Predisposição Genética para Doença / Taxa de Mutação / Exoma Limite: Humans País/Região como assunto: Asia / Europa Idioma: En Ano de publicação: 2019 Tipo de documento: Article