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Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues.
Meehan, Conor J; Goig, Galo A; Kohl, Thomas A; Verboven, Lennert; Dippenaar, Anzaan; Ezewudo, Matthew; Farhat, Maha R; Guthrie, Jennifer L; Laukens, Kris; Miotto, Paolo; Ofori-Anyinam, Boatema; Dreyer, Viola; Supply, Philip; Suresh, Anita; Utpatel, Christian; van Soolingen, Dick; Zhou, Yang; Ashton, Philip M; Brites, Daniela; Cabibbe, Andrea M; de Jong, Bouke C; de Vos, Margaretha; Menardo, Fabrizio; Gagneux, Sebastien; Gao, Qian; Heupink, Tim H; Liu, Qingyun; Loiseau, Chloé; Rigouts, Leen; Rodwell, Timothy C; Tagliani, Elisa; Walker, Timothy M; Warren, Robin M; Zhao, Yanlin; Zignol, Matteo; Schito, Marco; Gardy, Jennifer; Cirillo, Daniela M; Niemann, Stefan; Comas, Inaki; Van Rie, Annelies.
Afiliação
  • Meehan CJ; Unit of Mycobacteriology, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
  • Goig GA; Institute of Biomedicine of Valencia, CSIC, Valencia, Spain.
  • Kohl TA; Molecular and Experimental Mycobacteriology, Priority Area Infections, Research Center Borstel, Borstel, Germany.
  • Verboven L; German Center for Infection Research, Partner Site Hamburg-Lübeck-Borstel-Riems, Borstel, Germany.
  • Dippenaar A; Tuberculosis Omics Research Consortium, Department of Epidemiology and Social Medicine, Institute of Global Health, Faculty of Medicine and Health Sciences, University of Antwerp, Antwerp, Belgium.
  • Ezewudo M; DST-NRF Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town, South Africa.
  • Farhat MR; Critical Path Institute, Tucson, AZ, USA.
  • Guthrie JL; Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA.
  • Laukens K; Pulmonary and Critical Care Medicine, Massachusetts General Hospital, Boston, MA, USA.
  • Miotto P; University of British Columbia, Vancouver, Canada.
  • Ofori-Anyinam B; Adrem Data Laboratory, Department of Mathematics and Computer Science, University of Antwerp, Antwerp, Belgium.
  • Dreyer V; Emerging Bacterial Pathogens Unit, Division of Immunology, Transplantation and Infectious Diseases, IRCCS San Raffaele Scientific Institute, Milan, Italy.
  • Supply P; Center for Global Health Security and Diplomacy, Ottawa, Canada.
  • Suresh A; Food and Drugs Authority, Accra, Ghana.
  • Utpatel C; Molecular and Experimental Mycobacteriology, Priority Area Infections, Research Center Borstel, Borstel, Germany.
  • van Soolingen D; German Center for Infection Research, Partner Site Hamburg-Lübeck-Borstel-Riems, Borstel, Germany.
  • Zhou Y; University of Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, Lille, France.
  • Ashton PM; U1019 - UMR 8204, Center for Infection and Immunity of Lille, Lille, France.
  • Brites D; Foundation for Innovative New Diagnostics, Geneva, Switzerland.
  • Cabibbe AM; Molecular and Experimental Mycobacteriology, Priority Area Infections, Research Center Borstel, Borstel, Germany.
  • de Jong BC; German Center for Infection Research, Partner Site Hamburg-Lübeck-Borstel-Riems, Borstel, Germany.
  • de Vos M; National Tuberculosis Reference Laboratory, Centre for Infectious Disease Control, National Institute for Public Health and the Environment (RIVM), Bilthoven, Netherlands.
  • Menardo F; National Center for Tuberculosis Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
  • Gagneux S; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.
  • Gao Q; Swiss Tropical and Public Health Institute, Basel, Switzerland.
  • Heupink TH; University of Basel, Basel, Switzerland.
  • Liu Q; Emerging Bacterial Pathogens Unit, Division of Immunology, Transplantation and Infectious Diseases, IRCCS San Raffaele Scientific Institute, Milan, Italy.
  • Loiseau C; Unit of Mycobacteriology, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
  • Rigouts L; Tuberculosis Omics Research Consortium, Department of Epidemiology and Social Medicine, Institute of Global Health, Faculty of Medicine and Health Sciences, University of Antwerp, Antwerp, Belgium.
  • Rodwell TC; Swiss Tropical and Public Health Institute, Basel, Switzerland.
  • Tagliani E; University of Basel, Basel, Switzerland.
  • Walker TM; Swiss Tropical and Public Health Institute, Basel, Switzerland.
  • Warren RM; University of Basel, Basel, Switzerland.
  • Zhao Y; Key Laboratory of Medical Molecular Virology, Ministry of Education and Health, School of Basic Medical Sciences, Fudan University, Shanghai, China.
  • Zignol M; Tuberculosis Omics Research Consortium, Department of Epidemiology and Social Medicine, Institute of Global Health, Faculty of Medicine and Health Sciences, University of Antwerp, Antwerp, Belgium.
  • Schito M; Key Laboratory of Medical Molecular Virology, Ministry of Education and Health, School of Basic Medical Sciences, Fudan University, Shanghai, China.
  • Gardy J; Swiss Tropical and Public Health Institute, Basel, Switzerland.
  • Cirillo DM; University of Basel, Basel, Switzerland.
  • Niemann S; Unit of Mycobacteriology, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
  • Comas I; Foundation for Innovative New Diagnostics, Geneva, Switzerland.
  • Van Rie A; Emerging Bacterial Pathogens Unit, Division of Immunology, Transplantation and Infectious Diseases, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Nat Rev Microbiol ; 17(9): 533-545, 2019 09.
Article em En | MEDLINE | ID: mdl-31209399
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Tuberculose / Biologia Computacional / Sequenciamento Completo do Genoma / Mycobacterium tuberculosis Tipo de estudo: Diagnostic_studies / Guideline Limite: Humans Idioma: En Ano de publicação: 2019 Tipo de documento: Article
Texto completo
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PubMed Links
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Tuberculose / Biologia Computacional / Sequenciamento Completo do Genoma / Mycobacterium tuberculosis Tipo de estudo: Diagnostic_studies / Guideline Limite: Humans Idioma: En Ano de publicação: 2019 Tipo de documento: Article