Impact of Sodium Cationization on Gas-Phase Conformations of DNA and RNA Cytidine Mononucleotides.

Hamlow, L A; Nei, Y-W; Wu, R R; Gao, J; Steill, J D; Berden, G; Oomens, J; Rodgers, M T

Hamlow, L A; Nei, Y-W; Wu, R R; Gao, J; Steill, J D; Berden, G; Oomens, J; Rodgers, M T.

Afiliação

Hamlow LA; Department of Chemistry, Wayne State University, 5101 Cass Ave, Detroit, MI, 48202, USA.
Nei YW; Department of Chemistry, Wayne State University, 5101 Cass Ave, Detroit, MI, 48202, USA.
Wu RR; Department of Chemistry, Wayne State University, 5101 Cass Ave, Detroit, MI, 48202, USA.
Gao J; Institute for Molecules and Materials, FELIX Laboratory, Radboud University, Toernooiveld 7c, 6525 ED, Nijmegen, Netherlands.
Steill JD; Institute for Molecules and Materials, FELIX Laboratory, Radboud University, Toernooiveld 7c, 6525 ED, Nijmegen, Netherlands.
Berden G; Institute for Molecules and Materials, FELIX Laboratory, Radboud University, Toernooiveld 7c, 6525 ED, Nijmegen, Netherlands.
Oomens J; Institute for Molecules and Materials, FELIX Laboratory, Radboud University, Toernooiveld 7c, 6525 ED, Nijmegen, Netherlands.
Rodgers MT; Department of Chemistry, Wayne State University, 5101 Cass Ave, Detroit, MI, 48202, USA. mrodgers@chem.wayne.edu.

J Am Soc Mass Spectrom ; 30(9): 1758-1767, 2019 Sep.

Article em En | MEDLINE | ID: mdl-31286444

Assuntos

Citidina/química; DNA/química; RNA/química; Sódio/química; Espectrofotometria Infravermelho/métodos; Cátions Monovalentes/química; Monofosfato de Citidina/química; Desoxicitidina Monofosfato/química; Gases/química; Conformação de Ácido Nucleico

Palavras-chave

2'-Deoxycytidine (dCyd); 2'-Deoxycytidine-5'-monophosphate (pdCyd); Cytidine (Cyd); Cytidine-5'-monophosphate (pCyd); Density functional theory (DFT); Electronic structure calculations; Electrospray ionization (ESI); Fourier transform ion cyclotron resonance mass spectrometer (FT-ICR MS); Gas-phase conformation; Hydrogen-bonding interactions; Hydrogen-stretching region; IR fingerprint region; IR spectrum; IRMPD spectrum; Infrared multiple photon dissociation (IRMPD) action spectroscopy; Mononucleotide; Nucleobase; Nucleobase orientation; Nucleoside; Phosphate moiety; Protonation; Quadrupole ion trap mass spectrometer (QIT MS); Simulated annealing; Sodium cationization; Sugar puckering; Tandem mass spectrometry

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Sódio / Espectrofotometria Infravermelho / DNA / RNA / Citidina Idioma: En Ano de publicação: 2019 Tipo de documento: Article

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