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Hierarchical Hidden Markov models enable accurate and diverse detection of antimicrobial resistance sequences.
Lakin, Steven M; Kuhnle, Alan; Alipanahi, Bahar; Noyes, Noelle R; Dean, Chris; Muggli, Martin; Raymond, Rob; Abdo, Zaid; Prosperi, Mattia; Belk, Keith E; Morley, Paul S; Boucher, Christina.
Afiliação
  • Lakin SM; 1Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO 80523 USA.
  • Kuhnle A; 2Department of Computer and Information Science and Engineering, University of Florida, Gainesville, FL 32611 USA.
  • Alipanahi B; 2Department of Computer and Information Science and Engineering, University of Florida, Gainesville, FL 32611 USA.
  • Noyes NR; 3Department of Veterinary Population Medicine, University of Minnesota, St. Paul, MN 55108 USA.
  • Dean C; 1Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO 80523 USA.
  • Muggli M; 4Department of Computer Science, Colorado State University, Fort Collins, CO 80523 USA.
  • Raymond R; 4Department of Computer Science, Colorado State University, Fort Collins, CO 80523 USA.
  • Abdo Z; 1Department of Microbiology, Immunology, and Pathology, Colorado State University, Fort Collins, CO 80523 USA.
  • Prosperi M; 5Department of Epidemiology, University of Florida, Gainesville, FL 32611 USA.
  • Belk KE; 6Department of Animal Sciences, Colorado State University, Fort Collins, CO 80523 USA.
  • Morley PS; 7VERO Center, Texas A&M University and West Texas A&M University, Canyon, TX 79016 USA.
  • Boucher C; 2Department of Computer and Information Science and Engineering, University of Florida, Gainesville, FL 32611 USA.
Commun Biol ; 2: 294, 2019.
Article em En | MEDLINE | ID: mdl-31396574
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Resistência Microbiana a Medicamentos / Cadeias de Markov / Análise de Sequência de DNA / Bases de Dados Genéticas / Metagenômica / Mineração de Dados / Sequenciamento de Nucleotídeos em Larga Escala / Aprendizado de Máquina Tipo de estudo: Diagnostic_studies / Health_economic_evaluation / Prognostic_studies Idioma: En Ano de publicação: 2019 Tipo de documento: Article
Texto completo
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XML
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Resistência Microbiana a Medicamentos / Cadeias de Markov / Análise de Sequência de DNA / Bases de Dados Genéticas / Metagenômica / Mineração de Dados / Sequenciamento de Nucleotídeos em Larga Escala / Aprendizado de Máquina Tipo de estudo: Diagnostic_studies / Health_economic_evaluation / Prognostic_studies Idioma: En Ano de publicação: 2019 Tipo de documento: Article