Your browser doesn't support javascript.
loading
A Chromosome-Scale Genome Assembly Resource for Myriosclerotinia sulcatula Infecting Sedge Grass (Carex sp.).
Kusch, Stefan; Ibrahim, Heba M M; Zanchetta, Catherine; Lopez-Roques, Celine; Donnadieu, Cecile; Raffaele, Sylvain.
Afiliação
  • Kusch S; Laboratoire des Interactions Plantes-Microorganismes (LIPM), INRA, CNRS, 24 Chemin de Borde Rouge - Auzeville, CS52627, F31326 Castanet Tolosan Cedex, France.
  • Ibrahim HMM; Laboratoire des Interactions Plantes-Microorganismes (LIPM), INRA, CNRS, 24 Chemin de Borde Rouge - Auzeville, CS52627, F31326 Castanet Tolosan Cedex, France.
  • Zanchetta C; Department of Genetics, Faculty of Agriculture, Cairo University, Gammaa St., 12613 Giza, Egypt.
  • Lopez-Roques C; INRAE, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
  • Donnadieu C; INRAE, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
  • Raffaele S; INRAE, US 1426, GeT-PlaGe, Genotoul, Castanet-Tolosan, France.
Mol Plant Microbe Interact ; 33(7): 880-883, 2020 Jul.
Article em En | MEDLINE | ID: mdl-32310704
ABSTRACT
The fungus Myriosclerotinia sulcatula is a close relative of the notorious polyphagous plant pathogens Botrytis cinerea and Sclerotinia sclerotiorum but exhibits a host range restricted to plants from the Carex genus (Cyperaceae family). To date, there are no genomic resources available for fungi in the Myriosclerotinia genus. Here, we present a chromosome-scale reference genome assembly for M. sulcatula. The assembly contains 24 contigs with a total length of 43.53 Mbp, with scaffold N50 of 2,649.7 kbp and N90 of 1,133.1 kbp. BRAKER-predicted gene models were manually curated using WebApollo, resulting in 11,275 protein-coding genes that we functionally annotated. We provide a high-quality reference genome assembly and annotation for M. sulcatula as a resource for studying evolution and pathogenicity in fungi from the Sclerotiniaceae family.
Assuntos
Palavras-chave

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Doenças das Plantas / Ascomicetos / Genoma Fúngico / Carex (Planta) Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Doenças das Plantas / Ascomicetos / Genoma Fúngico / Carex (Planta) Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2020 Tipo de documento: Article