A scalable SCENIC workflow for single-cell gene regulatory network analysis.

Van de Sande, Bram; Flerin, Christopher; Davie, Kristofer; De Waegeneer, Maxime; Hulselmans, Gert; Aibar, Sara; Seurinck, Ruth; Saelens, Wouter; Cannoodt, Robrecht; Rouchon, Quentin; Verbeiren, Toni; De Maeyer, Dries; Reumers, Joke; Saeys, Yvan; Aerts, Stein

Van de Sande, Bram; Flerin, Christopher; Davie, Kristofer; De Waegeneer, Maxime; Hulselmans, Gert; Aibar, Sara; Seurinck, Ruth; Saelens, Wouter; Cannoodt, Robrecht; Rouchon, Quentin; Verbeiren, Toni; De Maeyer, Dries; Reumers, Joke; Saeys, Yvan; Aerts, Stein.

Afiliação

Van de Sande B; VIB Center for Brain & Disease Research, KU Leuven, Leuven, Belgium.
Flerin C; Department of Human Genetics, KU Leuven, Leuven, Belgium.
Davie K; VIB Center for Brain & Disease Research, KU Leuven, Leuven, Belgium.
De Waegeneer M; Department of Human Genetics, KU Leuven, Leuven, Belgium.
Hulselmans G; VIB Center for Brain & Disease Research, KU Leuven, Leuven, Belgium.
Aibar S; VIB Center for Brain & Disease Research, KU Leuven, Leuven, Belgium.
Seurinck R; Department of Human Genetics, KU Leuven, Leuven, Belgium.
Saelens W; VIB Center for Brain & Disease Research, KU Leuven, Leuven, Belgium.
Cannoodt R; Department of Human Genetics, KU Leuven, Leuven, Belgium.
Rouchon Q; VIB Center for Brain & Disease Research, KU Leuven, Leuven, Belgium.
Verbeiren T; Department of Human Genetics, KU Leuven, Leuven, Belgium.
De Maeyer D; Data Mining and Modelling for Biomedicine, VIB Center for Inflammation Research, Ghent, Belgium.
Reumers J; Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium.
Saeys Y; Data Mining and Modelling for Biomedicine, VIB Center for Inflammation Research, Ghent, Belgium.
Aerts S; Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Ghent, Belgium.

Nat Protoc ; 15(7): 2247-2276, 2020 07.

Article em En | MEDLINE | ID: mdl-32561888

Assuntos

Redes Reguladoras de Genes; Análise de Célula Única/métodos; Fluxo de Trabalho; Animais; Linhagem Celular Tumoral; Humanos; Camundongos

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Redes Reguladoras de Genes / Fluxo de Trabalho / Análise de Célula Única Tipo de estudo: Guideline / Prognostic_studies Limite: Animals / Humans Idioma: En Ano de publicação: 2020 Tipo de documento: Article

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