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Rtpca: an R package for differential thermal proximity coaggregation analysis.
Kurzawa, Nils; Mateus, André; Savitski, Mikhail M.
Afiliação
  • Kurzawa N; European Molecular Biology Laboratory, Genome Biology Unit, 69117 Heidelberg, Germany.
  • Mateus A; Candidate for Joint PhD Between EMBL and Heidelberg University, Faculty of Biosciences, 69120 Heidelberg, Germany.
  • Savitski MM; European Molecular Biology Laboratory, Genome Biology Unit, 69117 Heidelberg, Germany.
Bioinformatics ; 37(3): 431-433, 2021 04 20.
Article em En | MEDLINE | ID: mdl-32717044
ABSTRACT

SUMMARY:

Rtpca is an R package implementing methods for inferring protein-protein interactions (PPIs) based on thermal proteome profiling experiments of a single condition or in a differential setting via an approach called thermal proximity coaggregation. It offers user-friendly tools to explore datasets for their PPI predictive performance and easily integrates with available R packages. AVAILABILITY AND IMPLEMENTATION Rtpca is available from Bioconductor (https//bioconductor.org/packages/Rtpca). SUPPLEMENTARY INFORMATION Supplementary data are available at Bioinformatics online.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Software / Perfilação da Expressão Gênica Idioma: En Ano de publicação: 2021 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Software / Perfilação da Expressão Gênica Idioma: En Ano de publicação: 2021 Tipo de documento: Article