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Identification and Characterization of the Intra-Articular Microbiome in the Osteoarthritic Knee.
Tsai, Joseph C; Casteneda, Grant; Lee, Abby; Dereschuk, Kypros; Li, Wei Tse; Chakladar, Jaideep; Lombardi, Alecio F; Ongkeko, Weg M; Chang, Eric Y.
Afiliação
  • Tsai JC; Department of Surgery, Division of Otolaryngology-Head and Neck Surgery, UC San Diego School of Medicine, San Diego, CA 92093, USA.
  • Casteneda G; Research Service, VA San Diego Healthcare System, San Diego, CA 92093, USA.
  • Lee A; Department of Surgery, Division of Otolaryngology-Head and Neck Surgery, UC San Diego School of Medicine, San Diego, CA 92093, USA.
  • Dereschuk K; Research Service, VA San Diego Healthcare System, San Diego, CA 92093, USA.
  • Li WT; Department of Surgery, Division of Otolaryngology-Head and Neck Surgery, UC San Diego School of Medicine, San Diego, CA 92093, USA.
  • Chakladar J; Research Service, VA San Diego Healthcare System, San Diego, CA 92093, USA.
  • Lombardi AF; Department of Surgery, Division of Otolaryngology-Head and Neck Surgery, UC San Diego School of Medicine, San Diego, CA 92093, USA.
  • Ongkeko WM; Research Service, VA San Diego Healthcare System, San Diego, CA 92093, USA.
  • Chang EY; Department of Surgery, Division of Otolaryngology-Head and Neck Surgery, UC San Diego School of Medicine, San Diego, CA 92093, USA.
Int J Mol Sci ; 21(22)2020 Nov 16.
Article em En | MEDLINE | ID: mdl-33207573
Osteoarthritis (OA) is the most common joint disorder in the United States, and the gut microbiome has recently emerged as a potential etiologic factor in OA development. Recent studies have shown that a microbiome is present at joint synovia. Therefore, we aimed to characterize the intra-articular microbiome within osteoarthritic synovia and to illustrate its role in OA disease progression. RNA-sequencing data from OA patient synovial tissue was aligned to a library of microbial reference genomes to identify microbial reads indicative of microbial abundance. Microbial abundance data of OA and normal samples was compared to identify differentially abundant microbes. We computationally explored the correlation of differentially abundant microbes to immunological gene signatures, immune signaling pathways, and immune cell infiltration. We found that microbes correlated to OA are related to dysregulation of two main functional pathways: increased inflammation-induced extracellular matrix remodeling and decreased cell signaling pathways crucial for joint and immune function. We also confirmed that the differentially abundant and biologically relevant microbes we had identified were not contaminants. Collectively, our findings contribute to the understanding of the human microbiome, well-known OA risk factors, and the role microbes play in OA pathogenesis. In conclusion, we present previously undiscovered microbes implicated in the OA disease progression that may be useful for future treatment purposes.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Membrana Sinovial / Bactérias / Osteoartrite do Joelho / Microbiota / Articulação do Joelho Tipo de estudo: Diagnostic_studies / Prognostic_studies / Risk_factors_studies Limite: Humans Idioma: En Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Membrana Sinovial / Bactérias / Osteoartrite do Joelho / Microbiota / Articulação do Joelho Tipo de estudo: Diagnostic_studies / Prognostic_studies / Risk_factors_studies Limite: Humans Idioma: En Ano de publicação: 2020 Tipo de documento: Article