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Composite modeling of leaf shape along shoots discriminates Vitis species better than individual leaves.
Bryson, Abigail E; Wilson Brown, Maya; Mullins, Joey; Dong, Wei; Bahmani, Keivan; Bornowski, Nolan; Chiu, Christina; Engelgau, Philip; Gettings, Bethany; Gomezcano, Fabio; Gregory, Luke M; Haber, Anna C; Hoh, Donghee; Jennings, Emily E; Ji, Zhongjie; Kaur, Prabhjot; Kenchanmane Raju, Sunil K; Long, Yunfei; Lotreck, Serena G; Mathieu, Davis T; Ranaweera, Thilanka; Ritter, Eleanore J; Sadohara, Rie; Shrote, Robert Z; Smith, Kaila E; Teresi, Scott J; Venegas, Julian; Wang, Hao; Wilson, McKena L; Tarrant, Alyssa R; Frank, Margaret H; Migicovsky, Zoë; Kumar, Jyothi; VanBuren, Robert; Londo, Jason P; Chitwood, Daniel H.
Afiliação
  • Bryson AE; Genetics Program Michigan State University East Lansing Michigan 48824 USA.
  • Wilson Brown M; Department of Biochemistry and Molecular Biology Michigan State University East Lansing Michigan 48824 USA.
  • Mullins J; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Dong W; Department of Horticulture Michigan State University East Lansing Michigan 48824 USA.
  • Bahmani K; Department of Biochemistry and Molecular Biology Michigan State University East Lansing Michigan 48824 USA.
  • Bornowski N; Department of Horticulture Michigan State University East Lansing Michigan 48824 USA.
  • Chiu C; Department of Horticulture Michigan State University East Lansing Michigan 48824 USA.
  • Engelgau P; Department of Plant, Soil and Microbial Sciences Michigan State University East Lansing Michigan 48824 USA.
  • Gettings B; Department of Horticulture Michigan State University East Lansing Michigan 48824 USA.
  • Gomezcano F; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Gregory LM; Department of Biochemistry and Molecular Biology Michigan State University East Lansing Michigan 48824 USA.
  • Haber AC; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Hoh D; Department of Horticulture Michigan State University East Lansing Michigan 48824 USA.
  • Jennings EE; Cell and Molecular Biology Program Michigan State University East Lansing Michigan 48824 USA.
  • Ji Z; MSU-DOE Plant Research Laboratory Michigan State University East Lansing Michigan 48824 USA.
  • Kaur P; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Kenchanmane Raju SK; Molecular Plant Sciences Program Michigan State University East Lansing Michigan 48824 USA.
  • Long Y; Department of Plant, Soil and Microbial Sciences Michigan State University East Lansing Michigan 48824 USA.
  • Lotreck SG; Department of Horticulture Michigan State University East Lansing Michigan 48824 USA.
  • Mathieu DT; Plant Breeding, Genetics, and Biotechnology Michigan State University East Lansing Michigan 48824 USA.
  • Ranaweera T; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Ritter EJ; Department of Electrical and Computer Engineering Michigan State University East Lansing Michigan 48824 USA.
  • Sadohara R; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Shrote RZ; Genetics Program Michigan State University East Lansing Michigan 48824 USA.
  • Smith KE; Department of Biochemistry and Molecular Biology Michigan State University East Lansing Michigan 48824 USA.
  • Teresi SJ; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Venegas J; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Wang H; Department of Plant, Soil and Microbial Sciences Michigan State University East Lansing Michigan 48824 USA.
  • Wilson ML; Department of Plant, Soil and Microbial Sciences Michigan State University East Lansing Michigan 48824 USA.
  • Tarrant AR; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Frank MH; Department of Horticulture Michigan State University East Lansing Michigan 48824 USA.
  • Migicovsky Z; Department of Computational Mathematics, Science, and Engineering Michigan State University East Lansing Michigan 48824 USA.
  • Kumar J; Department of Computational Mathematics, Science, and Engineering Michigan State University East Lansing Michigan 48824 USA.
  • VanBuren R; Department of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
  • Londo JP; Department of Horticulture Michigan State University East Lansing Michigan 48824 USA.
  • Chitwood DH; School of Integrative Plant Science Plant Biology Section Cornell University Ithaca New York 14850 USA.
Appl Plant Sci ; 8(12): e11404, 2020 Dec.
Article em En | MEDLINE | ID: mdl-33344095
ABSTRACT
PREMISE Leaf morphology is dynamic, continuously deforming during leaf expansion and among leaves within a shoot. Here, we measured the leaf morphology of more than 200 grapevines (Vitis spp.) over four years and modeled changes in leaf shape along the shoot to determine whether a composite leaf shape comprising all the leaves from a single shoot can better capture the variation and predict species identity compared with individual leaves.

METHODS:

Using homologous universal landmarks found in grapevine leaves, we modeled various morphological features as polynomial functions of leaf nodes. The resulting functions were used to reconstruct modeled leaf shapes across the shoots, generating composite leaves that comprehensively capture the spectrum of leaf morphologies present.

RESULTS:

We found that composite leaves are better predictors of species identity than individual leaves from the same plant. We were able to use composite leaves to predict the species identity of previously unassigned grapevines, which were verified with genotyping.

DISCUSSION:

Observations of individual leaf shape fail to capture the true diversity between species. Composite leaf shape-an assemblage of modeled leaf snapshots across the shoot-is a better representation of the dynamic and essential shapes of leaves, in addition to serving as a better predictor of species identity than individual leaves.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2020 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2020 Tipo de documento: Article