Your browser doesn't support javascript.
loading
Identification of a large dataset of SNPs in hair-fin anchovy (Setipinna tenuifilis) based on RAD-seq.
Peng, Y; Li, J S; Zhang, K; Liu, Y F; Li, X P; Zhang, H; Gong, L; Liu, L Q; Lü, Z M; Liu, B J.
Afiliação
  • Peng Y; National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Li JS; National Engineering Research Center for Facilitated Marine Aquaculture, Marine Science and Technology College, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Zhang K; National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Liu YF; National Engineering Research Center for Facilitated Marine Aquaculture, Marine Science and Technology College, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Li XP; National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Zhang H; National Engineering Research Center for Facilitated Marine Aquaculture, Marine Science and Technology College, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Gong L; National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Liu LQ; National Engineering Research Center for Facilitated Marine Aquaculture, Marine Science and Technology College, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Lü ZM; National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
  • Liu BJ; National Engineering Research Center for Facilitated Marine Aquaculture, Marine Science and Technology College, Zhejiang Ocean University, No.1 Haidanan road, Zhoushan, 316022, China.
Anim Genet ; 52(3): 371-374, 2021 Jun.
Article em En | MEDLINE | ID: mdl-33840129
ABSTRACT
Hair-fin anchovy (Setipinna tenuifilis) is an economically important fish distributed in the West Indian Ocean and the Northwest Pacific Ocean. In this study, 154 individuals in eight populations of S. tenuifilis were sequenced and 850 million raw reads were obtained using restriction site-associated DNA sequencing (RAD-seq). First, we identified 14 012 044 hypothetical SNP markers. A dataset of 199 903 high-quality SNPs was collected after further screening. These SNPs have a strong ability to test the genetic diversity between the eight populations. The differentiation and genetic law between samples were explored based on SNPs in populations of S. tenuifilis. The results of this study will provide data for protecting the genetic resources of the species.
Assuntos
Palavras-chave
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Polimorfismo de Nucleotídeo Único / Peixes / Genética Populacional Tipo de estudo: Diagnostic_studies Limite: Animals País/Região como assunto: Asia Idioma: En Ano de publicação: 2021 Tipo de documento: Article
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Polimorfismo de Nucleotídeo Único / Peixes / Genética Populacional Tipo de estudo: Diagnostic_studies Limite: Animals País/Região como assunto: Asia Idioma: En Ano de publicação: 2021 Tipo de documento: Article