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Chachezhania sediminis sp. nov., isolated from marine sediment.
Baek, Jihye; Kim, Jong-Hwa; Yoon, Jung-Hoon; Lee, Jung-Sook; Sukhoom, Ampaitip; Kim, Wonyong.
Afiliação
  • Baek J; Department of Microbiology, Chung-Ang University College of Medicine, Seoul 06974, Republic of Korea.
  • Kim JH; Department of Microbiology, Chung-Ang University College of Medicine, Seoul 06974, Republic of Korea.
  • Yoon JH; Department of Food Science and Biotechnology, Sungkyunkwan University, Suwon, Republic of Korea.
  • Lee JS; Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, Republic of Korea.
  • Sukhoom A; Department of Microbiology, Faculty of Science, Prince of Songkla University, Songkhla 90112, Thailand.
  • Kim W; Department of Microbiology, Chung-Ang University College of Medicine, Seoul 06974, Republic of Korea.
Article em En | MEDLINE | ID: mdl-34292146
A Gram-stain-negative, aerobic, non-motile, rod-shaped bacterial strain (CAU 1508T) was isolated from marine sediment collected in the Republic of Korea. Growth was observed at 10-45 °C (optimum, 30 °C), pH 4.0-11.0 (optimum, pH 6.0-8.0) and with 0-8.0 % (w/v) NaCl (optimum, 2-4 %). The isolate formed a monophyletic clade in the phylogenetic analyses using 16S rRNA gene and whole-genome sequences, exhibiting the highest similarity to Chachezhania antarctica SM1703T (96.5 %), and representing a distinct branch within the genus Chachezhania (family Rhodobacteraceae). Its whole genome sequence was 5.59 Mb long, with a G+C content of 65.7 mol% and 2183 predicted genes belonging to six functional categories. The average nucleotide identity and digital DNA-DNA hybridization values between CAU 1508T and C. antarctica SM1703T were 79.1 and 22.2 %, respectively. The predominant cellular fatty acids were C19 : 0 cyclo ω8c and summed feature 8 (C18 : 1 ω7c/C18 : 1 ω6c). The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, two unidentified phospholipids and one unidentified aminophospholipid. The sole isoprenoid quinone was ubiquinone 10. Phenotypic phylogenetic properties supported the classification of CAU 1508T as representing a novel species of the genus Chachezhania, with the proposed name Chachezhania sediminis sp. nov. The type strain is CAU 1508T (=KCTC 62999T=NBRC 113697T).
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Filogenia / Água do Mar / Sedimentos Geológicos / Rhodobacteraceae País/Região como assunto: Asia Idioma: En Ano de publicação: 2021 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Filogenia / Água do Mar / Sedimentos Geológicos / Rhodobacteraceae País/Região como assunto: Asia Idioma: En Ano de publicação: 2021 Tipo de documento: Article