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Assessing therapy response in patient-derived xenografts.
Ortmann, Janosch; Rampásek, Ladislav; Tai, Elijah; Mer, Arvind Singh; Shi, Ruoshi; Stewart, Erin L; Mascaux, Celine; Fares, Aline; Pham, Nhu-An; Beri, Gangesh; Eeles, Christopher; Tkachuk, Denis; Ho, Chantal; Sakashita, Shingo; Weiss, Jessica; Jiang, Xiaoqian; Liu, Geoffrey; Cescon, David W; O'Brien, Catherine A; Guo, Sheng; Tsao, Ming-Sound; Haibe-Kains, Benjamin; Goldenberg, Anna.
Afiliação
  • Ortmann J; Département AOTI, Université du Québec à Montréal, Montréal, QC H2X3X2, Canada.
  • Rampásek L; Group for Research in Decision Analysis (GERAD), Montreal, QC H3T1J4, Canada.
  • Tai E; Department of Computer Science, University of Toronto, Toronto, ON M5S2E4, Canada.
  • Mer AS; Vector Institute for Artificial Intelligence, Toronto, ON M5G1M1, Canada.
  • Shi R; Hospital for Sick Children, Toronto, ON M5G1X8, Canada.
  • Stewart EL; Department of Computer Science, University of Toronto, Toronto, ON M5S2E4, Canada.
  • Mascaux C; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Fares A; Department of Medical Biophysics, University of Toronto, Toronto, ON M5G1L7, Canada.
  • Pham NA; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Beri G; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Eeles C; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Tkachuk D; Pulmonology Department, Hôpitaux Universitaires de Strasbourg, 67200 Strasbourg, France.
  • Ho C; Laboratory of Molecular Mechanisms of the Stress Response and Pathologies, INSERM U1113, 3 Avenue Molière, 67200 Strasbourg, France.
  • Sakashita S; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Weiss J; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Jiang X; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Liu G; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Cescon DW; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • O'Brien CA; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Guo S; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Tsao MS; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
  • Haibe-Kains B; Crown Bioscience Taicang Inc., No.6 Beijing West Road, Taicang, Jiangsu 215400, P. R. China.
  • Goldenberg A; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G1L7, Canada.
Sci Transl Med ; 13(620): eabf4969, 2021 11 17.
Article em En | MEDLINE | ID: mdl-34788078
ABSTRACT
Quantifying response to drug treatment in mouse models of human cancer is important for treatment development and assignment, yet remains a challenging task. To be able to translate the results of the experiments more readily, a preferred measure to quantify this response should take into account more of the available experimental data, including both tumor size over time and the variation among replicates. We propose a theoretically grounded measure, KuLGaP, to compute the difference between the treatment and control arms. We test and compare KuLGaP to four widely used response measures using 329 patient-derived xenograft (PDX) models. Our results show that KuLGaP is more selective than currently existing measures, reduces the risk of false-positive calls, and improves translation of the laboratory results to clinical practice. We also show that outcomes of human treatment better align with the results of the KuLGaP measure than other response measures. KuLGaP has the potential to become a measure of choice for quantifying drug treatment in mouse models as it can be easily used via the kulgap.ca website.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Xenoenxertos Limite: Animals / Humans Idioma: En Ano de publicação: 2021 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Xenoenxertos Limite: Animals / Humans Idioma: En Ano de publicação: 2021 Tipo de documento: Article