AGAMEMNON: an Accurate metaGenomics And MEtatranscriptoMics quaNtificatiON analysis suite.

Skoufos, Giorgos; Almodaresi, Fatemeh; Zakeri, Mohsen; Paulson, Joseph N; Patro, Rob; Hatzigeorgiou, Artemis G; Vlachos, Ioannis S

Skoufos, Giorgos; Almodaresi, Fatemeh; Zakeri, Mohsen; Paulson, Joseph N; Patro, Rob; Hatzigeorgiou, Artemis G; Vlachos, Ioannis S.

Afiliação

Skoufos G; Department of Electrical & Computer Engineering, University of Thessaly, 38221, Volos, Greece. gskoufos@uth.gr.
Almodaresi F; Hellenic Pasteur Institute, 11521, Athens, Greece. gskoufos@uth.gr.
Zakeri M; DIANA-Lab, Department of Computer Science and Biomedical Informatics, Univ. of Thessaly, 351 31, Lamia, Greece. gskoufos@uth.gr.
Paulson JN; Department of Computer Science, University of Maryland, College Park, MD, USA.
Patro R; Department of Computer Science, University of Maryland, College Park, MD, USA.
Hatzigeorgiou AG; Department of Data Sciences, Genentech Inc., South San Francisco, CA, USA.
Vlachos IS; Department of Computer Science, University of Maryland, College Park, MD, USA.

Genome Biol ; 23(1): 39, 2022 01 31.

Article em En | MEDLINE | ID: mdl-35101114

Assuntos

Metagenoma; Metagenômica; Análise de Sequência de DNA; Análise de Sequência de RNA

Palavras-chave

Computational metagenomics; Identification of contaminants; Microbiome; Quantification of microbial abundances; Time- and space-efficient indexing/alignment

Texto completo

Imprimir

XML

PubMed Links

Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Metagenoma / Metagenômica Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo

Imprimir

XML

PubMed Links

Buscar no Google