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Learning residual motion correction for fast and robust 3D multiparametric MRI.
Pirkl, Carolin M; Cencini, Matteo; Kurzawski, Jan W; Waldmannstetter, Diana; Li, Hongwei; Sekuboyina, Anjany; Endt, Sebastian; Peretti, Luca; Donatelli, Graziella; Pasquariello, Rosa; Costagli, Mauro; Buonincontri, Guido; Tosetti, Michela; Menzel, Marion I; Menze, Bjoern H.
Afiliação
  • Pirkl CM; Department of Computer Science, Technical University of Munich, Garching, Germany; GE Healthcare, Munich, Germany. Electronic address: carolin.pirkl@tum.de.
  • Cencini M; IRCCS Fondazione Stella Maris, Pisa, Italy; Fondazione Imago7, Pisa, Italy.
  • Kurzawski JW; Pisa Division, National Institute for Nuclear Physics (INFN), Pisa, Italy.
  • Waldmannstetter D; Department of Computer Science, Technical University of Munich, Garching, Germany; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland.
  • Li H; Department of Computer Science, Technical University of Munich, Garching, Germany; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland.
  • Sekuboyina A; Department of Computer Science, Technical University of Munich, Garching, Germany; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland; Department of Neuroradiology, Klinikum rechts der Isar, Munich, Germany.
  • Endt S; Department of Computer Science, Technical University of Munich, Garching, Germany; GE Healthcare, Munich, Germany.
  • Peretti L; Department of Computer Science, University of Pisa, Pisa, Italy; IRCCS Fondazione Stella Maris, Pisa, Italy; Fondazione Imago7, Pisa, Italy.
  • Donatelli G; Azienda Ospedaliero-Universitaria Pisana, Pisa Italy; Fondazione Imago7, Pisa, Italy.
  • Pasquariello R; IRCCS Fondazione Stella Maris, Pisa, Italy.
  • Costagli M; IRCCS Fondazione Stella Maris, Pisa, Italy; Department of Neuroscience, Rehabilitation, Ophtalmology, Genetics, Maternal and Child Sciences (DINOGMI), University of Genova, Genova, Italy.
  • Buonincontri G; IRCCS Fondazione Stella Maris, Pisa, Italy; Fondazione Imago7, Pisa, Italy.
  • Tosetti M; IRCCS Fondazione Stella Maris, Pisa, Italy; Fondazione Imago7, Pisa, Italy.
  • Menzel MI; AImotion Bavaria, Faculty of Electrical Engineering and Information Technology, Technische Hochschule Ingolstadt, Ingolstadt, Germany; GE Healthcare, Munich, Germany; Department of Physics, Technical University of Munich, Garching, Germany.
  • Menze BH; Department of Quantitative Biomedicine, University of Zurich, Zurich, Switzerland; Department of Computer Science, Technical University of Munich, Garching, Germany.
Med Image Anal ; 77: 102387, 2022 04.
Article em En | MEDLINE | ID: mdl-35180675
ABSTRACT
Voluntary and involuntary patient motion is a major problem for data quality in clinical routine of Magnetic Resonance Imaging (MRI). It has been thoroughly investigated and, yet it still remains unresolved. In quantitative MRI, motion artifacts impair the entire temporal evolution of the magnetization and cause errors in parameter estimation. Here, we present a novel strategy based on residual learning for retrospective motion correction in fast 3D whole-brain multiparametric MRI. We propose a 3D multiscale convolutional neural network (CNN) that learns the non-linear relationship between the motion-affected quantitative parameter maps and the residual error to their motion-free reference. For supervised model training, despite limited data availability, we propose a physics-informed simulation to generate self-contained paired datasets from a priori motion-free data. We evaluate motion-correction performance of the proposed method for the example of 3D Quantitative Transient-state Imaging at 1.5T and 3T. We show the robustness of the motion correction for various motion regimes and demonstrate the generalization capabilities of the residual CNN in terms of real-motion in vivo data of healthy volunteers and clinical patient cases, including pediatric and adult patients with large brain lesions. Our study demonstrates that the proposed motion correction outperforms current state of the art, reliably providing a high, clinically relevant image quality for mild to pronounced patient movements. This has important implications in clinical setups where large amounts of motion affected data must be discarded as they are rendered diagnostically unusable.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Imageamento por Ressonância Magnética Multiparamétrica Tipo de estudo: Observational_studies Limite: Adult / Child / Humans Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Imageamento por Ressonância Magnética Multiparamétrica Tipo de estudo: Observational_studies Limite: Adult / Child / Humans Idioma: En Ano de publicação: 2022 Tipo de documento: Article