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Genome report: chromosome-level draft assemblies of the snow leopard, African leopard, and tiger (Panthera uncia, Panthera pardus pardus, and Panthera tigris).
Armstrong, Ellie E; Campana, Michael G; Solari, Katherine A; Morgan, Simon R; Ryder, Oliver A; Naude, Vincent N; Samelius, Gustaf; Sharma, Koustubh; Hadly, Elizabeth A; Petrov, Dmitri A.
Afiliação
  • Armstrong EE; Department of Biology, Stanford University, Stanford, CA 94305, USA.
  • Campana MG; Department of Biology, Washington State University, Pullman, WA 99164, USA.
  • Solari KA; Center for Conservation Genomics, Smithsonian's National Zoological Park and Conservation Biology Institute, Washington, DC 20008, USA.
  • Morgan SR; Department of Biology, Stanford University, Stanford, CA 94305, USA.
  • Ryder OA; Department of Biology, Stanford University, Stanford, CA 94305, USA.
  • Naude VN; Wildlife ACT Fund Trust, Cape Town 8001, South Africa.
  • Samelius G; San Diego Zoo Wildlife Alliance, Beckman Center for Conservation Research, San Diego, CA 92027, USA.
  • Sharma K; Department of Conservation Ecology and Entomology, University of Stellenbosch, Stellenbosch, 7602, South Africa.
  • Hadly EA; School of Animal, Plant and Environmental Sciences, University of the Witwatersrand, Johannesburg 2000, South Africa.
  • Petrov DA; Snow Leopard Trust, Seattle, WA 98103, USA.
G3 (Bethesda) ; 12(12)2022 12 01.
Article em En | MEDLINE | ID: mdl-36250809
ABSTRACT
The big cats (genus Panthera) represent some of the most popular and charismatic species on the planet. Although some reference genomes are available for this clade, few are at the chromosome level, inhibiting high-resolution genomic studies. We assembled genomes from 3 members of the genus, the tiger (Panthera tigris), the snow leopard (Panthera uncia), and the African leopard (Panthera pardus pardus), at chromosome or near-chromosome level. We used a combination of short- and long-read technologies, as well as proximity ligation data from Hi-C technology, to achieve high continuity and contiguity for each individual. We hope that these genomes will aid in further evolutionary and conservation research of this iconic group of mammals.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Panthera / Tigres Limite: Animals Idioma: En Ano de publicação: 2022 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Panthera / Tigres Limite: Animals Idioma: En Ano de publicação: 2022 Tipo de documento: Article