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Integrated omic techniques and their genomic features for invasive weeds.
Huang, Ping; Hameed, Rashida; Abbas, Manzer; Balooch, Sidra; Alharthi, Badr; Du, Yizhou; Abbas, Adeel; Younas, Afifa; Du, Daolin.
Afiliação
  • Huang P; Institute of Environment and Ecology, School of Environment and Safety Engineering, Jiangsu University, Zhenjiang, 212013, People's Republic of China.
  • Hameed R; Institute of Environment and Ecology, School of Environment and Safety Engineering, Jiangsu University, Zhenjiang, 212013, People's Republic of China.
  • Abbas M; School of Agriculture, Forestry and Food Engineering, Yibin University, Yibin, 644000, Sichuan Province, People's Republic of China.
  • Balooch S; Institute of Botany, Bahauddin Zakariya University, Multan, Punjab, Pakistan.
  • Alharthi B; Department of Biology, University College of Al Khurmah, Taif University, PO. Box 11099, Taif, 21944, Saudi Arabia.
  • Du Y; Faculty of Engineering, School of Computer Science, University of Sydney, Sydney, New South Wales, Australia.
  • Abbas A; Institute of Environment and Ecology, School of Environment and Safety Engineering, Jiangsu University, Zhenjiang, 212013, People's Republic of China. 1000005873@ujs.edu.cn.
  • Younas A; Department of Botany, Lahore College for Women University, Lahore, Pakistan.
  • Du D; Institute of Environment and Ecology, School of Environment and Safety Engineering, Jiangsu University, Zhenjiang, 212013, People's Republic of China. daolindu@163.com.
Funct Integr Genomics ; 23(1): 44, 2023 Jan 21.
Article em En | MEDLINE | ID: mdl-36680630
ABSTRACT
Many emerging invasive weeds display rapid adaptation against different stressful environments compared to their natives. Rapid adaptation and dispersal habits helped invasive populations have strong diversity within the population compared to their natives. Advances in molecular marker techniques may lead to an in-depth understanding of the genetic diversity of invasive weeds. The use of molecular techniques is rapidly growing, and their implications in invasive weed studies are considered powerful tools for genome purposes. Here, we review different approach used multi-omics by invasive weed studies to understand the functional structural and genomic changes in these species under different environmental fluctuations, particularly, to check the accessibility of advance-sequencing techniques used by researchers in genome sequence projects. In this review-based study, we also examine the importance and efficiency of different molecular techniques in identifying and characterizing different genes, associated markers, proteins, metabolites, and key metabolic pathways in invasive and native weeds. Use of these techniques could help weed scientists to further reduce the knowledge gaps in understanding invasive weeds traits. Although these techniques can provide robust insights about the molecular functioning, employing a single omics platform can rarely elucidate the gene-level regulation and the associated real-time expression of weedy traits due to the complex and overlapping nature of biological interactions. We conclude that different multi-omic techniques will provide long-term benefits in launching new genome projects to enhance the understanding of invasive weeds' invasion process.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genômica / Plantas Daninhas Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Genômica / Plantas Daninhas Idioma: En Ano de publicação: 2023 Tipo de documento: Article