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Enhancing collaborative neuroimaging research: introducing COINSTAC Vaults for federated analysis and reproducibility.
Martin, Dylan; Basodi, Sunitha; Panta, Sandeep; Rootes-Murdy, Kelly; Prae, Paul; Sarwate, Anand D; Kelly, Ross; Romero, Javier; Baker, Bradley T; Gazula, Harshvardhan; Bockholt, Jeremy; Turner, Jessica A; Esper, Nathalia B; Franco, Alexandre R; Plis, Sergey; Calhoun, Vince D.
Afiliação
  • Martin D; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Basodi S; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Panta S; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Rootes-Murdy K; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Prae P; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Sarwate AD; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Kelly R; Department of Electrical and Computer Engineering, Rutgers University-New Brunswick, Piscataway, NJ, United States.
  • Romero J; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Baker BT; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Gazula H; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Bockholt J; Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital and Harvard Medical School, Boston, MA, United States.
  • Turner JA; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Esper NB; Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State, Georgia Tech, Emory, Atlanta, GA, United States.
  • Franco AR; Center for the Developing Brain, Child Mind Institute, New York, NY, United States.
  • Plis S; Center for the Developing Brain, Child Mind Institute, New York, NY, United States.
  • Calhoun VD; Center for Brain Imaging and Neuromodulation, Nathan Kline Institute for Psychiatric Research, Orangeburg, NY, United States.
Front Neuroinform ; 17: 1207721, 2023.
Article em En | MEDLINE | ID: mdl-37404336
ABSTRACT
Collaborative neuroimaging research is often hindered by technological, policy, administrative, and methodological barriers, despite the abundance of available data. COINSTAC (The Collaborative Informatics and Neuroimaging Suite Toolkit for Anonymous Computation) is a platform that successfully tackles these challenges through federated analysis, allowing researchers to analyze datasets without publicly sharing their data. This paper presents a significant enhancement to the COINSTAC platform COINSTAC Vaults (CVs). CVs are designed to further reduce barriers by hosting standardized, persistent, and highly-available datasets, while seamlessly integrating with COINSTAC's federated analysis capabilities. CVs offer a user-friendly interface for self-service analysis, streamlining collaboration, and eliminating the need for manual coordination with data owners. Importantly, CVs can also be used in conjunction with open data as well, by simply creating a CV hosting the open data one would like to include in the analysis, thus filling an important gap in the data sharing ecosystem. We demonstrate the impact of CVs through several functional and structural neuroimaging studies utilizing federated analysis showcasing their potential to improve the reproducibility of research and increase sample sizes in neuroimaging studies.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2023 Tipo de documento: Article