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Validation of Dried Blood Spots for Capturing Hepatitis C Virus Diversity for Genomic Surveillance.
Tully, Damien C; Power, Karen A; Sarette, Jacklyn; Stopka, Thomas J; Friedmann, Peter D; Korthuis, P Todd; Cooper, Hannah; Young, April M; Seal, David W; Westergaard, Ryan P; Allen, Todd M.
Afiliação
  • Tully DC; Department of Infectious Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, UK.
  • Power KA; Center for Mathematical Modelling of Infectious Disease, London School of Hygiene and Tropical Medicine, London, UK.
  • Sarette J; Ragon Institute of MGH, MIT and Harvard, Cambridge, Massachusetts, USA.
  • Stopka TJ; Ragon Institute of MGH, MIT and Harvard, Cambridge, Massachusetts, USA.
  • Friedmann PD; Tufts University School of Medicine Public Health and Community Medicine, 136 Harrison Avenue, Boston, MA, 02111, USA.
  • Korthuis PT; Baystate Medical Center-University of Massachusetts, Office of Research, UMass Chan Medical School - Baystate, 3601 Main Street, 3rd Floor, Springfield, MA, 01199, USA.
  • Cooper H; Oregon Health & Science University, 3270 Southwest Pavilion Loop OHSU Physicians Pavilion, Suite 350, Portland, OR, 97239, USA.
  • Young AM; Rollins School of Public Health, Emory University, Grace Crum Rollins Building 1518 Clifton Road, Atlanta, GA, 30322, USA.
  • Seal DW; University of Kentucky, 760 Press Avenue Suite 280, Lexington, KY, 40536, USA.
  • Westergaard RP; Tulane University, 1440 Canal Street, Suite 2210, New Orleans, LA, 70112, USA.
  • Allen TM; University of Wisconsin-Madison, 1685 Highland Avenue, 5th Floor, Madison, WI, 53705-2281, USA.
medRxiv ; 2023 Jul 07.
Article em En | MEDLINE | ID: mdl-37461565
ABSTRACT
Dried blood spots (DBS) have emerged as a promising alternative to traditional venous blood for HCV testing. However, their capacity to accurately reflect the genetic diversity of HCV remains poorly understood. We employed deep sequencing and advanced phylogenetic analyses on paired plasma and DBS samples to evaluate the suitability of DBS for genomic surveillance. Results demonstrated that DBS captured equivalent viral diversity compared to plasma with no phylogenetic discordance observed. The ability of DBS to accurately reflect the profile of viral genetic diversity suggests it may be a promising avenue for future surveillance efforts to curb HCV outbreaks.

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Screening_studies Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Screening_studies Idioma: En Ano de publicação: 2023 Tipo de documento: Article