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COVID-19 and cholesterol biosynthesis: Towards innovative decision support systems.
Kocar, Eva; Katz, Sonja; Pusnik, Ziga; Bogovic, Petra; Turel, Gabriele; Skubic, Cene; Rezen, Tadeja; Strle, Franc; Martins Dos Santos, Vitor A P; Mraz, Miha; Moskon, Miha; Rozman, Damjana.
Afiliação
  • Kocar E; Centre for Functional Genomics and Bio-Chips, Institute of Biochemistry and Molecular Genetics, Faculty of Medicine, University of Ljubljana, Zaloska cesta 4, SI-1000 Ljubljana, Slovenia.
  • Katz S; LifeGlimmer GmbH, Markelstraße 38, 12163 Berlin, Germany.
  • Pusnik Z; Biomanufacturing and Digital Twins Group, Bioprocess Engineering Laboratory, Wageningen University and Research, Droevendaalsesteeg 1, 6708PB Wageningen, the Netherlands.
  • Bogovic P; Faculty of Computer and Information Science, University of Ljubljana, Vecna pot 113, SI-1000 Ljubljana, Slovenia.
  • Turel G; Department of Infectious Diseases, University Medical Centre Ljubljana, Japljeva ulica 2, SI-1000 Ljubljana, Slovenia.
  • Skubic C; Department of Infectious Diseases, University Medical Centre Ljubljana, Japljeva ulica 2, SI-1000 Ljubljana, Slovenia.
  • Rezen T; Centre for Functional Genomics and Bio-Chips, Institute of Biochemistry and Molecular Genetics, Faculty of Medicine, University of Ljubljana, Zaloska cesta 4, SI-1000 Ljubljana, Slovenia.
  • Strle F; Centre for Functional Genomics and Bio-Chips, Institute of Biochemistry and Molecular Genetics, Faculty of Medicine, University of Ljubljana, Zaloska cesta 4, SI-1000 Ljubljana, Slovenia.
  • Martins Dos Santos VAP; Department of Infectious Diseases, University Medical Centre Ljubljana, Japljeva ulica 2, SI-1000 Ljubljana, Slovenia.
  • Mraz M; LifeGlimmer GmbH, Markelstraße 38, 12163 Berlin, Germany.
  • Moskon M; Biomanufacturing and Digital Twins Group, Bioprocess Engineering Laboratory, Wageningen University and Research, Droevendaalsesteeg 1, 6708PB Wageningen, the Netherlands.
  • Rozman D; Faculty of Computer and Information Science, University of Ljubljana, Vecna pot 113, SI-1000 Ljubljana, Slovenia.
iScience ; 26(10): 107799, 2023 Oct 20.
Article em En | MEDLINE | ID: mdl-37720097
With COVID-19 becoming endemic, there is a continuing need to find biomarkers characterizing the disease and aiding in patient stratification. We studied the relation between COVID-19 and cholesterol biosynthesis by comparing 10 intermediates of cholesterol biosynthesis during the hospitalization of 164 patients (admission, disease deterioration, discharge) admitted to the University Medical Center of Ljubljana. The concentrations of zymosterol, 24-dehydrolathosterol, desmosterol, and zymostenol were significantly altered in COVID-19 patients. We further developed a predictive model for disease severity based on clinical parameters alone and their combination with a subset of sterols. Our machine learning models applying 8 clinical parameters predicted disease severity with excellent accuracy (AUC = 0.96), showing substantial improvement over current clinical risk scores. After including sterols, model performance remained better than COVID-GRAM. This is the first study to examine cholesterol biosynthesis during COVID-19 and shows that a subset of cholesterol-related sterols is associated with the severity of COVID-19.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2023 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Tipo de estudo: Prognostic_studies Idioma: En Ano de publicação: 2023 Tipo de documento: Article