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Protocol for visualizing complex volatile metabolomics data in clinical setups using EDaViS software.
Ruehrmund, Leo; Fuchs, Patricia; Bartels, Julia; Remy, Rasmus; Klemenz, Ann-Christin; Kemnitz, Nele; Trefz, Phillip; Sukul, Pritam; Miekisch, Wolfram; Schubert, Jochen K.
Afiliação
  • Ruehrmund L; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
  • Fuchs P; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany. Electronic address: patricia.fuchs@uni-rostock.de.
  • Bartels J; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
  • Remy R; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
  • Klemenz AC; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
  • Kemnitz N; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
  • Trefz P; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
  • Sukul P; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
  • Miekisch W; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
  • Schubert JK; Rostock Medical Breath Research Analytics and Technologies (RoMBAT), Dept. of Anaesthesiology, Intensive Care Medicine and Pain Therapy, Rostock University Medical Centre, 18057 Rostock, Germany.
STAR Protoc ; 5(1): 102808, 2024 Mar 15.
Article em En | MEDLINE | ID: mdl-38170664
ABSTRACT
Here, we present a protocol for using Early Data Visualization Script, a user-friendly software tool to visualize complex volatile metabolomics data in clinical setups. We describe steps for tabulating data and adjusting visual output to visualize complex time-resolved volatile omics data using simple charts and graphs. We then demonstrate possible modifications by detailing procedures for the adaptation of four basic functions. For complete details on the use and execution of this protocol, please refer to Sukul et al. (2022)1 and Remy et al. (2022).2.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Metabolômica / Visualização de Dados Tipo de estudo: Guideline Idioma: En Ano de publicação: 2024 Tipo de documento: Article
Texto completo
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Metabolômica / Visualização de Dados Tipo de estudo: Guideline Idioma: En Ano de publicação: 2024 Tipo de documento: Article