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Human telomere length is chromosome specific and conserved across individuals.
Karimian, Kayarash; Groot, Aljona; Huso, Vienna; Kahidi, Ramin; Tan, Kar-Tong; Sholes, Samantha; Keener, Rebecca; McDyer, John F; Alder, Jonathan K; Li, Heng; Rechtsteiner, Andreas; Greider, Carol W.
Afiliação
  • Karimian K; Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
  • Groot A; Biochemistry, Cellular and Molecular Biology Graduate Program, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
  • Huso V; Department of Molecular Cell and Developmental Biology, University of California, Santa Cruz.
  • Kahidi R; Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
  • Tan KT; Biochemistry, Cellular and Molecular Biology Graduate Program, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
  • Sholes S; University of Calgary, Calgary, AB, Canada.
  • Keener R; Harvard Medical School, Department of Genetics, Boston, MA.
  • McDyer JF; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA.
  • Alder JK; Broad Institute, Cancer Program, Cambridge, MA.
  • Li H; Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
  • Rechtsteiner A; Biochemistry, Cellular and Molecular Biology Graduate Program, Johns Hopkins University School of Medicine, Baltimore, MD, 21205, USA.
  • Greider CW; Present address Merck & Co., 770 Sumneytown Pike, West Point, PA 19486.
bioRxiv ; 2024 Jan 13.
Article em En | MEDLINE | ID: mdl-38187739
ABSTRACT
Short telomeres cause age-related disease and long telomeres predispose to cancer; however, the mechanisms regulating telomere length are unclear. To probe these mechanisms, we developed a nanopore sequencing method, Telomere Profiling, that is easy to implement, precise, and cost effective with broad applications in research and the clinic. We sequenced telomeres from individuals with short telomere syndromes and found similar telomere lengths to the clinical FlowFISH assay. We mapped telomere reads to specific chromosome end and identified both chromosome end-specific and haplotype-specific telomere length distributions. In the T2T HG002 genome, where the average telomere length is 5kb, we found a remarkable 6kb difference in lengths between some telomeres. Further, we found that specific chromosome ends were consistently shorter or longer than the average length across 147 individuals. The presence of conserved chromosome end-specific telomere lengths suggests there are new paradigms in telomere biology that are yet to be explored. Understanding the mechanisms regulating length will allow deeper insights into telomere biology that can lead to new approaches to disease.

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article