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Cavity approach for the approximation of spectral density of graphs with heterogeneous structures.
Guzman, Grover E C; Stadler, Peter F; Fujita, Andre.
Afiliação
  • Guzman GEC; Department of Computer Science, Institute of Mathematics and Statistics, University of São Paulo, Rua do Matão, 1010, São Paulo - SP 05508-090, Brazil.
  • Stadler PF; Bioinformatics Group, Department of Computer Science, Interdisciplinary Center for Bioinformatics, School of Excellence in Embedded Composite AI Dresden/Leipzig (SECAI), Leipzig University, Härtelstraße 16-18, D-04107 Leipzig, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstraße 4, 04103 Leipzig, Germany; Competence Center for Scalable Data Services and Solutions Dresden-Leipzig, Humboldtstraße 25, 04105 Leipzig, Germany; Leipzig University, Härtels
  • Fujita A; Department of Computer Science, Institute of Mathematics and Statistics, University of São Paulo, Rua do Matão, 1010, São Paulo - SP 05508-090, Brazil and Division of Network AI Statistics, Medical Institute of Bioregulation, Kyushu University, Fukuoka 812-8582, Japan.
Phys Rev E ; 109(3-1): 034303, 2024 Mar.
Article em En | MEDLINE | ID: mdl-38632720
ABSTRACT
Graphs have become widely used to represent and study social, biological, and technological systems. Statistical methods to analyze empirical graphs were proposed based on the graph's spectral density. However, their running time is cubic in the number of vertices, precluding direct application to large instances. Thus, efficient algorithms to calculate the spectral density become necessary. For sparse graphs, the cavity method can efficiently approximate the spectral density of locally treelike undirected and directed graphs. However, it does not apply to most empirical graphs because they have heterogeneous structures. Thus, we propose methods for undirected and directed graphs with heterogeneous structures using a new vertex's neighborhood definition and the cavity approach. Our methods' time and space complexities are O(|E|h_{max}^{3}t) and O(|E|h_{max}^{2}t), respectively, where |E| is the number of edges, h_{max} is the size of the largest local neighborhood of a vertex, and t is the number of iterations required for convergence. We demonstrate the practical efficacy by estimating the spectral density of simulated and real-world undirected and directed graphs.

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Ano de publicação: 2024 Tipo de documento: Article