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Mobility of sodium ions in agarose gels probed through combined single- and triple-quantum NMR.
Nimerovsky, Evgeny; Sieme, Daniel; Rezaei-Ghaleh, Nasrollah.
Afiliação
  • Nimerovsky E; Department of NMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Am Faßberg 11 D-37077 Göttingen, Germany.
  • Sieme D; Department of NMR-based Structural Biology, Max Planck Institute for Multidisciplinary Sciences, Am Faßberg 11 D-37077 Göttingen, Germany.
  • Rezaei-Ghaleh N; Heinrich Heine University Düsseldorf, Faculty of Mathematics and Natural Sciences, Institute of Physical Biology, Universitätsstraße 1 D-40225 Düsseldorf, Germany; Institute of Biological Information Processing, IBI-7: Structural Biochemistry, Forschungszentrum Jülich D-52428 Jülich, Germany. Electronic address: Nasrollah.Rezaie.Ghaleh@hhu.de.
Methods ; 228: 55-64, 2024 Aug.
Article em En | MEDLINE | ID: mdl-38782295
ABSTRACT
Metal ions, including biologically prevalent sodium ions, can modulate electrostatic interactions frequently involved in the stability of condensed compartments in cells. Quantitative characterization of heterogeneous ion dynamics inside biomolecular condensates demands new experimental approaches. Here we develop a 23Na NMR relaxation-based integrative approach to probe dynamics of sodium ions inside agarose gels as a model system. We exploit the electric quadrupole moment of spin-3/2 23Na nuclei and, through combination of single-quantum and triple-quantum-filtered 23Na NMR relaxation methods, disentangle the relaxation contribution of different populations of sodium ions inside gels. Three populations of sodium ions are identified a population with bi-exponential relaxation representing ions within the slow motion regime and two populations with mono-exponential relaxation but at different rates. Our study demonstrates the dynamical heterogeneity of sodium ions inside agarose gels and presents a new experimental approach for monitoring dynamics of sodium and other spin-3/2 ions (e.g. chloride) in condensed environments.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Sefarose / Sódio / Géis Idioma: En Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Sefarose / Sódio / Géis Idioma: En Ano de publicação: 2024 Tipo de documento: Article