Anticuerpos irregulares en donantes de sangre / Anticuerpos irregulares en donantes de sangre Irregular antibodies in blood donor

Introducción: El sistema inmunológico puede reconocer una gran cantidad de antígenos cuando está expuesto a ellos. Los linfocitos B producen gran variedad de anticuerpos, con el fin de generar la especificidad de los receptores para el reconocimiento de dichos antígenos. La presencia de anticuerpos irregulares, es una de las causas de reacciones adversas transfusionales por incompatibilidad entre donante y receptor. Objetivo: Describir la genética, estructura y función de los anticuerpos irregulares en los donantes de sangre. Métodos: Se llevó a cabo una revisión de la literatura, en idioma inglés y español, a través de bases de datos como Pubmed, ScienceDirect, NCBI, Redalyc y SciElo de artículos publicados en los últimos 10 años. Análisis y síntesis de la información: El sistema inmunológico genera una gran diversidad de anticuerpos mediante el proceso de recombinación somática entre los segmentos Variables (V), de diversidad (D) y de unión (J) de la línea germinal de las inmunoglobulinas, como mecanismo de defensa del organismo frente a sustancias o antígenos extraños. Los anticuerpos irregulares son aquellos diferentes al sistema sanguíneo ABO y los más comúnmente encontrados en los donantes de sangre son anti-D, anti-E, anti-K y anti-M. Conclusiones: La importancia clínica de los anticuerpos irregulares en donantes se basa en su asociación con las reacciones hemolíticas, dada la capacidad que tienen los antígenos de algunos grupos sanguíneos para generar anticuerpos de tipo IgG que causan lisis prematura de los eritrocitos(AU)

Introduction: The immune system can recognize a large number of antigens when it is exposed to them; B Lymphocytes produces a great variety of antibodies, in order to generate the specificity of the receivers for the recognition of said antigens. The presence to irregular antibodies is one of the causes to the adverse reactions to the transfusion when for blood incompatibility between donor and receptor. Objective: To describe the genetics, structure and function of irregular antibodies in blood donors. Methods: A literature review was carried out, in English and Spanish, through databases such as Pubmed, ScienceDirect, NCBI, Redalyc and Scielo of articles published in the last 10 years. Analysis and synthesis of information: The immune system generates a great diversity of antibodies through the somatic recombination process between the Variable (V), diversity (D) and joining (J) segments of the germ line of immunoglobulins, as a defense mechanism of the organism against foreign substances or antigens. Irregular antibodies are those other than the ABO blood system and those most commonly found in blood donors are anti-D, anti-E, anti-K, and anti-M. Conclusions: The clinical significance of irregular antibodies in donors is based on their association with hemolytic reactions, due to the ability of antigens in some blood groups to generate IgG-type antibodies that cause premature erythrocyte lysis(AU)

Co-production of hydrogen and ethanol by Escherichia coli SS1 and its recombinant

Background: The development of a potential single culture that can co-produce hydrogen and ethanol is beneficial for industrial application. Strain improvement via molecular approach was proposed on hydrogen and ethanol co-producing bacterium, Escherichia coli SS1. Thus, the effect of additional copy of native hydrogenase gene hybC on hydrogen and ethanol co-production by E. coli SS1 was investigated. Results: Both E. coli SS1 and the recombinant hybC were subjected to fermentation using 10 g/L of glycerol at initial pH 7.5. Recombinant hybC had about 2-fold higher cell growth, 5.2-fold higher glycerol consumption rate and 3-fold higher ethanol productivity in comparison to wild-type SS1. Nevertheless, wild-type SS1 reported hydrogen yield of 0.57 mol/mol glycerol and ethanol yield of 0.88 mol/mol glycerol, which were 4- and 1.4-fold higher in comparison to recombinant hybC. Glucose fermentation was also conducted for comparison study. The performance of wild-type SS1 and recombinant hybC showed relatively similar results during glucose fermentation. Additional copy of hybC gene could manipulate the glycerol metabolic pathway of E. coli SS1 under slightly alkaline condition. Conclusions: HybC could improve glycerol consumption rate and ethanol productivity of E. coli despite lower hydrogen and ethanol yields. Higher glycerol consumption rate of recombinant hybC could be an advantage for bioconversion of glycerol into biofuels. This study could serve as a useful guidance for dissecting the role of hydrogenase in glycerol metabolism and future development of effective strain for biofuels production.

Enhanced alkaline catalase production by Serratia marcescens FZSF01: enzyme purification, characterization, and recombinant expression

Background: Catalase (CAT) is an important enzyme that degrades H2O2 into H2O and O2. To obtain an efficient catalase, in this study, a new strain of high catalase-producing Serratia marcescens, named FZSF01, was screened and its catalase was purified and characterized. Results: After optimization of fermentation conditions, the yield of catalase produced by this strain was as high as 51,468 U/ml. This catalase was further purified using two steps: DEAE-fast flow and Sephedex-G150. The purified catalase showed a specific activity of 197,575 U/mg with a molecular mass of 58 kDa. This catalase exhibited high activity at 20­70°C and pH 5.0­11.0. Km of the catalase was approximately 68 mM, and Vmax was 1886.8 mol/min mg. This catalase was further identified by LC­MS/MS, and the encoding gene was cloned and expressed in Escherichia coli BL21 (DE3) with a production of 17,267 ± 2037 U/ml. Conclusions: To our knowledge, these results represent one of the highest fermentation levels reported among current catalase-producing strains. This FZSF01 catalase may be suitable for several industrial applications that comprise exposure to alkaline conditions and under a wide range of temperatures.

RecET recombination system driving chromosomal target gene replacement in Zymomonas mobilis

Background: Zymomonas mobilis is a Gram-negative microaerophilic bacterium with excellent ethanol-producing capabilities. The RecET recombination system provides an efficient tool for direct targeting of genes in the bacterial chromosome by PCR fragments. Results: The plasmids pSUZM2a-RecET and pSUZM2a-RecE588T were first developed to co-express RecE or RecE588 and RecT for homologous recombination. Thereafter, the PCR fragments of the tetracycline resistance marker gene flanked by 60 bp of adhA (alcohol dehydrogenase I) or adhB (alcohol dehydrogenase II) homologous sequences were electroporated directly into ZM4 cells harboring pSUZM2a-RecET or pSUZM2a-RecE588T. Both adhA and adhB were replaced by the tetracycline resistance gene in ZM4, yielding two mutant strains, Z. mobilis ZM4 ΔadhA and Z. mobilis ZM4 ΔadhB. These two mutants showed varying extent of reduction in ethanol production, biomass generation, and glucose metabolism. Furthermore, enzyme activity of alcohol dehydrogenase II in Z. mobilis ZM4 ΔadhB exhibited a significant reduction compared to that of wild-type ZM4. Conclusion: This approach provided a simple and useful method for introducing mutations and heterologous genes in the Z. mobilis genome.

Effect of miR-125b on dermal papilla cells of goat secondary hair follicle

Background: MicroRNAs (miRNAs) are endogenous noncoding RNAs that regulate various biological processes. miR-125b is a miRNA that has been reported to be critical for hair follicle (HF) morphogenesis and development. We identified that the expression of miR-125b varies during an individual hair cycle (anagen, catagen, and telogen) in the skin of cashmere goats. We constructed a gain model (by overexpressing miR-125b) and a loss model (by inhibiting endogenous miR-125b) based on dermal papilla cells (DPCs) to further investigate the role of miR-125b in HF cycle. In addition, we used a dual-luciferase system to highlight the predicated target genes of miR-125b. Results: We found that miR-125b affects the expression of FGF5, IGF-1, SHH, TNF-α, MSX2, LEF-1, FGF7, NOGGIN, BMP2, BMP4, TGF-ß1, and ß-catenin. The dual-luciferase assay further validated a direct interaction between miR-125b and FGF5 and TNF-α. Conclusion: miR-125b affects the expression levels of genes related to hair cycle and may also play a critical role in regulating the periodic development of HF.

Establishment of a HEK293T cell line able to site-specifically integrate and stably express GDNF by rAAV-2 vector

Background: Using recombinant adeno-associated virus 2 (rAAV-2), we attempted to establish a HEK293T cell line that is able to site-specifically integrate and stably express glial cell line-derived neurotrophic factor (GDNF). Results:Recombinant vector with enhanced green fluorescent protein (EGFP) and GDNF (pTR-P5-EGFP-IRES-GDNF), as well as that carrying Rep genes and SV40 promoters (pSVAV2) were constructed and packed. HEK293T cells were co-infected with rAAV-2/EGFP-GDNF and rAAV-2/SVAV2 virus separately at 1 x 10(4),1 x 10(5),and 1x10(6) of multiplicity of infection (MOI). The efficiency of transduction was detected using flow cytometry. Additionally, the infected HEK293T cells were separately validated by touchdown polymerase chain reaction (PCR) and Western-blot. After 72 h of transduction, the rate of EGFP positive cell was 22%, 45% and 49% at the MOIs of 1 x 10(4),1 x 10(5) and 1 x 10(6), respectively. On the 3rd, 6th and 9th day of cell passage, there was no significant difference in the cell viability and proliferation rate between transduction and control groups. Importantly, touchdown PCR showed that there was a specific PCR amplified product band in the lane of infected cells. Furthermore, GDNF expression was detected in the infected cells after 15 and 180 d of cultivation. Conclusions: A HEK293T cell line able to site-specifically integrate and stably express GDNF was established.

Promoting inflammatory lymphangiogenesis by vascular endothelial growth factor-C (VEGF-C) aggravated intestinal inflammation in mice with experimental acute colitis

Angiogenesis and lymphangiogenesis are thought to play a role in the pathogenesis of inflammatory bowel diseases (IBD). However, it is not understood if inflammatory lymphangiogenesis is a pathological consequence or a productive attempt to resolve the inflammation. This study investigated the effect of lymphangiogenesis on intestinal inflammation by overexpressing a lymphangiogenesis factor, vascular endothelial growth factor-C (VEGF-C), in a mouse model of acute colitis. Forty eight-week-old female C57BL/6 mice were treated with recombinant adenovirus overexpressing VEGF-C or with recombinant VEGF-C156S protein. Acute colitis was then established by exposing the mice to 5% dextran sodium sulfate (DSS) for 7 days. Mice were evaluated for disease activity index (DAI), colonic inflammatory changes, colon edema, microvessel density, lymphatic vessel density (LVD), and VEGFR-3mRNA expression in colon tissue. When acute colitis was induced in mice overexpressing VEGF-C, there was a significant increase in colonic epithelial damage, inflammatory edema, microvessel density, and neutrophil infiltration compared to control mice. These mice also exhibited increased lymphatic vessel density (73.0±3.9 vs 38.2±1.9, P<0.001) and lymphatic vessel size (1974.6±104.3 vs 1639.0±91.5, P<0.001) compared to control mice. Additionally, the expression of VEGFR-3 mRNA was significantly upregulated in VEGF-C156S mice compared to DSS-treated mice after induction of colitis (42.0±1.4 vs 3.5±0.4, P<0.001). Stimulation of lymphangiogenesis by VEGF-C during acute colitis promoted inflammatory lymphangiogenesis in the colon and aggravated intestinal inflammation. Inflammatory lymphangiogenesis may have pleiotropic effects at different stages of IBD.

Estudo proteômico de variedades de milho ( Zea mays L. ) obtidas por melhoramento clássico e por recombinação genética / Proteomic study of maize ( Zea mays L. ) varieties obtained by classical breeding and genetic recombination.

O melhoramento genético clássico de sementes milho (Zea mays L.) permitiu desenvolver inúmeras variedades, incluindo o milho com qualidade proteica melhorada (Quality Protein Maize, QPM), que visava aumentar os teores proteicos e as propriedades nutricionais. Por outro lado, novas variedades comerciais foram obtidas por vegetais geneticamente modificados (GM), com foco em parâmetros agronômicos. Em ambos os casos, a segurança dessas variedades para uso como alimento é uma das principais preocupações dos desenvolvedores e dos órgãos de regulamentação. A Equivalência Substancial é a base do sistema de avaliação da segurança de culturas geneticamente modificadas, no entanto alterações na expressão de proteínas não são devidamente analisadas e esclarecidas. As abordagens proteômicas complementam as técnicas de avaliação de biossegurança para alimentos GM, bem como permitem investigar possíveis efeitos indesejáveis derivados do melhoramento clássico. Os objetivos do presente estudo foram caracterizar e comparar os perfis proteicos de variedades de milhos convencionais melhorados (QPM) e geneticamente modificados (GMs), contra suas respectivas linhas convencionais utilizando técnicas proteômicas como eletroforese bidimensional (2-DE) e bottom up shotgun (gel-free). Num primeiro estudo, foram utilizadas três amostras de milho, sendo duas variedades convencionais com QPM (QP1 e QP2) e uma variedade convencional normal (CN). No segundo estudo, foram analisadas duas cultivares de milho GM (GM1 e GM2) e seus respectivos convencionais genitores (CG1 e CG2). As composições químicas de todas as amostras também foram avaliadas quanto a Equivalência Substancial. O extrato bruto proteico foi submetido à análise de eletroforese unidimensional (1-DE), bidimensional (2-DE) e bottom up shotgun (gel-free). As imagens dos mapas proteicos foram analisadas pelo software Image Master 2D Platinum 7.0 (GE). Os spots diferencialmente expressos e selecionados foram sequenciados por MS. Pela composição química das principais frações das amostras de milho foi possível identificar a equivalência substancial entre as amostras convencionais e GMs, bem como QPMs e sua convencional dentro das faixas de variabilidade esperadas da espécie. Nos géis 1-DE foram observadas bandas proteicas com perfis similares entre os grupos de amostras avaliadas para ambos estudos. Nas imagens dos géis 2-DE não houveram alterações extremas entre as amostras de milhos GMs e seus respectivos convencionais genitores (CGs), mas apenas diferenças na intensidade dos spots proteicos. As variedades QPMs e CN apresentaram diferenças devido à distribuição dos spots. Os mapas proteicos das amostras CG1 x GM1 e CG2 x GM2 apresentaram maior semelhança com porcentagens de matchings superiores a 70 %, enquanto as porcentagens de matchings entre variedades diferentes (QPMs e CN) foram menores. No total foram identificadas 219 proteínas das amostras CGs x GMs e QPMs x CN, classificadas quanto aos seus processos biológicos e função molecular. Em conclusão, foram encontradas diferenças entre os cultivares GMs e CGs, indicando uma variação normal entre variedades de milho, que não comprometem a segurança alimentar das amostras estudadas. Quanto às amostras com QPM e CN as diferenças encontradas são devido à sua distância nas linhagens ou germoplasma

The classic genetic breeding of corn seeds (Zea mays) has enabled the development of many varieties, including corn with improved protein quality (Quality Protein Maize, QPM), which aimed to increase protein levels and nutritional properties. On the other hand, new commercial varieties have been obtained out of genetically modified (GM) vegetables, with a focus in agronomic parameters. In both cases, the safety of these varieties for food use is one of the main concerns for the developers and for the regulatory agencies. Substantial Equivalence is the basis of the safety evaluation system for genetically modified crops, however, alterations in the protein expressions are not been properly analyzed and clarified. The protein approaches complement the techniques of biosafety evaluation for GM foods, as well as allow for possible undesirable effects derived from classic improvement to be investigated. The goals of the current studies were to characterize and compare the protein profiles of the different varieties of conventionally improved (QPM) and genetically modified (GM) corn, against their respective conventional lines using proteomic techniques, such as, two-dimensional electrophoresis (2-DE), bottom up shotgun (gel-free) and masses spectrometry (MS). In a first instance of the study, three samples of corn were used, two of conventional varieties with QPM (QP1 and QP2) and one conventional normal variety (CN). In a second instance of the study, two cultures of GM corn (GM1 and GM2) were analyzed and their respective conventional genitors (CG1 and CG2). The chemical compositions of all the samples were also evaluated for their Substantial Equivalence. The protein raw extract was submitted to analysis of one-dimensional (1-DE), two-dimensional (2-DE) electrophoresis, and bottom up shotgun (gel-free). The protein image maps were analyzed by the Image Master 2D Platinum 7.0 (GE) software. The spots which were expressed and selected differentially were sequenced by MS. By the chemical composition of the main fractions of the samples of corn, it was possible to identify the substantial equivalence between the conventional samples and GMs, likewise with OPMs and their conventional in the ranges of variability which were expected for the species. On the 1-DE gel, it was observed protein bands with similar profiles amongst the groups of evaluated samples for both studies. In the images of the 2-DE gel, there were no alterations between the GM corn and their respective conventional genitors (CGs), but only differences in intensity of the protein spots. The OPM and CN varieties presented differences due to the distribution of the spots. The protein maps of samples CG1 vs. GM1 and CG2 vs. GM2 presented greater similarities with the percentages of matchings superior to 70%, while the percentage of matchings among different varieties (QPMs and CN) were smaller. In total, there were 219 proteins identified in the samples CGs vs. GMs and QPMs vs. CN, classified by the biologic processes and molecular function. In conclusion, there were found differences between the cultures of GMs and CGs, indicating a normal variation among the corn varieties, which do not affect the food security of the studied samples. As per the samples with QPM and CN, the differences found were due to the line distances or germplasm

A glycoprotein E gene-deleted bovine herpesvirus 1 as a candidate vaccine strain

A bovine herpesvirus 1 (BoHV-1) defective in glycoprotein E (gE) was constructed from a Brazilian genital BoHV-1 isolate, by replacing the full gE coding region with the green fluorescent protein (GFP) gene for selection. Upon co-transfection of MDBK cells with genomic viral DNA plus the GFP-bearing gE-deletion plasmid, three fluorescent recombinant clones were obtained out of approximately 5000 viral plaques. Deletion of the gE gene and the presence of the GFP marker in the genome of recombinant viruses were confirmed by PCR. Despite forming smaller plaques, the BoHV-1△gE recombinants replicated in MDBK cells with similar kinetics and to similar titers to that of the parental virus (SV56/90), demonstrating that the gE deletion had no deleterious effects on replication efficacy in vitro. Thirteen calves inoculated intramuscularly with BoHV-1△gE developed virus neutralizing antibodies at day 42 post-infection (titers from 2 to 16), demonstrating the ability of the recombinant to replicate and to induce a serological response in vivo. Furthermore, the serological response induced by recombinant BoHV-1△gE could be differentiated from that induced by wild-type BoHV-1 by the use of an anti-gE antibody ELISA kit. Taken together, these results indicated the potential application of recombinant BoHV-1 △gE in vaccine formulations to prevent the losses caused by BoHV-1 infections while allowing for differentiation of vaccinated from naturally infected animals.

Pleiotropic effects of the sdw1 locus in barley populations representing different rounds of recombination

Background In the present study populations, representing different rounds of recombination were used for the analysis of phenotypic effects associated with the sdw1/denso locus. Other studies have mostly focused only on one type of population. Many different QTLs mapped at the same position as the sdw1/denso locus may indicate a pleiotropy of this gene or a tight linkage between genes conditioning quantitative traits. To date, results of studies have not unequivocally proven either of these two phenomena. Results Both breeding and molecular mapping experiments were undertaken to examine 200 single seed descent (SSD) and 60 doubled haploid (DH) lines obtained from the Maresi (with a semi-dwarfing gene) and Pomo cross combination. They were evaluated for the type of juvenile growth habit and certain agronomic traits were measured after harvesting. The estimates of mean values, standard errors and significance of effects were analyzed. In terms of the analyzed characteristics, the greatest variability was obtained for genotypes with the prostrate growth habit. Microsatellite markers (SSR) were also used to identify co-segregation with the sdw1/denso locus and Bmag0013, Bmag0877, Bmag0306b markers were linked the closest. A partial linkage map of chromosome 3H with the sdw1/denso semi-dwarfing gene was constructed and QTLs were identified. Conclusions Our experiments confirmed the impact of the semi-dwarfing gene on plant height, heading and flowering date both in SSD and DH populations, which may indicate pleiotropy. Moreover, a partial linkage between sdw1/denso locus and grain weight per spike and 1000-grain weight was found in the SSD population.

Discrimination of population of recombinant inbred lines of rye (Secale cereale L. ) for different responses to nitrogen-potassium stress assessed at the seedling stage under in vitro conditions

Background: Plants differ in the methods used to acquire nutrients from environments with low nutrient availability, and may change the morphology of their ‘root architecture’ to be able to take up nutrients. Results: In the present study rye response to stress caused by high and low nitrogen-potassium treatments in mature embryos cultures was described within a population consisting of one hundred and thirty eight recombinant inbred lines of rye. Characterization of the response of recombinant inbred lines (RILs) to nutrient stress was presented as the results of analyses of morphological traits, and physiological and biochemical parameters of the seedlings grown in both treatments. A wide range of variability of individual RILs to induced stress was observed in the population of recombinant inbred lines, and was presented as the difference between the means of each of the analysed traits described at high- and low-nitrogen-potassium levels. Lines were grouped using Ward's agglomerative method on the basis of differences in coleoptyle length, with the longest root length and root number used as variables. Conclusions: Recombinant inbred lines at low nitrogen-potassium treatment developed: longer, shorter, or roots of similar length in comparison with the high nitrogen-potassium treatment. Discriminant function analysis showed that the discriminant variable able to clearly differentiate recombinant inbred lines in terms of their response to nutrient stress was the trait of the longest root length.

Disseminação da resistência a antimicrobianos em cepas clínicas e ambientais de Enterobacteriaceae: identificação e mapeamento do ambiente genético de Genes Codificadores de ESBL / Spread of antimicrobial resistance in Enterobacterizceae clinical and environmental strains identification and genetic environment mapping of ESBL Encoding Genes

Introdução. A resistência bacteriana é facilitada pela pressão seletiva do uso de antimicrobianos na clínica e em outras atividades, como a agricultura e pecuária, além de poder ser disseminada para a natureza por meio do lançamento inadequado do esgoto ou pela aplicação do lodo de esgoto na agricultura. As beta-lactamases de espectro estendido (ESBL) são uma das formas mais prevalentes de resistência em Gram negativo no mundo, e seus genes codificadores são disseminados por meio de diversos elementos genéticos, principalmente transposons e integrons mobilizados para plasmídios. Objetivo. Identificar e caracterizar genes codificadores de ESBL, bem como suas prováveis formas de mobilização, em enterobactérias isoladas de fontes ambientais e clínicas. Material e métodos. Quarenta e cinco cepas isoladas de um hospital público em 2004 e 2005, responsáveis por infecções hospitalares (14), infecções comunitárias (7) e colonizações (24), e 7 isoladas de estações de tratamento de esgoto (ETE) em 2009, em São Paulo, geneticamente distintas e produtoras de ESBL da família Enterobacteriaceae, foram estudadas. A técnica de PCR seguida de seqüenciamento foi utilizada para a identificação dos genes blaESBL, triagem de elementos móveis e mapeamento do ambiente genético blaESBL. A identificação dos grupos de incompatibilidade plasmidial (Inc) foi realizada pela técnica de PBRT, e a determinação dos tamanhos dos plasmídios pela técnica S1-PFGE. Os genes blaESBL identificados foram: amostras clínicas - blaTEM-15, blaTEM-197, blaSHV-5, blaSHV-12, blaSHV-27, blaSHV-28, blaSHV-45, blaSHV-55, blaSHV-110, blaCTX-M-2, blaCTX-M-59, blaCTX-M-131; amostras ambientais - blaSHV28, blaCTX-M-15, bla-CTX-M-8. Os genes blaTEM-15 e blaTEM-197 estavam associados aos elementos Tn2* e Tn3, respectivamente. Os genes blaSHV-5, e blaSHV-12 estavam associados à IS26, e não foi possível determinar o ambiente genético dos demais genes blaSHV.Os genes blaCTX-M-2, blaCTX-M-59 e blaCTX-M-131 estavam inseridos em integrons de classe 1 complexos, blaCTX-M-15 estava associado à ISEcpl interrompida pela IS26, e blaCTX-M-8 estava associado à IS10, também interrompida pela IS26. Os principais grupos Inc detectados foram IncA/C (trinta e sete por cento) e IncF (trinta vírgula quatro por cento). Exceto por 7 cepas clínicas, todas apresentavam plasmídios de alto peso molecular, entre 48,5kb e 388kb. Conclusões. Este estudo detectou 15 genes blaESBL diferentes, dos quais dois são genes novos.

Correlación genotipo-fenotipo y análisis molecular en pacientes con síndrome Down / Correlation genotype-phenotype and molecular analysis in patients with Down syndrome / Correlação genótipo-fenótipo e análise molecular em pacientes com síndrome de Down

El síndrome Down (SD) es la trisomía más común en humanos, presentándose en 1 de cada 745 nacidos vivos y es la causa más frecuente de retardo mental. El origen más observado de la trisomía es una no disyunción meiótica (95%), la cual generalmente es de origen materno, mientras un 5% se debe a errores post-cigóticos mitóticos. Objetivo: identificar el origen parental del cromosoma 21 extra, el momento del error no disyuncional y establecer una correlación entre estos eventos y las manifestaciones fenotípicas de los pacientes afectados. Materiales y métodos: se estudiaron cincuenta familias con un hijo con SD mediante el uso de cinco short tandem repeats (STR) a lo largo de 21q, se construyeron los haplotipos de cada paciente y sus padres, determinando el origen parental y el momento en que surgió el error no disyuncional. Resultados: en 80% de las familias el error fue en meiosis I y 20% en la meiosis II; 98% de los cromosomas adicionales fue de origen materno y 2% paterno. Se encontró correlación genotipo-fenotipo en ocho características estudiadas: cuello corto y ancho, tercera fontanela, labio inferior prominente, paladar estrecho y corto, raíz del hélix cruzando la concha, alopecia, pliegue único palmar y otras anomalías como nevus y xeroderma y eventos de recombinación en 24,5% de las familias analizadas. Conclusiones: la edad materna y la variación en el número de recombinaciones está asociada con no disyunciones meióticas I y II; se encontró correlación entre el momento del error no disyuncional y algunas variables clínicas.

Down Syndrome (DS) is the most common trisomy in human beings. Its incidence is estimated in one of 745 live births. On a global scale, it is the most frequent cause of mental retardation. The origin of this trisomy is due to a meiotic non-disjunction in about 95% of cases and is usually maternal, especially in women above 35 years of age. The remaining 5% is due to errors in post-zygotic mitosis. Objective: identify the parental origin of the extra chromosome 21, when the error is not disyuncional and establish a correlation between these events and phenotypic manifestations of the patients affected. Materials and methods: we studied fifty families with a child with DS, using 5 STRs markers along 21q which allowed identification of the origin of chromosome 21 additional parents, the time when the error occurred and recombination presents. The statistical analysis was done using the package SPSS version 15.0 for Windows. Results: in 80% of households in the error was meiosis I and 20% in meiosis II, 98% of the additional chromosomes was home maternal and paternal 2% similar to those reported by other authors, correlation was found genotype-phenotype characteristics studied at 8, neck short and wide, third fontanel, prominent lower lip, palate narrow and short, crossing hélix root of the shell, alopecia, single palm crease and other anomalies as nevi and xeroderma and recombination events in 24,5% of the families tested. Conclusions: the maternal age and variation in the number of recombination is not associated with disjunctions meiotics I and II genotype phenotype correlation was found, but the sample size should be expanded in order to establish with certainty that the correlations.

O síndrome de Down (SD) é a trissomia mais comum em humanos, apresentando-se em 1 de cada 745 nascidos vivos e é a causa mais frequentes de retardo mental. A origem mais observada da trissomia é uma não-disjunção meiótica (95%), a qual geralmente é de origem materna, enquanto um 5% se deve a erros pós-zigoticos mitóticos. Objetivo: identificar a origem parental do cromossoma 21 extra, o momento do erro não-disjuncional e estabelecer uma correlação entre estes eventos e as manifestações fenotípicas dos pacientes afetados. Materiais e métodos: se estudaram cinquenta famíliascom um filho com SD mediante o uso de cinco short tandem repeats (STR) ao longe de 21q, se construíram os haplótipos de cada paciente e seus pais, determinando a origem parental e o momento em que surgiu o erro não-disjuncional. Resultados: em 80% das famílias o erro foi em meiose I e 20% na meiose II; 98% dos cromossomas adicionais foi de origem materno e 2% paterno. Encontrou-se correlação genótipo-fenótipo em oito características estudadas: pescoço curto e amplo, terceira fontanela, lábio inferior proeminente, paladar apertado e curto, raiz da hélix a través da concha, alopecia, prega palmar única e outras anomalias como nevus e xeroderma e eventos de recombinação em 24,5% das famílias analisadas. Conclusões:a idade materna e a variação no número de recombinações está associada com não-disjunções meióticas I e II; encontrou-se correlação entre o momento do erro não disjuncional e algumas variáveis clínicas.

Partial VP1 sequencing of Brazilian infectious bursal disease virus strains

Infectious bursal disease virus (IBDV) is classified according to the antigenicity and virulence into classical virulent (cv), very virulent (vv), and antigenic variant strains. The molecular basis for the IBDV antigenic variation is well established and is associated to the capsid protein, VP2 (gene VP2 of segment A), whereas both VP2 and the RNA-dependent RNA polymerase, VP1 (gene VP1 of segment B), have been correlated with the virulence. In this study, seventeen Brazilian IBDV samples previously characterized by the VP2 gene as cv (three) and vv (fourteen) strains were genetically and molecularly analyzed for their VP1 gene. All of the strains kept with the same cv or vv classification except one sample, Br/03/DR. This sample was classified as vv by its VP2 gene, but it was most closely related to the cv strains by its VP1 partial sequence and phylogeny. Studies on the phylogeny of VP1 have suggested a possible reassortment event that originated the vvVP1. In this case, the sample carrying vvVP2 and cvVP1 could be a descendant of IBDV ancestors prior to the reassortment of vvVP1; alternatively, it could be the result of a genetic exchange between the segments of different strains or with a live attenuated vaccine. Nevertheless, this is the first report of natural genetic reassortment of IBDV in Brazil.

Pérdida de heterocigocidad e identificación de portadoras de distrofia muscular de Duchenne: un caso familiar con evento de recombinación / Loss of heterozygosity and carrier identification in Duchenne muscular dystrophy: a familiar case with recombination event / Perda de heterozigosidade e identificação de portadoras de distrofia muscular de Duchenne: um caso familiar com evento de recombinação

La distrofia muscular de Duchenne y Becker (DMD/DMB) es una entidad de herencia recesiva ligada al cromosoma X que se presenta con debilidad muscular y es causada por mutaciones en el gen de la distrofina. La pérdida de heterocigocidad permite identificar a las mujeres portadoras de deleción en el gen de la distrofina mediante haplotipos. Objetivo: identificar mujeres portadoras en una familia con un paciente afectado por DMD mediante análisis de pérdida de heterocigocidad. Materiales y métodos: se analizaron nueve miembros de una familia con un afectado de DMD. Se hizo extracción de ADN y amplificación de diez STR del gen de la distrofina; se construyeron haplotipos, y se determinó el estado de portadora de deleción en dos de las seis mujeres analizadas, quienes mostraron pérdida de heterocigocidad de tres STR. Se establecieron algunos eventos de recombinación. Resultados: dos de las seis mujeres analizadas, mostraron pérdida de heterocigocidad en tres de los diez STR genotipificados, indicando su estado de portadora de deleción en este fragmento del gen de la distrofina. Con la segregación familiar de los haplotipos se establecieron eventos de recombinación. Conclusiones: mediante pérdida de heterocigocidad es posible establecer el estado de portadora de deleción en el gen de la distrofina con un 100% de certeza. La construcción de haplotipos identifica el cromosoma X portador de la deleción en familiares del caso índice. Se evidenció un evento de recombinación en una de las hermanas del afectado, lo que hace indeterminado su estado de portadora.

Duchenne/Becker Muscular Dystrophy (DMD/BMD) is an X-linked recessive disease characterized by muscular weakness. It is caused by mutations on the dystrophin gen. Loss of heterozygosity allows us to identify female carriers of deletions on the dystrophin gen. Objective: identify female carriers in a family with a patient affected by DMD. Material and methods: nine family members and the affected child were analyzed using DNA extraction and posterior amplification of ten STRs on the dystrophin gen. Haplotypes were constructed and the carrier status determined in two of the six women analyzed due to loss of heterozygosity in three STRs. Additionally, we observed a recombination event. Conclusions: loss of heterozygosity allows us to establish with a certainty of 100% the carrier status of females with deletions on the dystrophin gen. By the construction of haplotypes we were able to identify the X chromosome with the deletion in two of the six women analyzed. We also determined a recombination event in one of the sisters of the affected child. These are described with a high frequency (12%). A possible origin for the mutation is a gonadal mosaicism in the maternal grandfather or in the mother of the affected child in a very early stage in embryogensis. This can be concluded using the analysis of haplotypes.

A distrofia muscular de Duchenne e Becker (DMD/DMB) é uma entidade de herança recessiva ligada ao cromossoma X que se apresenta com debilidade muscular e é causada por mutações no gene da distrofia. A perda de heterozigosidade permite identificar às mulheres portadoras de deleção no gene da distrofina mediante haplótipos. Objetivo: identificar mulheres portadoras em uma família com um paciente afetado de DMD mediante análises de perda de heterozigosidade. Materiais e métodos: se analisaram nove membros de uma família com um afetado de DMD. De fez extração de ADN e amplificação de dez STR do gene da distrofina; construíram-se haplótipos, e determinou-se o estado de portadora de deleção em duas das seis mulheres analisadas, as quais mostraram perda de heterozigosidade de três STR. Estabeleceram-se alguns eventos de recombinação. Resultados: duas das seis mulheres analisadas mostraram perda de heterozigosidade em três dos dez STR genotipados, indicando seu estado de portadora de deleção neste fragmento do gene da distrofina. Com a segregação familiar dos haplótipos se estabeleceram eventos de recombinação. Conclusões: mediante perda de heterozigosidade é possível estabelecer o estado de portadora de deleção no gene da distrofina com um 100% de certeza. A construção de haplótipos identifica o cromossoma X portador da deleção em familiares do caso índice. Evidenciou-se um evento de recombinação em uma das irmãs do afetado, o que faz indeterminado seu estado de portadora.

Desenvolvimento de sistemas de genética reversa para os vírus da doença de gumboro e influenza aviária através do uso de recombinação homóloga em levedura / Development of reverse genetics systems for infectious bursal disease virus and avian influenza by yeast-based homologous recombination

A Doença de Gumboro (DG) é uma doença imunossupressora comum em aves jovens infectadas pelo Vírus da Doença de Gumboro (Infectious Bursal Disease Vírus, IBDV), sendo responsável por perdas econômicas no setor avícola. O vírus influenza apresenta-se com um alto nível de mutação, o que resulta no surgimento de vírus imunologicamente distintos capazes de causar pandemias ou epidemias. Entende-se por sistema de genética reversa viral (SGRV) a geração/recuperação de vírus por meio da transfecção celular do cDNA viral clonado ou seu RNA viral transcrito in vitro. SGRV pode ser usado na elucidação dos mecanismos de replicação do influenza e IBDV, e aplicações biotecnológicas como desenvolvimento de vacinas. Diante desse levantado, objetivou-se a construção de dois SGRVs por recombinação homóloga em levedura (RHL): um para IBDV e outro para influenza aviária (IA). Para o SGRV do IBDV, IBDV foi isolado no Brasil, teve seu genoma amplificado e clonado por RHL no vetor pJG-CMV-HDR. Os clones foram transfectados em fibroblasto de embrião de galinha (FEG) e o vírus gerado (IC-IBDVBr) mostrou estabilidade gênica e fenótipo similar ao vírus parental. A geração e crescimento do IC-IBDVBr não foram possíveis em células Vero. Para o SGRV do IA, IA foi isolado no Brasil, seu genoma foi amplificado e clonado em pDrive/pGEM-T Easy e depois subclonado por RHL no vetor pJGCh2008. Os clones em pJG-Ch2008 responsáveis pela codificação das proteínas do complexo polimerase viral (CPV) foram transfectados simultaneamente em células Human Embryonic Kidney 293T com plasmídeos contendo o gene repórter red fluorescent protein ou Gaussia luciferase, ambos flanqueados pela untransleated region do influenza. A funcionalidade do CPV do IA foi verificada pela expressão de RFP e GLuc. A recuperação do IA em FEG pelos clones em pJG-Ch2008 não foi possível. A funcionalidade do CPV mais a integridade dos clones indicam que a recuperação do IA não foi possível provavelmente devido à eficiência da transfecção celular. A construção do SGRV para IBDV, o primeiro do mundo feito por RHL e o primeiro desenvolvido no Brasil, junto com os passos iniciais para a construção do primeiro SGRV para influenza feito por RHL e a consequente construção do CPV por essa tecnologia, disponibilizam ao país ferramentas capazes de contribuir no esclarecimento do ciclo replicativo de ambos os vírus, além de criar bases para o futuro desenvolvimento de vacinas e vetores virais.

Limited vegetative compatibility as a cause of somatic recombination in Trichoderma pseudokoningii

With the aim of a better characterization of the somatic recombination process in Trichoderma pseudokoningii, a progeny from crossings between T. pseudokoningii strains contrasting for auxotroph markers was characterized by RAPD markers and PFGE (electrophoretic karyotype). Cytological studies of the conidia, conidiogenesis and heterokaryotic colonies were also performed. The genotypes of the majority of the recombinant strains analyzed were similar to only one of the parental strains and the low frequency of polymorphic RAPD bands suggested that the nuclear fusions may not occur into the heterokaryon. In some heterokaryotic regions the existence of intensely staining hyphae might be related to cell death. We proposed that a mechanism of somatic recombination other than parasexuality might occur, being related to limited vegetative compatibility after postfusion events, as described for other Trichoderma species.

Construction of recombinant Bacillus subtilis strains for efficient pimelic acid synthesis

As a precursor, pimelic acid plays an important role in biotin biosynthesis pathway of Bacillus subtilis. Fermentations supplemented with pimelic acid could improve the production of biotin, however, with a disadvantage-high cost. So it is necessary to improve the biosynthesis of pimelic acid via genetic engineering in B. subtilis. In this study, we constructed a recombinant B. subtilis strain for improving the synthesis of pimelic acid, in which a maltose-inducible Pglv promoter was inserted into the upstream of the cistron bioI-orf2-orf3 and, meanwhile, flanked by the tandem cistrons via a single crossover event. The copy number of the integrant was amplified by high-concentration resistance screen and increased to 4-5 copies. The production of pimelic acid from multiple copies integrant was about 4 times higher than that from single copy (1017.13 ug/ml VS. 198.89 μg/ml). And when induced by maltose the production of pimelic acid was about 2 times of that under non-induction conditions (2360.73 μg/ml VS. 991.59 ug/ml). Thus, these results demonstrated that the production of pimelic acid was improved obviously through reconstructed B. subtilis. It also suggested that our expression system provided a convenient source of pimelic acid that would potentially lower the cost of production of biotin from engineered B. subtilis.

Desenvolvimento de micobacteriófago recombinante para detecção rápida de bacilos da tuberculose / Development of recombinant micobacteriophage for rapid detection of tubercle bacillus

O diagnóstico da tuberculose por métodos tradicionais é lento e laborioso. Por outro lado, os testes moleculares são rápidos, mas com custo elevado para países em desenvolvimento. Este projeto teve o objetivo de inserir no micobacteriófago D29 o gene que codifica a proteína verde fluorescente (eGFP) e estudar o fago recombinante na detecção rápida de bacilos da tuberculose. Para tanto, foi inserido o cassete Hsp60- eGFP no genoma do fago D29 por recombinação. Micobacteriófagos recombinantes purificados foram utilizados para infectar M. smegmatis mc2 155 e M. tuberculosis H37Rv durante um período de 1- 6h nas temperaturas de 30°C, 37°C e 42°C. Bactérias fluorescentes foram observadas em um período de 2h, mas em número reduzido, indicando que o micobacteriófago lisou às células rapidamente, dificultando a expressão da eGFP e visualização em microscópio de fluorescência. A deleção do gene LysA, foi efetuada a fim de aumentar o período de latência do fago. Não foi possível a purificação de fagos recombinantes, devido à baixa quantidade de recombinantes nos halos de inibição. Será necessário a redução da atividade o gene LysA e, provavelmente, de outros genes associados a lise celular a fim de aumentar a concentração de eGFP no interior da célula.

Classical biochemical methods for Mycobacterium tuberculosis identification are lengthy and time-consuming. On the other hand, molecular assays are rapid but expensive for developing countries. This project aimed to insert into the mycobacteriophage D29, the gene coding for the green fluorescent protein (eGFP) and use the recombineered phage to detect Mycobacterium tuberculosis rapidly and less costly. For that, the Hsp-eGFP cassette was inserted into D29 genome. Recombineered mycobacteriophages was purified and used to infect M. smegmatis mc2 155 and M. tuberculosis H37Rv from 1-6 hs at 30°C, 37°C and 42°C. Observation of fluorescent bacteria was difficult and only a small number of them were seen at 2 hs of infection. This indicated that recombineered bacteriophages were lysing cells rapidly. Deletion of LysA gene, was carried out to increase the time needed for bacterial lysing. it was not possible to purify mutant mycobacteriophages due to the low concentration of recombinant phages. We conclude that might be necessary the deletion of other genes such as LysB, a gene also involved in cell lysis and reduction LysA activity to increase the concentration of eGFP inside cells.

Perfil genômico dos poliovírus de origem vacinal isolados de casos de paralisias flácidas agudas, no Brasil, no período pós-eliminação dos poliovírus selvagens da região das Américas / Genomic profiling of poliovirus vaccine origin isolated from cases of acute flaccid paralysis in Brazil in the post-elimination of wild poliovirus from the Americas

A poliomielite (poliomielite anterior aguda, paralisia infantil) é uma doença infecciosa de caráter agudo que ocorre seguida a uma infecção causada por um dos três sorotipos de poiliovírus, denominados poliovírus tipos 1,2 e 3. em 1988, quando os poliovírus selvagens eram endêmicos em 125 paises ficou estabelecida durante a 41ª Assembléia Mundial da Saúde, em Genebra, a meta da erradicação da poliomielite até o ano 2000. os poliovirus selvagens estão hoje restritos a apenas quatro países (Nigéria, Afeganistão, Paquistão e Índia). Este grande sucesso é atribuído à utilização sistemática da vacina oral contra a poliomielite (VOP), desenvolvida pelo Dr. Albert Sabin. Esta vacina, licenciada nos anos 1960s, e que vem sendo utilizada por mais de quatro décadas, consiste de variantes atenuadas de cada um dos três sorotipos de poliovirus. Por ser uma vacina constituída por vírus vivos atenuados, os problemas a ela associados estão principalmente ligados à sua instabilidade genética e a possibilidade do aparecimento de mutações e recombinações nas subpopulações virais excretadas. Durante a replicação do vírus vacinal em humanos, freqüentemente ocorre reversão de algumas substituições nucleotídicas que conferem o fenótipo atenuado. Essa é a principal causa do aparecimento de raros casos de poliomielite associados à vacina (VAPP), relatodos em diferentes países, assim como surtos de poliomielite paralítica devidos à infecção por estes vírus vacinais derivados (PVDV) que possuem propriedades biológicas semelhantes aos poliovírus selvagens. A análise e caracterização de quatro regiões distintas do genoma viral (5’NC, VP1, 2C e 3D), dos poliovírus vacinais isolados no Laboratório de Enterovírus do Instituto Oswaldo Cruz, a partir de amostras clínicas de casos de paralisia flácida aguda que ocorreram no Brasil, no período de 1995 a 2007, constituíram no principal objetivo do presente trabalho. Um total de 177 amostras dos três sorotipos foi analisado por sequenciamento nucleoitidico em todo o gene que codifica a VP1; 222 amostras foram analisadas por duplex RT-PCR nas regiões 2C e 3D; 68 amostras foram analisadas na região 51-NC e 44 amostras foram analisadas nas 4 regiões (5’NC, VP1, 2C e 3D). Dois isolados de PV2, apresentando mais de 1 porcento de mutação em VP1, foram identificados e classificados como PVDV2. Existem aproximadamente 40 relatos de PVDV relacionados a pacientes imunodeficientes de 1962 a 2010, globalmente distribuídos, porém nenhum identificado no Brasil. Das 68 amostras seqüenciadas na região 5’NC visando à avaliação de uma importante posição nucleotídica envolvida na atenuação da neurovirulência em cada um dos 3 sorotipos (PV1480, PV2481 e PV3472), os seguintes resultados foram encontrados: PV1=18,5 porcento mutadas na posição 480, PV2=65 porventomutadas em 481 e PV3=81 porcento mutadas em 472. recombinação (em 2C/3D) foi encontrada em 15 amostras: 1 PV1 (1,3 porcento), 5 PV2 (6,6 porcento) e 9 PV3 (13,2 porcento). Os três sorotipos de poliovírus apresentaram comportamento distinto em relação às análises realizadas, sendo o sorotipo 3 o menos estável em relação ao padrão de recombinação e reversão à neurovirulência seguido pelo sorotipo 2 e o sorotipo 1 foi o mais estável. A monitoração do perfil genômico dos poliovírus vacinais em circulação é essencial no estágio final de erradicação global da poliomielite.