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1.
Microb Ecol ; 87(1): 114, 2024 Sep 11.
Artigo em Inglês | MEDLINE | ID: mdl-39259373

RESUMO

Biofilms are considered a basal resource with high nutritional quality in stream food webs, as periphytic algae are abundant of polyunsaturated fatty acids (PUFAs). PUFAs are essential for growth and reproduction of consumers who cannot or have very limited capacity to biosynthesize. Yet, how the nutritional quality based on PUFA of basal food sources changes with light intensity remains unclear. We conducted a manipulative experiment in mesocosms to explore the response and mechanisms of nutritional quality to shading, simulating riparian restoration. We found a significant increase in PUFA% (including arachidonic acid, ARA) under shading conditions. The increased PUFA is caused by the algal community succession from Cyanobacteria and Chlorophyta to Bacillariophyta which is abundant of PUFA (especially eicosapentaenoic acid, EPA; docosahexaenoic acid, DHA). On the other hand, shading increased PUFA via upregulating enzymes such as Δ12 desaturase (FAD2, EC:1.14.19.6) and 3-ketoacyl-CoA synthase (KCS, EC:2.3.1.199) in the biosynthesis of unsaturated fatty acid elongation pathways. Our findings imply that riparian reforestation by decreasing light intensity increases the nutritional quality of basal resources in streams, which may enhance transfer of good quality carbon to consumers in higher trophic levels through bottom-up effects.


Assuntos
Ácidos Graxos Insaturados , Cadeia Alimentar , Luz , Rios , Rios/microbiologia , Rios/química , Ácidos Graxos Insaturados/análise , Ácidos Graxos Insaturados/metabolismo , Cianobactérias/metabolismo , Cianobactérias/crescimento & desenvolvimento , Clorófitas/metabolismo , Clorófitas/crescimento & desenvolvimento , Diatomáceas/metabolismo , Diatomáceas/crescimento & desenvolvimento , Valor Nutritivo
2.
Nat Commun ; 15(1): 7674, 2024 Sep 03.
Artigo em Inglês | MEDLINE | ID: mdl-39227593

RESUMO

The circadian clock of cyanobacteria, which predicts daily environmental changes, typically includes a standard oscillator consisting of proteins KaiA, KaiB, and KaiC. However, several cyanobacteria have diverse Kai protein homologs of unclear function. In particular, Synechocystis sp. PCC 6803 harbours, in addition to a canonical kaiABC gene cluster (named kaiAB1C1), two further kaiB and kaiC homologs (kaiB2, kaiB3, kaiC2, kaiC3). Here, we identify a chimeric KaiA homolog, named KaiA3, encoded by a gene located upstream of kaiB3. At the N-terminus, KaiA3 is similar to response-regulator receiver domains, whereas its C-terminal domain resembles that of KaiA. Homology analysis shows that a KaiA3-KaiB3-KaiC3 system exists in several cyanobacteria and other bacteria. Using the Synechocystis sp. PCC 6803 homologs, we observe circadian oscillations in KaiC3 phosphorylation in vitro in the presence of KaiA3 and KaiB3. Mutations of kaiA3 affect KaiC3 phosphorylation, leading to growth defects under both mixotrophic and chemoheterotrophic conditions. KaiC1 and KaiC3 exhibit phase-locked free-running phosphorylation rhythms. Deletion of either system (∆kaiAB1C1 or ∆kaiA3B3C3) alters the period of the cellular backscattering rhythm. Furthermore, both oscillators are required to maintain high-amplitude, self-sustained backscatter oscillations with a period of approximately 24 h, indicating their interconnected nature.


Assuntos
Proteínas de Bactérias , Peptídeos e Proteínas de Sinalização do Ritmo Circadiano , Ritmo Circadiano , Synechocystis , Proteínas de Bactérias/metabolismo , Proteínas de Bactérias/genética , Synechocystis/genética , Synechocystis/metabolismo , Synechocystis/fisiologia , Peptídeos e Proteínas de Sinalização do Ritmo Circadiano/genética , Peptídeos e Proteínas de Sinalização do Ritmo Circadiano/metabolismo , Fosforilação , Ritmo Circadiano/genética , Ritmo Circadiano/fisiologia , Relógios Circadianos/genética , Relógios Circadianos/fisiologia , Regulação Bacteriana da Expressão Gênica , Família Multigênica , Cianobactérias/genética , Cianobactérias/metabolismo , Cianobactérias/fisiologia
3.
Harmful Algae ; 138: 102684, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-39244227

RESUMO

Grand Lake St. Marys (GLSM) is a large, shallow, hypereutrophic lake situated in an agricultural watershed with high-nutrient, non-point source runoff. The resulting harmful algal blooms (HABs) are typically dominated by Planktothrix, which can produce microcystin, a potent cyanobacterial toxin that has varied in concentration over the past decade. Some drivers of bloom biomass and toxicity in GLSM are described, but recent years (2019-2022) have exhibited anomalous combinations of winter ice cover and spring runoff, suggesting that additional factors contribute to variability in HAB severity and toxicity. 2020 and 2022 were typical water years, with normal tributary runoff volumes occurring primarily in late winter and spring after either little to no ice cover (2019-2020) or heavy/prolonged ice cover (2021-2022). However, 2021 exhibited prolonged winter ice and low winter/spring runoff. 2020 and 2022 were typical bloom years, with near monoculture, Planktothrix-dominated biomass (11 to 405 µg/L total chlorophyll) and high total concentrations of microcystins (<0.3 to 65 µg/L). However, the first half of 2021 exhibited lower biomass (18 to 65 µg/L chlorophyll a) and toxin concentrations (0.4 to 2.0 µg/L). While biomass returned to bloom levels when external tributary loading increased, ammonium uptake and regeneration rates and microcystin concentrations remained low throughout 2021 (in contrast to other years). Overall, potential ammonium uptake rates strongly correlated with chlorophyll and microcystin concentrations (Bayesian R2 = 0.59; 95% CI = 0.44 to 0.65). Phytoplankton diversity was higher in 2021 than other years, especially in spring/early summer, with increased dinoflagellates and diatoms in spring, followed by a mixed cyanobacterial assemblage in summer. These results suggest that lower external nutrient loads can drive immediate positive impacts on water quality, such as reduced HAB biomass and toxicity and higher phytoplankton diversity, even in hypereutrophic, shallow lakes.


Assuntos
Proliferação Nociva de Algas , Lagos , Microcistinas , Estações do Ano , Lagos/química , Lagos/microbiologia , Microcistinas/análise , Biomassa , Monitoramento Ambiental , Planktothrix , Fitoplâncton/fisiologia , Cianobactérias/fisiologia , Cianobactérias/crescimento & desenvolvimento , Camada de Gelo
4.
Harmful Algae ; 138: 102703, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-39244238

RESUMO

The proliferation of filamentous cyanobacteria in lakes can result in the generation of odor-causing compounds, predominantly 2-methylisoborneol (2-MIB), which pose odor-related challenges. In an effort to elucidate the spatiotemporal dynamics of 2-MIB and related influencing factors in East Lake Taihu, monthly investigations were undertaken from April 2022 to March 2023. In addition to the monthly survey, a whole-lake survey was conducted during the high-temperature period from July to September. The monthly survey revealed a distinct unimodal fluctuation in the concentration of 2-MIB in East Lake Taihu, with an average concentration at 297.0 ng/L during the high-temperature period. During the high-temperature period, the filamentous cyanobacterial communities detected in East Lake Taihu consisted primarily of species belonging to genera Leptolyngbya, Oscillatoria, Planktothricoides, and Pseudanabaena. However, no significant correlations were found between their densities and 2-MIB concentration. In addition, the mic gene was predominantly detected in genera Pseudanabaena and Planktothricoides, with the latter being the primary contributor to 2-MIB production. Furthermore, a succession of cyanobacteria capable of producing 2-MIB was detected, with water temperature and radiation intensity being identified as the primary driving factors. The temporal variation of 2-MIB concentration within East Lake Taihu during the whole year was primarily modulated by factors such as water temperature, water transparency, dissolved oxygen, and chlorophyll-a. During the high-temperature period, the 2-MIB concentration in the alga-dominated zone of East Lake Taihu was approximately 1.7 times greater than that in the macrophyte-dominated zone, with nutrient and transparency being identified as the main influencing factors. Consequently, our findings are of great significance for monitoring the sources and variation of 2-MIB in shallow lakes, providing a scientific foundation and theoretical guidance for odor management.


Assuntos
Canfanos , Cianobactérias , Lagos , Lagos/microbiologia , Lagos/química , Cianobactérias/metabolismo , China , Canfanos/análise , Poluentes Químicos da Água/análise , Monitoramento Ambiental , Análise Espaço-Temporal
5.
Harmful Algae ; 138: 102683, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-39244242

RESUMO

Toxic cyanobacterial blooms impose a health risk to recreational users, and monitoring of cyanobacteria and associated toxins is required to assess this risk. Traditionally, monitoring for risk assessment is based on cyanobacterial biomass, which assumes that all cyanobacteria potentially produce toxins. While these methods may be cost effective, relatively fast, and more widely accessible, they often lead to an overestimation of the health risk induced by cyanotoxins. Monitoring methods that more directly target toxins, or toxin producing genes, may provide a better risk assessment, yet these methods may be more costly, usually take longer, or are not widely accessible. In this study, we compared six monitoring methods (fluorometry, microscopy, qPCR of 16S and mcyE, ELISA assays, and LC-MS/MS), of which the last three focussed on the most abundant cyanotoxin microcystins, across 11 lakes in the Netherlands during the bathing water season (May-October) of 2019. Results of all monitoring methods significantly correlated with LC-MS/MS obtained microcystin levels (the assumed 'golden standard'), with stronger correlations for methods targeting microcystins (ELISA) and microcystin genes (mcyE). The estimated risk levels differed substantially between methods, with 78 % and 56 % of alert level exceedances in the total number of collected samples for fluorometry and microscopy-based methods, respectively, while this was only 16 % and 6 % when the risk assessment was based on ELISA and LC-MS/MS obtained toxin concentrations, respectively. Integrating our results with earlier findings confirmed a strong association between microcystin concentration and the biovolume of potential microcystin-producing genera. Moreover, using an extended database consisting of 4265 observations from 461 locations across the Netherlands in the bathing water seasons of 2015 - 2019, we showed a strong association between fluorescence and the biovolume of potentially toxin-producing genera. Our results indicate that a two-tiered approach may be an effective risk assessment strategy, with first a biomass-based method (fluorometry, biovolume) until the first alert level is exceeded, after which the risk level can be confirmed or adjusted based on follow-up toxin or toxin gene analyses.


Assuntos
Cianobactérias , Monitoramento Ambiental , Proliferação Nociva de Algas , Lagos , Microcistinas , Medição de Risco , Monitoramento Ambiental/métodos , Microcistinas/análise , Lagos/microbiologia , Lagos/química , Países Baixos , Espectrometria de Massas em Tandem/métodos , Cromatografia Líquida , Ensaio de Imunoadsorção Enzimática
6.
Science ; 385(6713): 1105-1111, 2024 Sep 06.
Artigo em Inglês | MEDLINE | ID: mdl-39236161

RESUMO

Photoperiodic time measurement is the ability of plants and animals to measure differences in day versus night length (photoperiod) and use that information to anticipate critical seasonal transformations, such as annual temperature cycles. This timekeeping phenomenon triggers adaptive responses in higher organisms, such as gonadal stimulation, flowering, and hibernation. Unexpectedly, we observed this capability in cyanobacteria-unicellular prokaryotes with generation times as short as 5 to 6 hours. Cyanobacteria exposed to short, winter-like days developed enhanced resistance to cold mediated by desaturation of membrane lipids and differential programs of gene transcription, including stress response pathways. As in eukaryotes, this photoperiodic timekeeping required an intact circadian clockwork and developed over multiple cycles of photoperiod. Therefore, photoperiodic timekeeping evolved in much simpler organisms than previously appreciated and enabled genetic responses to stresses that recur seasonally.


Assuntos
Temperatura Baixa , Cianobactérias , Fotoperíodo , Estações do Ano , Relógios Circadianos , Cianobactérias/fisiologia , Cianobactérias/genética , Cianobactérias/metabolismo , Regulação Bacteriana da Expressão Gênica , Synechococcus/fisiologia , Synechococcus/genética , Transcrição Gênica
7.
Environ Monit Assess ; 196(10): 909, 2024 Sep 09.
Artigo em Inglês | MEDLINE | ID: mdl-39249606

RESUMO

Currently, more and more lakes around the world are experiencing outbreaks of cyanobacterial blooms, and high-precision and rapid monitoring of the spatial distribution of algae in water bodies is an important task. Remote sensing technology is one of the effective means for monitoring algae in water bodies. Studies have shown that the Floating Algae Index (FAI) is superior to methods such as the Standardized Differential Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI) in monitoring cyanobacterial blooms. However, compared to the NDVI method, the FAI method has difficulty in determining the threshold, and how to choose the threshold with the highest classification accuracy is challenging. In this study, FAI linear fitting model (FAI-L) is selected to solve the problem that FAI threshold is difficult to determine. Innovatively combine FAI index and NDVI index, and use NDVI index to find the threshold of FAI index. In order to analyze the applicability of FAI-L to extract cyanobacterial blooms, this paper selected multi-temporal Landsat8, HJ-1B, and Sentinel-2 remote sensing images as data sources, and took Chaohu Lake and Taihu Lake in China as research areas to extract cyanobacterial blooms. The results show that (1) the accuracy of extracting cyanobacterial bloom by FAI-L method is generally higher than that by NDVI and FAI. Under different data sources and different research areas, the average accuracy of extracting cyanobacterial blooms by FAI-L method is 95.13%, which is 6.98% and 18.43% higher than that by NDVI and FAI respectively. (2) The average accuracy of FAI-L method for extracting cyanobacterial blooms varies from 84.09 to 99.03%, with a standard deviation of 4.04, which is highly stable and applicable. (3) For simultaneous multi-source image data, the FAI-L method has the highest average accuracy in extracting cyanobacterial blooms, at 95.93%, which is 6.77% and 13.26% higher than NDVI and FAI methods, respectively. In this paper, it is found that FAI-L method shows high accuracy and stability in extracting cyanobacterial blooms, and it can extract the spatial distribution of cyanobacterial blooms well, which can provide a new method for monitoring cyanobacterial blooms.


Assuntos
Cianobactérias , Monitoramento Ambiental , Eutrofização , Lagos , Tecnologia de Sensoriamento Remoto , Cianobactérias/crescimento & desenvolvimento , Monitoramento Ambiental/métodos , Lagos/microbiologia , China , Modelos Lineares
8.
Enzymes ; 55: 121-142, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39222989

RESUMO

Recent research has identified a novel class of carbonic anhydrases (CAs), designated ι-CA, predominantly found in marine diatoms, eukaryotic algae, cyanobacteria, bacteria, and archaea genomes. This class has garnered attention owing to its unique biochemical properties and evolutionary significance. Through bioinformatic analyses, LCIP63, a protein initially annotated with an unknown function, was identified as a potential ι-CA in the marine diatom Thalassiosira pseudonana. Subsequent biochemical characterization revealed that LCIP63 has CA activity and its preference for manganese ions over zinc, indicative of evolutionary adaptation to marine environments. Further exploration of bacterial ι-CAs, exemplified by Burkholderia territorii ι-CA (BteCAι), demonstrated catalytic efficiency and sensitivity to sulfonamide and inorganic anion inhibitors, the classical CA inhibitors (CAIs). The classification of ι-CAs into two variant types based on their sequences, distinguished by the COG4875 and COG4337 domains, marks a significant advancement in our understanding of these enzymes. Structural analyses of COG4337 ι-CAs from eukaryotic microalgae and cyanobacteria thereafter revealed a distinctive structural arrangement and a novel catalytic mechanism involving specific residues facilitating CO2 hydration in the absence of metal ion cofactors, deviating from canonical CA behavior. These findings underscore the biochemical diversity within the ι-CA class and highlight its potential as a target for novel antimicrobial agents. Overall, the elucidation of ι-CA properties and mechanisms advances our knowledge of carbon metabolism in diverse organisms and underscores the complexity of CA evolution and function.


Assuntos
Anidrases Carbônicas , Anidrases Carbônicas/metabolismo , Proteínas de Bactérias/metabolismo , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Bactérias/efeitos dos fármacos , Burkholderia , Diatomáceas , Cianobactérias , Inibidores da Anidrase Carbônica/farmacologia , Inibidores da Anidrase Carbônica/química
9.
Toxicon ; 249: 108059, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-39117156

RESUMO

The aim of our study was to investigate the effects of cyanobacterial metabolites: microcystin-LR (MC-LR) anabaenopeptin-A (ANA-A), cylindrospermopsin (CYL), their binary and ternary mixtures on rainbow trout (Oncorhynchus mykiss) gill (RTgill-W1) cell line. We determined the following cell parameters: Hoechst and propidium iodide (PI) double staining, intracellular ATP level with luminometric assay, glutathione level with ThiolTracker Violet®- glutathione detection reagent and cytoskeletal F-actin fluorescence. The results showed that although reduction of Hoechst fluorescence was observed in both binary and ternary combinations of cyanobacterial metabolites, the mixture of MC-LR + ANA-A + CYL was the most potent inhibitor (EC50 = 148 nM). PI fluorescence and ATP levels were more increased in the cells exposed to the mixtures than those exposed to the individual metabolites with synergistic toxic changes suggesting apoptosis as the mechanism of cell death. Reduced glutathione level was also decreased in cells exposed both to single metabolites and their mixtures with the highest decrease and synergistic effects at 334 nM MC-LR+334 nM ANA-A+ 334 nM CYL suggesting induction oxidative stress by the tested compounds. Reduction of F-actin fluorescence was found in the cells from all of the groups exposed to individual metabolites and their mixtures, however the highest level of inhibition showed the binary MC-LR + CYL and the ternary MC-LR + ANA-A + CYL with synergistic interactions. The study suggests that in natural conditions fish gill cells may be very sensitive to individual cyanobacterial metabolites and more prone to their binary and ternary mixtures.


Assuntos
Alcaloides , Toxinas de Cianobactérias , Cianobactérias , Toxinas Marinhas , Microcistinas , Oncorhynchus mykiss , Uracila , Microcistinas/metabolismo , Animais , Alcaloides/farmacologia , Uracila/análogos & derivados , Linhagem Celular , Cianobactérias/metabolismo , Oncorhynchus mykiss/metabolismo , Brânquias/metabolismo , Brânquias/efeitos dos fármacos , Glutationa/metabolismo , Toxinas Bacterianas , Trifosfato de Adenosina/metabolismo , Apoptose/efeitos dos fármacos , Peptídeos Cíclicos/farmacologia
10.
Bioresour Technol ; 411: 131209, 2024 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-39181513

RESUMO

The investigation aimed to augment carbohydrate accumulation in the marine cyanobacterium Leptolyngbya valderiana BDU 41001 to facilitate bioethanol production. Under the standardised physiochemical condition (SPC), i.e. 90 µmol photon m-2 s-1 light intensity, initial culture pH 8.5, 35 °C temperature and mixing at 150 rpm increased the carbohydrate productivity ∼70 % than the control, while a 47 % rise in content was obtained under the nitrate (N)-starved condition. Therefore, a two-stage cultivation strategy was implemented, combining SPC at the 1st stage and N starvation at the 2nd stage, resulting in 80 % augmentation of carbohydrate yield, which enhanced the bioethanol yield by ∼86 % as compared to the control employing immobilised yeast fermentation. Moreover, biomass utilisation was maximised by extracting C-phycocyanin, where a ∼77 % rise in productivity was recorded under the SPC. This study highlights the potential of L. valderiana for pilot-scale biorefinery applications, advancing the understanding of sustainable biofuel production.


Assuntos
Biocombustíveis , Cianobactérias , Etanol , Ficocianina , Cianobactérias/metabolismo , Cianobactérias/crescimento & desenvolvimento , Etanol/metabolismo , Ficocianina/metabolismo , Fermentação , Biomassa , Metabolismo dos Carboidratos , Nitratos/metabolismo
11.
Sci Total Environ ; 951: 175418, 2024 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-39127195

RESUMO

Cyanobacteria proliferate in warm, nutrient-rich environments and release toxic secondary metabolites into natural waters. Using cyanotoxin-contaminated water to irrigate crops could expose humans and biota, but the risk may be low if agricultural soils can sorb and retain cyanotoxins. In this report, we compared the sorption and desorption capacities of multi-class cyanotoxins/anabaenopeptins in soils of variable properties with a batch sorption procedure. The target compounds were anabaenopeptin-A, anabaenopeptin-B, anatoxin-a, cylindrospermopsin, and microcystins -LR, -RR, -LA, -LY, -LW, and -LF. Based on solid-liquid distribution coefficients (Kd), we classified cylindrospermopsin and microcystin-LA/-LY as "very low sorptivity", anabaenopeptin-A, -B and microcystin-LR, -LF, and -LW as "low sorptivity", and anatoxin-a and microcystin-RR as "medium sorptivity". We remain concerned about irrigating agricultural land with water contaminated with high levels of CYN and MC-LA/-LY because of their relatively low affinity and high desorption proportion in soils. The results also suggest that soil sorption can be an effective immobilization pathway for anatoxin-a and microcystin-RR. The generated data will be useful for prioritizing research on the most bioavailable cyanotoxins/anabaenopeptins that are likely to be released by the soil matrix, for environmental risk assessment.


Assuntos
Alcaloides , Toxinas Bacterianas , Toxinas de Cianobactérias , Microcistinas , Poluentes do Solo , Solo , Tropanos , Uracila , Microcistinas/análise , Tropanos/análise , Alcaloides/análise , Toxinas Bacterianas/análise , Solo/química , Poluentes do Solo/análise , Uracila/análogos & derivados , Uracila/análise , Toxinas Marinhas/análise , Cianobactérias , Monitoramento Ambiental
12.
FEMS Microbiol Ecol ; 100(9)2024 Aug 13.
Artigo em Inglês | MEDLINE | ID: mdl-39138059

RESUMO

The factors shaping host-parasite interactions and epibiont communities in the variable rocky intertidal zone are poorly understood. California mussels, Mytilus californianus, are colonized by endolithic cyanobacterial parasites that erode the host shell. These cyanobacteria become mutualistic under certain abiotic conditions because shell erosion can protect mussels from thermal stress. How parasitic shell erosion affects or is affected by epibiotic microbial communities on mussel shells and the context dependency of these interactions is unknown. We used transplant experiments to characterize assemblages of epibiotic bacteria and endolithic parasites on mussel shells across intertidal elevation gradients. We hypothesized that living mussels, and associated epibacterial communities, could limit colonization and erosion by endolithic cyanobacteria compared with empty mussel shells. We hypothesized that shell erosion would be associated with compositional shifts in the epibacterial community and tidal elevation. We found that living mussels experienced less shell erosion than empty shells, demonstrating potential biotic regulation of endolithic parasites. Increased shell erosion was not associated with a distinct epibacterial community and was decoupled from the relative abundance of putatively endolithic taxa. Our findings suggest that epibacterial community structure is not directly impacted by the dynamic symbiosis between endolithic cyanobacteria and mussels throughout the rocky intertidal zone.


Assuntos
Cianobactérias , Simbiose , Animais , Cianobactérias/genética , Interações Hospedeiro-Parasita , Mytilus/microbiologia , Exoesqueleto/microbiologia , Microbiota , Bactérias/genética , Bactérias/classificação , Bactérias/isolamento & purificação
13.
Microbiome ; 12(1): 150, 2024 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-39127705

RESUMO

BACKGROUND: Picocyanobacteria from the genera Prochlorococcus, Synechococcus, and Cyanobium are the most widespread photosynthetic organisms in aquatic ecosystems. However, their freshwater populations remain poorly explored, due to uneven and insufficient sampling across diverse inland waterbodies. RESULTS: In this study, we present 170 high-quality genomes of freshwater picocyanobacteria from non-axenic cultures collected across Central Europe. In addition, we recovered 33 genomes of their potential symbiotic partners affiliated with four genera, Pseudomonas, Mesorhizobium, Acidovorax, and Hydrogenophaga. The genomic basis of symbiotic interactions involved heterotrophs benefiting from picocyanobacteria-derived nutrients while providing detoxification of ROS. The global abundance patterns of picocyanobacteria revealed ecologically significant ecotypes, associated with trophic status, temperature, and pH as key environmental factors. The adaptation of picocyanobacteria in (hyper-)eutrophic waterbodies could be attributed to their colonial lifestyles and CRISPR-Cas systems. The prevailing CRISPR-Cas subtypes in picocyanobacteria were I-G and I-E, which appear to have been acquired through horizontal gene transfer from other bacterial phyla. CONCLUSIONS: Our findings provide novel insights into the population diversity, ecology, and evolutionary strategies of the most widespread photoautotrophs within freshwater ecosystems. Video Abstract.


Assuntos
Cianobactérias , Água Doce , Genoma Bacteriano , Filogenia , Simbiose , Água Doce/microbiologia , Cianobactérias/genética , Cianobactérias/classificação , Adaptação Fisiológica/genética , Europa (Continente) , Ecossistema , Transferência Genética Horizontal , Genômica
14.
Environ Microbiol ; 26(8): e16682, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-39128858

RESUMO

The freshwater microbiome harbours numerous copiotrophic bacteria that rapidly respond to elevated substrate concentrations. We hypothesized that their high centimetre-scale beta diversity in lake water translates into pronounced metabolic variability, and that a large fraction of microbial 'metabolic potential' originates from point sources such as fragile organic aggregates. Three experiments were conducted in pre-alpine Lake Zurich over the course of a harmful cyanobacterial bloom: Spatially explicit 9 ml 'syringe' samples were collected in situ at centimetre distances along with equally sized 'mixed' samples drawn from pre-homogenized lake water and incubated in BIOLOG EcoPlate substrate arrays. Fewer compounds promoted bacterial growth in the syringe than in the mixed samples, in particular during the pre- and late bloom periods. Community analysis of enrichments on three frequently utilized substrates revealed both pronounced heterogeneity and functional redundancy. Bacterial consortia had higher richness in mixed than in syringe samples and differed in composition. Members of the Enterobacter cloacae complex dominated the EcoPlate assemblages during the mid-bloom period irrespective of treatment or substrate. We conclude that small-scale functional dispersal limitation among free-living copiotrophs in lake water reduces local biotransformation potential, and that lacustrine blooms of harmful cyanobacteria can be environmental reservoirs for metabolically versatile potential pathogens.


Assuntos
Cianobactérias , Água Doce , Lagos , Microbiota , Lagos/microbiologia , Cianobactérias/metabolismo , Cianobactérias/crescimento & desenvolvimento , Água Doce/microbiologia , Bactérias/classificação , Bactérias/metabolismo , Bactérias/genética , Suíça , Consórcios Microbianos/fisiologia
15.
Molecules ; 29(15)2024 Jul 25.
Artigo em Inglês | MEDLINE | ID: mdl-39124891

RESUMO

Desert strains of the genus Chroococcidiopsis are among the most desiccation-resistant cyanobacteria capable of anhydrobiosis. The accumulation of two sugars, sucrose and trehalose, facilitates the entrance of anhydrobiotes into a reversible state of dormancy by stabilizing cellular components upon water removal. This study aimed to evaluate, at the atomistic level, the role of trehalose in desiccation resistance by using as a model system the 30S ribosomal subunit of the desert cyanobacterium Chroococcidiopsis sp. 029. Molecular dynamic simulations provided atomistic evidence regarding its protective role on the 30S molecular structure. Trehalose forms an enveloping shell around the ribosomal subunit and stabilizes the structures through a network of direct interactions. The simulation confirmed that trehalose actively interacts with the 30S ribosomal subunit and that, by replacing water molecules, it ensures ribosomal structural integrity during desiccation, thus enabling protein synthesis to be carried out upon rehydration.


Assuntos
Cianobactérias , Simulação de Dinâmica Molecular , Trealose , Trealose/metabolismo , Trealose/química , Cianobactérias/metabolismo , Cianobactérias/química , Subunidades Ribossômicas Menores de Bactérias/metabolismo , Subunidades Ribossômicas Menores de Bactérias/química , Dessecação , Modelos Moleculares
16.
Int J Mol Sci ; 25(15)2024 Jul 26.
Artigo em Inglês | MEDLINE | ID: mdl-39125759

RESUMO

Photosystem I (PSI) serves as a model system for studying fundamental processes such as electron transfer (ET) and energy conversion, which are not only central to photosynthesis but also have broader implications for bioenergy production and biomimetic device design. In this study, we employed electron paramagnetic resonance (EPR) spectroscopy to investigate key light-induced charge separation steps in PSI isolated from several green algal and cyanobacterial species. Following photoexcitation, rapid sequential ET occurs through either of two quasi-symmetric branches of donor/acceptor cofactors embedded within the protein core, termed the A and B branches. Using high-frequency (130 GHz) time-resolved EPR (TR-EPR) and deuteration techniques to enhance spectral resolution, we observed that at low temperatures prokaryotic PSI exhibits reversible ET in the A branch and irreversible ET in the B branch, while PSI from eukaryotic counterparts displays either reversible ET in both branches or exclusively in the B branch. Furthermore, we observed a notable correlation between low-temperature charge separation to the terminal [4Fe-4S] clusters of PSI, termed FA and FB, as reflected in the measured FA/FB ratio. These findings enhance our understanding of the mechanistic diversity of PSI's ET across different species and underscore the importance of experimental design in resolving these differences. Though further research is necessary to elucidate the underlying mechanisms and the evolutionary significance of these variations in PSI charge separation, this study sets the stage for future investigations into the complex interplay between protein structure, ET pathways, and the environmental adaptations of photosynthetic organisms.


Assuntos
Luz , Complexo de Proteína do Fotossistema I , Complexo de Proteína do Fotossistema I/metabolismo , Complexo de Proteína do Fotossistema I/química , Espectroscopia de Ressonância de Spin Eletrônica/métodos , Transporte de Elétrons , Cianobactérias/metabolismo , Fotossíntese , Clorófitas/metabolismo
17.
Nat Commun ; 15(1): 6758, 2024 Aug 08.
Artigo em Inglês | MEDLINE | ID: mdl-39117643

RESUMO

Cyanobacteria are a diverse group of prokaryotic organisms that have been the subject of intense basic research, resulting in a wealth of knowledge about fundamental cellular processes such as photosynthesis. However, the translation of that research towards industry-relevant applications is still limited. To understand the reasons for this contradictory situation, we conducted a quantitative survey among researchers in the cyanobacterial community, a set of individual interviews with established researchers, and a literature analysis. Our results show that the community seems to be committed to embracing cyanobacterial diversity and promoting collaboration. Additionally, participants expressed a strong desire to develop standardized protocols for research and establish larger consortia to accelerate progress. The results of the survey highlight the need for a more integrated approach to cyanobacterial research that encompasses both basic and applied aspects. Based on the survey and interview results as well as our literature analysis, we highlight areas for potential improvement, strategies to enhance cyanobacterial research, and open questions that demand further exploration. Addressing these challenges should accelerate the development of industrial applications based on cyanobacterial research.


Assuntos
Cianobactérias , Inquéritos e Questionários , Pesquisa , Humanos , Fotossíntese , Pesquisadores
18.
Geobiology ; 22(4): e12615, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39149974

RESUMO

The earliest evidence of complex macroscopic life on Earth is preserved in Ediacaran-aged siliciclastic deposits as three-dimensional casts and molds, known as Ediacara-style preservation. The mechanisms that led to this extraordinary preservation of soft-bodied organisms in fine- to medium-grained sandstones have been extensively debated. Ediacara-style fossilization is recorded in a variety of sedimentary facies characterized by clean quartzose sandstones (as in the eponymous Ediacara Member) as well as less compositionally mature, clay-rich sandstones and heterolithic siliciclastic deposits. To investigate this preservational process, we conducted experiments using different mineral substrates (quartzose sand, kaolinite, and iron oxides), a variety of soft-bodied organisms (microalgae, cyanobacteria, marine invertebrates), and a range of estimates for Ediacaran seawater dissolved silica (DSi) levels (0.5-2.0 mM). These experiments collectively yielded extensive amorphous silica and authigenic clay coatings on the surfaces of organisms and in intergranular pore spaces surrounding organic substrates. This was accompanied by a progressive drawdown of the DSi concentration of the experimental solutions. These results provide evidence that soft tissues can be rapidly preserved by silicate minerals precipitated under variable substrate compositions and a wide range of predicted scenarios for Ediacaran seawater DSi concentrations. These observations suggest plausible mechanisms explaining how interactions between sediments, organic substrates, and seawater DSi played a significant role in the fossilization of the first complex ecosystems on Earth.


Assuntos
Cianobactérias , Fósseis , Sedimentos Geológicos , Sedimentos Geológicos/química , Animais , Cianobactérias/metabolismo , Invertebrados , Microalgas , Água do Mar/química , Dióxido de Silício/química , Compostos Férricos/metabolismo
19.
Mar Pollut Bull ; 206: 116781, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-39096867

RESUMO

Effective management of Harmful Algal Blooms (HABs) requires understanding factors influencing their occurrence. This study explores these dynamics in the Pengxi River, a tributary of the Three Gorges Reservoir, focusing on nutrient stratification and algal blooms. We hypothesized that nutrient levels in eutrophic waters with stable stratification correlate with HAB magnitude and that disruption of stratification triggers blooms due to nutrient shifts. A 38-day sampling campaign in Gaoyang Lake (April 16-May 23, 2022) revealed that consistent weather between April 26 and May 16 led to a surface density layer, restricting nutrient transfer and causing a bloom with 173.0 µg L-1 Chl-a on May 1. After a heavy rain on May 18, a peak bloom on May 20, dominated by Ceratium hirundinella, showed 533 µg L-1 Chl-a. There was a significant negative correlation between Cyanobacteria and C. hirundinella biomasses (r = -0.296, P < 0.01), highlighting nutrient availability and physical stability's roles in regulating HABs.


Assuntos
Cianobactérias , Monitoramento Ambiental , Proliferação Nociva de Algas , Lagos , Lagos/química , China , Rios/química , Biomassa , Eutrofização
20.
Commun Biol ; 7(1): 929, 2024 Aug 02.
Artigo em Inglês | MEDLINE | ID: mdl-39095605

RESUMO

Mesoscale eddies influence the distribution of diazotrophic (nitrogen-fixing) cyanobacteria, impacting marine productivity and carbon export. Non-cyanobacterial diazotrophs (NCDs) are emerging as potential contributors to marine nitrogen fixation, relying on organic matter particles for resources, impacting nitrogen and carbon cycling. However, their diversity and biogeochemical importance remain poorly understood. In the subtropical North Atlantic along a single transect, this study explored the horizontal and vertical spatial variability of NCDs associated with suspended, slow-sinking, and fast-sinking particles collected with a marine snow catcher. The investigation combined amplicon sequencing with hydrographic and biogeochemical data. Cyanobacterial diazotrophs and NCDs were equally abundant, and their diversity was explained by the structure of the eddy. The unicellular symbiotic cyanobacterium UCYN-A was widespread across the eddy, whereas Trichodesmium and Crocosphaera accumulated at outer fronts. The diversity of particle-associated NCDs varied more horizontally than vertically. NCDs constituted most reads in the fast-sinking fractions, mainly comprising Alphaproteobacteria, whose abundance significantly differed from the suspended and slow-sinking fractions. Horizontally, Gammaproteobacteria and Betaproteobacteria exhibited inverse distributions, influenced by physicochemical characteristics of water intrusions at the eddy periphery. Niche differentiations across the anticyclonic eddy underscored NCD-particle associations and mesoscale dynamics, deepening our understanding of their ecological role and impact on ocean biogeochemistry.


Assuntos
Cianobactérias , Fixação de Nitrogênio , Oceano Atlântico , Cianobactérias/genética , Cianobactérias/metabolismo , Água do Mar/microbiologia
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