Validation of OMI-DOAS total ozone column amounts against ground-based measurements at an African equatorial belt site.

The total ozone column amount (TOCA) values from the Ozone Monitoring Instrument (OMI) derived from OMI/Aura ozone (O3) differential optical absorption spectroscopy (DOAS) V003 (OMDOAO3) have been validated against the ground-based TOCA values derived from Dobson and the Norwegian Institute for Air Research UV measurements in Kampala (0.31º N, 32.58º E, 1200 m), Uganda, for the period between 2005 and 2018. Under all-sky conditions, the OMI retrieval algorithm was found to underestimate the TOCA values with mean bias (MnB), root mean square error (RMSE), and correlation coefficient (r) values ranging from about -3.4% to -1.7%, 2.4% to 4.9%, and 0.73 to 0.90, respectively. When only days with a radiation modification factor greater than or equal to 65% were considered, the MnB, RMSE, and r values between TOCA values derived from ground-based and OMI measurements improved, and they ranged from -2.5% to -1.3%, 1.4% to 3.8%, and 0.8 to 0.91, respectively. A good agreement was found between TOCA values derived from Dobson measurements and those derived from OMI satellite measurements with MnB, RMSE, and r values of about -1.8%, 1.4%, and 0.91, respectively. This was due to the fact that Dobson measurements were taken only when the sky was perceived clear. The underestimation of TOCA values by the OMI retrieval algorithm was found to be due mainly to clouds and aerosols.

Ground-based measurements of total ozone column amount with a multichannel moderate-bandwidth filter instrument at the Troll research station, Antarctica.

Combining information from several channels of the Norwegian Institute for Air Research (NILU-UV) irradiance meter, one may determine the total ozone column (TOC) amount. A NILU-UV instrument has been deployed and operated on two locations at Troll research station in Jutulsessen, Queen Maud Land, Antarctica, for several years. The method used to determine the TOC amount is presented, and the derived TOC values are compared with those obtained from the Ozone Monitoring Instrument (OMI) located on NASA's AURA satellite. The findings show that the NILU-UV TOC amounts correlate well with the results of the OMI and that the NILU-UV instruments are suitable for monitoring the long-term change and development of the ozone hole. Because of the large footprint of OMI, NILU-UV is a more suitable instrument for local measurements.

Aerosol optical properties in Northern Norway and Svalbard.

We present comparisons between estimates of the aerosol optical thickness and the Ångström exponent in Northern Norway and Svalbard based on data from AERONET (Aerosol Robotic Network) stations at Andenes (69.28°N, 16.01°E, 379 m altitude) and Hornsund (77.00°N, 15.56°E, 10 m altitude) for the period 2008-2013. The five/six-year annual mean values for the aerosol optical thickness at 500 nm τ(500) at Andenes and Hornsund both were 0.09. At Hornsund, there was less variation of the monthly mean value of τ(500) than at Andenes. The annual mean values of the Ångström exponent α at Andenes and Hornsund were 1.29 and 1.34, respectively. At Andenes and Hornsund α was found to be larger than 1.1 in 68% and 84% of the observations, respectively, indicating that fine-mode particles were dominating at both sites. Both sites had a similar aerosol size distribution during summer although one site is in an arctic area while the other site is in a subarctic area.

Validation of ozone monitoring instrument ultraviolet index against ground-based UV index in Kampala, Uganda.

The Ozone Monitoring Instrument (OMI) overpass solar ultraviolet (UV) indices have been validated against the ground-based UV indices derived from Norwegian Institute for Air Research UV measurements in Kampala (0.31° N, 32.58° E, 1200 m), Uganda for the period between 2005 and 2014. An excessive use of old cars, which would imply a high loading of absorbing aerosols, could cause the OMI retrieval algorithm to overestimate the surface UV irradiances. The UV index values were found to follow a seasonal pattern with maximum values in March and October. Under all-sky conditions, the OMI retrieval algorithm was found to overestimate the UV index values with a mean bias of about 28%. When only days with radiation modification factor greater than or equal to 65%, 70%, 75%, and 80% were considered, the mean bias between ground-based and OMI overpass UV index values was reduced to 8%, 5%, 3%, and 1%, respectively. The overestimation of the UV index by the OMI retrieval algorithm was found to be mainly due to clouds and aerosols.

Aerosol optical properties and precipitable water vapor column in the atmosphere of Norway.

Between February 2012 and April 2014, we measured and analyzed direct solar radiances at a ground-based station in Bergen, Norway. We discovered that the spectral aerosol optical thickness (AOT) and precipitable water vapor column (PWVC) retrieved from these measurements have a seasonal variation with highest values in summer and lowest values in winter. The highest value of the monthly median AOT at 440 nm of about 0.16 was measured in July and the lowest of about 0.04 was measured in December. The highest value of the monthly median PWVC of about 2.0 cm was measured in July and the lowest of about 0.4 cm was measured in December. We derived Ångström exponents that were used to deduce aerosol particle size distributions. We found that coarse-mode aerosol particles dominated most of the time during the measurement period, but fine-mode aerosol particles dominated during the winter seasons. The derived Ångström exponent values suggested that aerosols containing sea salt could have been dominating at this station during the measurement period.

New neural-network-based method to infer total ozone column amounts and cloud effects from multi-channel, moderate bandwidth filter instruments.

A new method is presented based on a radial basis function neural network (RBF-NN) to analyze data obtained by ultraviolet (UV) irradiance instruments. Application of the RBF-NN method to about three years of data obtained by a NILU-UV device, which is a multi-channel, moderate bandwidth filter instrument, revealed that compared to the traditional Look-up table (LUT) method, the RBF-NN method yielded better agreement with a 1% decrease in relative difference and an increase of 0.03 in correlation with total ozone column (TOC) values obtained from the Ozone Monitoring Instrument (OMI). Furthermore, the RBF-NN method retrieved more valid results (daily average values within a meaningful range (200-500 DU)) than the LUT method. Compared with RBF-NN retrievals, TOC values obtained from the OMI are underestimated under cloudy conditions. This finding agrees with conclusions reached by Anton and Loyola (2011).

Aerosols in coastal and inland areas in the equatorial African belt.

Aerosols affect the climate directly through absorption and reflection of sunlight back to space and indirectly by acting as cloud condensation nuclei. This paper is based on more than three decades of satellite data (1979-1994 and 1996-2012) from total ozone mapping spectrometer (TOMS) and ozone monitoring instrument (OMI), which have provided measurements of backscattered radiances in the wavelength range from 331 to 380 nm. These data have been used to determine the aerosol climatology and to investigate the influence of the aerosol index (AI) on the ultraviolet index (UVI) in coastal land areas in Serrekunda (13.28°N, 16.34°W), The Gambia, and Dar-es-Salaam (6.8°S, 39.26°E), Tanzania, as well as in inland areas in Kampala (0.19°N, 32.34°E), Uganda. Heavy aerosol loadings were found to occur in the dry seasons at all three locations. To reduce the influence of clouds, we disregarded TOMS and OMI data for days during which the UV reflectivity was larger than 9% and investigated the correlation of the AI with the UVI for the remaining days at the three locations. We found a high correlation coefficient of 0.82 for Serrekunda, but poor correlation for Kampala and Dar-es-Salaam. The average AI for Serrekunda was found to be about three times higher than that for Kampala or Dar-es-Salaam, and a positive trend was found for the AI in Kampala and Dar-es-Salaam, whereas a negative trend was found for the AI in Serrekunda.

Comparison of ground-based measurements of solar UV radiation at four sites on the Tibetan Plateau.

We compare results for the UV index (UVI), the total ozone column (TOC), and the radiation modification factor (RMF, being 1 in the absence of clouds and aerosols) at four sites on the Tibetan Plateau. The results were obtained by analyzing ground measurements by multichannel moderate-bandwidth filter instruments for the period July 2008-September 2010, and radiative transfer modeling was used to aid the interpretation of the results. The highest UVI of 20.6 was measured in Tingri (28.7°N; 4335 m). For July, monthly mean UVI values were 14.5 and 12.9 in Tingri and Lhasa (29.7°N; 3683 m), respectively. Generally, the UVI levels in Tingri and Lhasa were higher than in Nagchu (31.5°N; 4510 m) and Linzhi (29.7°N; 2995 m), due to less cloud cover at the former two sites. In 2009, the annual mean UVI and RMF values were 6.8 and 0.7 for Linzhi, 8.8 and 0.92 for Lhasa, 10.5 and 0.92 for Tingri, and 6.7 and 0.7 for Nagchu. Radiative transfer simulations indicate that the latitude difference would correspond to an increase in the UVI of about 0.3 from Nagchu to Tingri; whereas, the altitude difference would correspond to a reduction of about 1.5%, implying that the observed difference is due to the difference in cloud cover. The annual mean TOC values were found to be 260-264 Dobson units (DU) in Lhasa, Linzhi, and Nagchu, and 252 DU in Tingri. TOC values in Lhasa were found to agree within 3% with those derived from Ozone Monitoring Instrument (OMI) measurements.

The Beynon Gabor zone plate: a new tool for de Broglie matter waves and hard X-rays? An off axis and focus intensity investigation.

Optical elements based on Fresnel zones are used in a range of applications, from X-ray telescopy to microscopy and recently also in the manipulation of de Broglie matter waves. In 1992 Beynon and co-workers presented a binary Gabor type zone plate (henceforth referred to as the Beynon Gabor zone plate). Because this zone plate has no higher order foci, it is in principle a very attractive candidate for focusing of de Broglie matter waves and in some cases X-rays. So far the Beynon Gabor zone plate investigations presented in the literature have concentrated on the intensity distribution along the optical axis and in the focal plane. Here we present a detailed numerical investigation of the Beynon Gabor zone plate, including an investigation of the off-optical axis, off focal plane intensity distribution for point source illumination. We show that at integer fractions of the focal length, the beam becomes nearly toroidal (doughnut-shaped). This offers potentially interesting new possibilities for de Broglie matter wave and X-ray optics, for example in STED-like applications. We further show that the increased intensity at the focal point predicted in the literature for a particular Beynon Gabor zone plate transmission function configuration is an artifact due to the lack of sampling nodes. We support our calculations with experimental measurements in the visible light range, using a Beynon Gabor zone plate fabricated with electron beam lithography.

Stokes scattering matrix for human skin.

We use a layered model of normal human skin based on size distributions of polydisperse spherical particles and their complex refractive indices to compute the Stokes scattering matrix at wavelengths in the visible spectral band. The elements of the Stokes scattering matrix are required in a polarized radiative transfer code for a coupled air-tissue system to compute the polarized reflectance and examine how it is dependent on the vertical structure of the inherent optical properties of skin, including the phase matrix. Thus, the elements of the Stokes scattering matrix can be useful for investigating polarization-dependent light propagation in turbid optical media, such as human skin tissue.

Chlorophyll a and NADPH fluorescence lifetimes in the microalgae Haematococcus pluvialis (Chlorophyceae) under normal and astaxanthin-accumulating conditions.

In vivo fluorescence lifetimes of chlorophyll-a (chl-a) and nicotinamide adenine dinucleotide phosphate (NADPH) were obtained from the green microalgae Haematococcus pluvialis under normal and nutrient-stressed conditions (green stage and red stage, respectively), using two-photon excitation provided by a laser generating pulses in the femtosecond range, and a Leica microscope setup. Analysis of the fluorescence lifetime decay curve revealed two separate lifetime components in all our measurements. A short-lifetime component for chl-a of ~250 ps was completely dominant, contributing more than 90% of overall intensity in both green-stage and red-stage cells. Green-stage cells inhibited by 3-(3,4-dichlorophenyl)-1,1-dimethyl-urea (DCMU) displayed a significant chl-a lifetime increase for the short component. However, this was not the case for red-stage cells, in which DCMU inhibition did not significantly affect the lifetime. For green-stage cells, we found a short NADPH (free) lifetime component at ~150 ps to be completely dominating, but for red-stage cells, a longer component (protein bound) at ~3 ns contributed as much as 35% of the total intensity. We hypothesize that the long lifetime component of NADPH is connected to photoprotection in the cells and coupled to production of astaxanthin. DCMU does not seem to affect the fluorescence lifetimes of NADPH.

Mueller matrix measurements and modeling pertaining to Spectralon white reflectance standards.

The full Mueller matrix for a Spectralon white reflectance standard was measured in the incidence plane, to obtain the polarization state of the scattered light for different angles of illumination. The experimental setup was a Mueller matrix ellipsometer, by which measurements were performed for scattering angles measured relative to the normal of the Spectralon surface from -90° to 90° sampled at every 2.5° for an illumination wavelength of 532 nm. Previously, the polarization of light scattered from Spectralon white reflectance standards was measured only for four of the elements of the Muller matrix. As in previous investigations, the reflection properties of the Spectralon white reflectance standard was found to be close to those of a Lambertian surface for small scattering and illumination angles. At large scattering and illumination angles, all elements of the Mueller matrix were found to deviate from those of a Lambertian surface. A simple empirical model with only two parameters, was developed, and used to simulate the measured results with fairly good accuracy.

Double refraction of a Gaussian beam into a uniaxial crystal.

For a linearly polarized three-dimensional Gaussian beam in air that is normally incident upon a plane interface with a uniaxial crystal with optic axis in an arbitrary direction, we present integral representations for the transmitted field suitable for asymptotic analysis and efficient numerical evaluation and derive analytical expressions for transmitted nontruncated Gaussian beams for the cases in which the incident beam is polarized parallel to the plane containing the optic axis and the interface normal and transverse to it. The general solution for an arbitrary polarization state of an incident Gaussian beam follows by superposition of these two solutions.

Mueller matrix measurements of algae with different shape and size distributions.

The full Mueller matrix was measured to obtain the polarization state of the scattered light for a variety of algae with different shapes, wall compositions, sizes, and refractive indices. The experimental setup was a multiple laser Mueller matrix ellipsometer, by which measurements were performed for scattering angles from 16° to 160° sampled at every second degree for wavelengths of 473 nm and 532 nm. Previously, the polarization of light scattered from microalgae was investigated only for a few species, and the Mueller matrix was found to have little variation between the species. In our work a total of 11 algal species were investigated, representing diatoms, dinoflagellates, coccolithophorids, green algae, and a cryptophyte. The selection of species was made to obtain high variability in shape, size, cell wall, and refractive index. As in previous investigations, very small variations were found between species for most of the Mueller matrix elements, but noticeable variations were found for M(11), (M(12)+M(21))/2 and (M(33)+M(44))/2.

Bidirectional reflectance distribution function of Spectralon white reflectance standard illuminated by incoherent unpolarized and plane-polarized light.

A Lambert surface would appear equally bright from all observation directions regardless of the illumination direction. However, the reflection from a randomly scattering object generally has directional variation, which can be described in terms of the bidirectional reflectance distribution function (BRDF). We measured the BRDF of a Spectralon white reflectance standard for incoherent illumination at 405 and 680 nm with unpolarized and plane-polarized light from different directions of incidence. Our measurements show deviations of the BRDF for the Spectralon white reflectance standard from that of a Lambertian reflector that depend both on the angle of incidence and the polarization states of the incident light and detected light. The non-Lambertian reflection characteristics were found to increase more toward the direction of specular reflection as the angle of incidence gets larger.

Optical transfer diagnosis of pigmented lesions.

BACKGROUND: Optical transfer diagnosis is a novel melanoma detection system that uses morphologic-physiologic mapping. OBJECTIVE: To further evaluate the potential of optical transfer diagnosis for distinguishing benign from malignant pigmented melanocytic neoplasms. METHODS AND MATERIALS: Ninety-four patients with pigmented lesions suggestive of melanoma were referred for optical transfer diagnosis. After lesions were scanned with the camera, they were removed for histopathologic examination by two dermatopathologists each. From the recorded images, morphologic-physiologic maps were created with prediction models of light absorption and scattering by chromophores such as hemoglobin, keratin, and melanin at different epidermal and dermal depths. Entropy and relative entropy values derived from the morphologic-physiologic maps and a set of pure morphologic parameters were analyzed for output prediction of melanoma versus nonmelanoma. Dermoscopic images were reviewed and scored using the color, architecture, symmetry, and homogeneity (CASH) algorithm to assign a value of clinical atypia. RESULTS Of the 118 scanned and biopsied lesions (median CASH score 8), 11 were identified as melanoma or atypical melanocytic hyperplasia consistent with melanoma. For identification of melanomas, optical transfer diagnosis had a sensitivity of 100% and a specificity of 90%. CONCLUSIONS: This technology continues to be a promising adjunct to clinical skin cancer screening.

Optical transfer diagnosis of pigmented lesions: a pilot study.

OBJECTIVE: To evaluate the potential of a novel imaging technology, optical transfer diagnosis (OTD), for differentiation of benign from malignant pigmented melanocytic lesions. DESIGN: Patients with pigmented lesions suspicious for melanoma were referred for OTD. After scanning, lesions were biopsied for histopathologic examination, each by two separate dermatopathologists. To create morphologic-physiologic maps, the imaging system used the morphologic and physiologic parameters derived from prediction models of light absorption and scattering by chromophores such as hemoglobin, keratin, and melanin at different epidermal and dermal depths. The relative entropies were analyzed for output prediction of malignancy vs. nonmalignancy. SETTING: General dermatology clinic in a tertiary care academic medical center. PATIENTS: Fifty patients with suspected melanoma. INTERVENTION: OTD of pigmented lesions suspicious for melanoma, followed by biopsies for histopathologic examination. MAIN OUTCOME MEASURES: Histopathologic confirmation of malignant lesions identified by OTD as melanoma. RESULTS: Sixty-three pigmented suspicious lesions were scanned before being biopsied for histopathologic examination by the two dermatopathologists. Of the 63 lesions, five were identified as melanoma and 58 were found to be benign (including three seborrheic keratoses and 55 melanocytic nevi). OTD was able to identify the malignant lesions with 100% sensitivity and 94.8-96.6% specificity. CONCLUSIONS: Further study is indicated, but this technology is a promising adjunct to clinical skin cancer screening. Additionally, if the physiologic prediction models can be validated, OTD may facilitate the noninvasive study of some aspects of cutaneous physiology.

Numerical and experimental results for focusing of three-dimensional electromagnetic waves into uniaxial crystals.

We present experimental results for focusing of a three-dimensional electromagnetic wave through a plane interface into two different uniaxial crystals, a positive MgF2 crystal and a negative LiNbO3 crystal. These results are compared with numerical results and good agreement is found, both for intensity distributions in various receiving planes and for the locations of the sagittal and tangential focal planes. The theory is briefly outlined both for the exact solution, which includes extraparaxial geometries and double refraction, and for the paraxial solution, in which double refraction is ignored.

Changes in human skin after topical PDT with hexyl aminolevulinate.

BACKGROUND: Photodynamic therapy (PDT) induces physiological changes in human skin, but details and kinetics are not known. METHODS: Changes in human skin induced by PDT with red light in the presence of topically applied cream with the hexyl aminolevulinate (HAL) were investigated in the skin of five healthy volunteers. In addition to testing the effects of HAL-PDT three control studies were performed on the volunteers: (A) the HAL containing cream was applied to the skin without light exposure; (B) the cream without HAL was applied to the skin; (C) the skin was exposed to light in the absence of the cream. Reflectance spectra of the skin were measured in the wavelength region 300-600 nm before and after treatment. An advanced and new inverse radiative transfer model was used to determine changes induced in a number of skin parameters. RESULTS: The main discoveries were that the dermal blood concentration increased immediately after PDT, reached a maximum after 1-2 days, and then decreased. The blood oxygenation increased significantly immediately after PDT and then decreased. After PDT the melanosome concentration in the upper epidermis increased steadily. No such changes were observed in the control sites. CONCLUSIONS: Our results imply that HAL-PDT leads to increased vascularisation, oxygenation and melanin formation.

Parameterization of the inherent optical properties of Murchison Bay, Lake Victoria.

Lake Victoria, Africa's largest freshwater lake, suffers greatly from negative changes in biomass of species of fish and also from severe eutrophication. The continuing deterioration of Lake Victoria's ecological functions has great long-term consequences for the ecosystem benefits it provides to the countries bordering its shores. However, knowledge about temporal and spatial variations of optical properties and how they relate to lake constituents is important for a number of reasons such as remote sensing, modeling of underwater light fields, and long-term monitoring of lake waters. Based on statistical analysis of data from optical measurements taken during half a year of weekly cruises in Murchison Bay, Lake Victoria, we present a three-component model for the absorption and a two-component model for the scattering of light in the UV and the visible regions of the solar spectrum along with tests of their ranges of validity. The three-component input to the model for absorption is the chlorophyll-a (Chl-a), total suspended materials concentrations, and yellow substance absorption, while the two-component input to the model for scattering is the Chl-a concentration and total suspended materials.