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1.
Semin Cell Dev Biol ; 89: 136-146, 2019 05.
Artigo em Inglês | MEDLINE | ID: mdl-30076963

RESUMO

An extracellular matrix (ECM) is a prerequisite for multicellular life. It is adapted to tissues and constantly undergoes changes to preserve microenvironmental homeostasis. The ECM acts as a structural scaffold that establishes tissue architecture and provides tensile strength. It has cell-instructive functions by serving as a reservoir and presenter of soluble agents, being directly signaling, integrating transmission of mechanical and biological cues, or serving as a co-factor potentiating signaling. The skin contains a highly developed, mechanically tough, but yet flexible ECM. The tissue-specific features of this ECM are largely attributed by minor ECM components. A large number of genetic and acquired ECM diseases with skin manifestations, provide an illustrative testament to the importance of correct assembly of the ECM for dermal homeostasis. Here, we will present the composition and features of the skin ECM during homeostasis and regeneration. We will discuss genetic and acquired ECM diseases affecting skin, and provide a short outlook to therapeutic strategies for them.


Assuntos
Microambiente Celular/genética , Matriz Extracelular/genética , Regeneração/genética , Pele/crescimento & desenvolvimento , Matriz Extracelular/química , Homeostase/genética , Humanos , Pele/química , Pele/patologia , Cicatrização/genética
2.
Proc Natl Acad Sci U S A ; 115(4): E705-E714, 2018 01 23.
Artigo em Inglês | MEDLINE | ID: mdl-29305555

RESUMO

Genetic loss of collagen VII causes recessive dystrophic epidermolysis bullosa (RDEB), a skin fragility disorder that, unexpectedly, manifests also with elevated colonization of commensal bacteria and frequent wound infections. Here, we describe an unprecedented systemic function of collagen VII as a member of a unique innate immune-supporting multiprotein complex in spleen and lymph nodes. In this complex, collagen VII specifically binds and sequesters the innate immune activator cochlin in the lumen of lymphoid conduits. In genetic mouse models, loss of collagen VII increased bacterial colonization by diminishing levels of circulating cochlin LCCL domain. Intraperitoneal injection of collagen VII, which restored cochlin in the spleen, but not in the skin, reactivated peripheral innate immune cells via cochlin and reduced bacterial skin colonization. Systemic administration of the cochlin LCCL domain was alone sufficient to diminish bacterial supercolonization of RDEB mouse skin. Human validation demonstrated that RDEB patients displayed lower levels of systemic cochlin LCCL domain with subsequently impaired macrophage response in infected wounds. This study identifies an intrinsic innate immune dysfunction in RDEB and uncovers a unique role of the lymphoid extracellular matrix in systemic defense against bacteria.


Assuntos
Colágeno Tipo VII/fisiologia , Epidermólise Bolhosa Distrófica/imunologia , Proteínas da Matriz Extracelular/metabolismo , Imunidade Inata , Tecido Linfoide/metabolismo , Animais , Modelos Animais de Doenças , Matriz Extracelular/imunologia , Humanos , Camundongos Knockout , Pele/microbiologia
3.
Expert Rev Proteomics ; 17(5): 377-391, 2020 05.
Artigo em Inglês | MEDLINE | ID: mdl-32552150

RESUMO

INTRODUCTION: The skin protects the human body from external insults and regulates water and temperature homeostasis. A highly developed extracellular matrix (ECM) supports the skin and instructs its cell functions. Reduced functionality of the ECM is often associated with skin diseases that cause physical impairment and also have implications on social interactions and quality of life of affected individuals. AREAS COVERED: With a focus on the skin ECM we discuss how mass spectrometry (MS)-based proteomic approaches first contributed to establishing skin protein inventories and then facilitated elucidation of molecular functions and disease mechanisms. EXPERT OPINION: MS-based proteomic approaches have significantly contributed to our understanding of skin pathophysiology, but also revealed the challenges in assessing the skin ECM. The numerous posttranslational modifications of ECM proteins, like glycosylation, crosslinking, oxidation, and proteolytic maturation in disease settings can be difficult to tackle and remain understudied. Increased ease of handling of LC-MS/MS systems and automated/streamlined data analysis pipelines together with the accompanying increased usage of LC-MS/MS approaches will ensure that in the coming years MS-based proteomic approaches will continue to play a vital part in skin disease research. They will facilitate the elucidation of molecular disease mechanisms and, ultimately, identification of new druggable targets.


Assuntos
Matriz Extracelular/genética , Proteômica , Dermatopatias/genética , Pele/metabolismo , Humanos , Oxirredução , Processamento de Proteína Pós-Traducional/genética , Proteólise , Pele/patologia , Dermatopatias/metabolismo , Dermatopatias/patologia , Espectrometria de Massas em Tandem
4.
Acta Derm Venereol ; 100(5): adv00053, 2020 02 12.
Artigo em Inglês | MEDLINE | ID: mdl-32039456

RESUMO

The term skin fragility disorders describes a group of conditions in which the structural integrity of the skin is compromised and its resistance to external shear forces diminished. Skin fragility can have different causes, ranging from genetic variations to inflammatory or physical phenomena. The genetic skin fragility disorders, collectively called epidermolysis bullosa, serve as a paradigm for the study of causes and mechanisms of skin fragility. Recent biomedical research has revealed substantial genetic heterogeneity of the epidermolysis bullosa group, delivered ample new knowledge on its pathophysiology, and facilitated the design of evidence-based therapeutic strategies. The therapy development process extends from in vitro testing to preclinical validation in animal models, and clinical trials. This article reviews different approaches to curative and symptom-relief therapies, and appraises their status and perspectives for clinical implementation.


Assuntos
Epidermólise Bolhosa/genética , Epidermólise Bolhosa/terapia , Predisposição Genética para Doença , Terapia Genética/métodos , Anormalidades da Pele/genética , Anormalidades da Pele/terapia , Terapia Baseada em Transplante de Células e Tecidos/métodos , Gerenciamento Clínico , Epidermólise Bolhosa/patologia , Medicina Baseada em Evidências , Feminino , Previsões , Alemanha , Humanos , Masculino , Índice de Gravidade de Doença , Anormalidades da Pele/patologia , Resultado do Tratamento
5.
Mol Cell Proteomics ; 17(4): 565-579, 2018 04.
Artigo em Inglês | MEDLINE | ID: mdl-29326176

RESUMO

The extracellular matrix protein collagen VII is part of the microenvironment of stratified epithelia and critical in organismal homeostasis. Mutations in the encoding gene COL7A1 lead to the skin disorder dystrophic epidermolysis bullosa (DEB), are linked to skin fragility and progressive inflammation-driven fibrosis that facilitates aggressive skin cancer. So far, these changes have been linked to mesenchymal alterations, the epithelial consequences of collagen VII loss remaining under-addressed. As epithelial dysfunction is a principal initiator of fibrosis, we performed a comprehensive transcriptome and proteome profiling of primary human keratinocytes from DEB and control subjects to generate global and detailed images of dysregulated epidermal molecular pathways linked to loss of collagen VII. These revealed downregulation of interaction partners of collagen VII on mRNA and protein level, but also increased abundance of S100 pro-inflammatory proteins in primary DEB keratinocytes. Increased TGF-ß signaling because of loss of collagen VII was associated with enhanced activity of lysosomal proteases in both keratinocytes and skin of collagen VII-deficient individuals. Thus, loss of a single structural protein, collagen VII, has extra- and intracellular consequences, resulting in inflammatory processes that enable tissue destabilization and promote keratinocyte-driven, progressive fibrosis.


Assuntos
Colágeno Tipo VII/genética , Queratinócitos/metabolismo , Lisossomos/metabolismo , Células Cultivadas , Colágeno Tipo VII/metabolismo , Homeostase , Humanos , Mutação , Proteoma , Transcriptoma
6.
Mol Ther ; 26(1): 17-30, 2018 01 03.
Artigo em Inglês | MEDLINE | ID: mdl-29055623

RESUMO

Squamous cell carcinoma (SCC) is one of the most common skin cancers and causes significant morbidity. Although the expression of the epithelial adhesion molecule collagen XVII (ColXVII) has been linked to SCC invasion, only little is known about its mechanistic contribution. Here, we demonstrate that ColXVII expression is essential for SCC cell proliferation and motility. Moreover, it revealed that particularly the post-translational modification of ColXVII by ectodomain shedding is the major driver of SCC progression, because ectodomain-selective immunostaining was mainly localized at the invasive front of human cutaneous SCCs, and exclusive expression of a non-sheddable ColXVII mutant in SCC-25 cells inhibits their matrix-independent growth and invasiveness. This cell surface proteolysis, which is strongly elevated during SCC invasion and metastasis, releases soluble ectodomains and membrane-anchored endodomains. Both released ColXVII domains play distinct roles in tumor progression: the endodomain induces proliferation and survival, whereas the ectodomain accelerates invasiveness. Furthermore, specific blockage of shedding by monoclonal ColXVII antibodies repressed matrix-independent growth and invasion of SCC cells in organotypic co-cultures. Thus, selective inhibition of ColXVII shedding may offer a promising therapeutic strategy to prevent SCC progression.


Assuntos
Autoantígenos/metabolismo , Carcinoma de Células Escamosas/metabolismo , Carcinoma de Células Escamosas/patologia , Membrana Celular/metabolismo , Colágenos não Fibrilares/metabolismo , Animais , Autoantígenos/química , Autoantígenos/genética , Biomarcadores , Carcinoma de Células Escamosas/genética , Linhagem Celular Tumoral , Proliferação de Células , Modelos Animais de Doenças , Progressão da Doença , Ectoderma/metabolismo , Expressão Gênica , Xenoenxertos , Humanos , Camundongos , Invasividade Neoplásica , Metástase Neoplásica , Estadiamento de Neoplasias , Colágenos não Fibrilares/química , Colágenos não Fibrilares/genética , Ligação Proteica , Proteólise , Neoplasias Cutâneas/metabolismo , Neoplasias Cutâneas/patologia , Colágeno Tipo XVII
8.
Hum Mol Genet ; 25(24): 5339-5352, 2016 12 15.
Artigo em Inglês | MEDLINE | ID: mdl-27798104

RESUMO

Kindler syndrome (KS), a rare, autosomal recessive disorder comprises mechanical skin fragility and photosensitivity, which manifest early in life. The progression of the disorder is irreversible and results in tissue damage in form of cutaneous and mucosal atrophy and scarring and epithelial cancers. Here, we unravel molecular mechanisms of increased UV-B sensitivity of keratinocytes derived from KS patients. We show that the pro-inflammatory cytokines, IL-1ß, IL-6 and TNF-α, are upregulated in KS skin and in UV-B irradiated KS keratinocytes. These cytokines are dependent on p38 activation, which is increased in the absence of kindlin-1 and induced by higher ROS levels. Other dysregulated cytokines and growth factors were identified in this study and might be involved in paracrine interactions contributing to KS pathology. We show a direct relationship between kindlin-1 abundance and UV-B induced apoptosis in keratinocytes, whereas kindlin-2 overexpression has no compensatory effect. Importantly, low levels of kindlin-1 are sufficient to relieve or rescue this feature. Reduction of pro-inflammatory cytokines and of UV-B induced apoptosis is a valid therapeutic goal to influence long term complications of KS. Here, we demonstrate that antioxidants and the plant flavonoid luteolin represent feasible topical therapeutic approaches decreasing UV-B induced apoptosis in two-dimensional and organotypic KS cultures. We provide evidence for potential new therapeutic approaches to mitigate the progressive course of KS, for which no cure is available to date. Furthermore, we established organotypic KS models, a valuable in vitro tool for research with a morphology similar to the skin of patients in situ.


Assuntos
Vesícula/tratamento farmacológico , Epidermólise Bolhosa/tratamento farmacológico , Inflamação/tratamento farmacológico , Luteolina/administração & dosagem , Proteínas de Membrana/genética , Proteínas de Neoplasias/genética , Doenças Periodontais/tratamento farmacológico , Transtornos de Fotossensibilidade/tratamento farmacológico , Antioxidantes/administração & dosagem , Apoptose/efeitos dos fármacos , Apoptose/efeitos da radiação , Vesícula/genética , Vesícula/patologia , Células Cultivadas , Epidermólise Bolhosa/genética , Epidermólise Bolhosa/patologia , Regulação da Expressão Gênica/efeitos dos fármacos , Regulação da Expressão Gênica/efeitos da radiação , Humanos , Inflamação/genética , Inflamação/patologia , Interleucina-1beta/biossíntese , Interleucina-1beta/genética , Interleucina-6/biossíntese , Interleucina-6/genética , Queratinócitos/efeitos dos fármacos , Queratinócitos/patologia , Queratinócitos/efeitos da radiação , Proteínas de Membrana/biossíntese , Proteínas de Neoplasias/biossíntese , Doenças Periodontais/genética , Doenças Periodontais/patologia , Transtornos de Fotossensibilidade/genética , Transtornos de Fotossensibilidade/patologia , Pele/efeitos dos fármacos , Pele/patologia , Pele/efeitos da radiação , Fator de Necrose Tumoral alfa/biossíntese , Fator de Necrose Tumoral alfa/genética , Raios Ultravioleta/efeitos adversos
9.
Annu Rev Genomics Hum Genet ; 15: 245-68, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-24898041

RESUMO

Genetic skin fragility manifests with diminished resistance of the skin and mucous membranes to external mechanical forces and with skin blistering, erosions, and painful wounds as clinical features. Skin fragility disorders, collectively called epidermolysis bullosa, are caused by mutations in 18 distinct genes that encode proteins involved in epidermal integrity and dermal-epidermal adhesion. The genetic spectrum, along with environmental and genetic modifiers, creates a large number of clinical phenotypes, spanning from minor localized lesions to severe generalized blistering, secondary skin cancer, or early demise resulting from extensive loss of the epidermis. Laboratory investigations of skin fragility have greatly augmented our understanding of genotype-phenotype correlations in epidermolysis bullosa and have also advanced skin biology in general. Current translational research concentrates on the development of biologically valid treatments with therapeutic genes, cells, proteins, or small-molecule compounds in preclinical settings or human pilot trials.


Assuntos
Epiderme/patologia , Epidermólise Bolhosa/genética , Pele/patologia , Pesquisa Translacional Biomédica , Epidermólise Bolhosa/patologia , Estudos de Associação Genética , Terapia Genética , Humanos , Mutação , Fenótipo , Pele/metabolismo
10.
Artigo em Alemão | MEDLINE | ID: mdl-28289776

RESUMO

There is high need for more research in the field of rare diseases. Not only must the causes and mechanisms of the numerous and often heterogeneous diseases be delineated, but criteria must also be defined for optimal stratification of patients for individualized therapies. In this context, research and innovative diagnostics are linked together more closely than in other fields of medicine. The early stages of disease-oriented research can be performed in individual institutions but, due to low numbers of patients, late translation and transfer into clinics requires multicentric and international collaboration. In Germany research on rare diseases takes place mostly in faculties of medicine at universities. Since the institutional financial support is very low, research grants have substantial significance. The German Research Foundation (DFG) and the Federal Ministry of Education and Research (BMBF) are the main grant agencies for national projects, but foundations and patient advocacy groups also finance research to a certain extent. The ERA-Net "E-Rare" and the programs of the EU target primarily international cross-border projects and patient trials. All of these programs need to be adapted more efficiently to the particular needs of rare disease research. For national and international research projects on rare diseases, sufficient funds are needed but also sustainable interdisciplinary platforms and centers must be established in order to share expert knowledge and to implement complex programs such as proof-of-concept studies in humans.


Assuntos
Pesquisa Biomédica/economia , Apoio Financeiro , Financiamento Governamental/economia , Alemanha , Humanos , Doenças Raras/economia
11.
Mol Ther ; 23(8): 1368-1379, 2015 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-25858020

RESUMO

Dystrophic epidermolysis bullosa (DEB) is an incurable skin fragility disorder caused by mutations in the COL7A1 gene, coding for the anchoring fibril protein collagen VII (C7). Life-long mechanosensitivity of skin and mucosal surfaces is associated with large body surface erosions, chronic wounds, and secondary fibrosis that severely impede functionality. Here, we present the first systematic long-term evaluation of the therapeutic potential of a mesenchymal stromal cell (MSC)-based therapy for DEB. Intradermal administration of MSCs in a DEB mouse model resulted in production and deposition of C7 at the dermal-epidermal junction, the physiological site of function. The effect was dose-dependent with MSCs being up to 10-fold more potent than dermal fibroblasts. MSCs promoted regeneration of DEB wounds via normalization of dermal and epidermal healing and improved skin integrity through de novo formation of functional immature anchoring fibrils. Additional benefits were gained by MSCs' anti-inflammatory effects, which led to decreased immune cell infiltration into injured DEB skin. In our setting, the clinical benefit of MSC injections lasted for more than 3 months. We conclude that MSCs are viable options for localized DEB therapy. Importantly, however, the cell number needed to achieve therapeutic efficacy excludes the use of systemic administration.


Assuntos
Epidermólise Bolhosa Distrófica/terapia , Células-Tronco Mesenquimais/citologia , Pele/patologia , Cicatrização , Animais , Anti-Inflamatórios/química , Colágeno Tipo VII/metabolismo , Modelos Animais de Doenças , Epiderme/metabolismo , Epidermólise Bolhosa Distrófica/imunologia , Fibroblastos/metabolismo , Humanos , Inflamação , Injeções Intradérmicas , Camundongos , Regeneração , Pele/metabolismo
12.
N Engl J Med ; 366(16): 1508-14, 2012 Apr 19.
Artigo em Inglês | MEDLINE | ID: mdl-22512483

RESUMO

Integrin α(3) is a transmembrane integrin receptor subunit that mediates signals between the cells and their microenvironment. We identified three patients with homozygous mutations in the integrin α(3) gene that were associated with disrupted basement-membrane structures and compromised barrier functions in kidney, lung, and skin. The patients had a multiorgan disorder that included congenital nephrotic syndrome, interstitial lung disease, and epidermolysis bullosa. The renal and respiratory features predominated, and the lung involvement accounted for the lethal course of the disease. Although skin fragility was mild, it provided clues to the diagnosis.


Assuntos
Epidermólise Bolhosa/genética , Integrina alfa3/genética , Pneumopatias/genética , Síndrome Nefrótica/genética , Epidermólise Bolhosa/imunologia , Epidermólise Bolhosa/patologia , Evolução Fatal , Feminino , Homozigoto , Humanos , Recém-Nascido , Rim/patologia , Pulmão/diagnóstico por imagem , Pulmão/patologia , Pneumopatias/diagnóstico , Masculino , Mutação , Síndrome Nefrótica/congênito , Síndrome Nefrótica/patologia , Radiografia , Pele/imunologia , Pele/patologia
13.
J Pathol ; 233(3): 269-80, 2014 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-24615351

RESUMO

Kindlins are a family of integrin adapter and cell-matrix adhesion proteins causally linked to human genetic disorders. Kindlin-2 is a ubiquitously expressed protein with manifold functions and interactions. The contribution of kindlin-2 to integrin-based cell-matrix adhesions has been extensively explored, while other integrin-independent roles emerge. Because of the early involvement of kindlin-2 in development, no viable animal models with its constitutional knockout are available to study its physiological functions in adult skin. Here, we uncovered a critical physiological role of kindlin-2 in the epidermis by using a skin-equivalent model with shRNA-mediated knock-down of kindlin-2 in keratinocytes. Kindlin-2-deficient keratinocytes built stratified epidermal layers, but displayed impaired dermal-epidermal and intra-epidermal adhesion and barrier function. Co-immunoprecipitation studies demonstrated that kindlin-2 interacts with both integrin- and cadherin-based adhesions. In kindlin-2-deficient keratinocytes, reduced cell-cell adhesion was associated with abnormal cytoplasmic distribution of adherens junctions and desmosomal proteins, which was dependent on RhoA activation. Direct activation of RhoA with recombinant bacterial cytotoxic necrotizing factor y (CNFy) reverted the abnormal phenotype and barrier function of kindlin-2-deficient keratinocytes and skin equivalents. These findings have physiological and pathological significance, since kindlin-2 expression modulates the phenotype in Kindler syndrome, a skin fragility disorder caused by kindlin-1 deficiency. Our results suggest that pharmacological regulation of RhoGTPase activity may represent a therapeutic option for skin fragility.


Assuntos
Toxinas Bacterianas/farmacologia , Adesão Celular/efeitos dos fármacos , Comunicação Celular/efeitos dos fármacos , Epiderme/efeitos dos fármacos , Queratinócitos/efeitos dos fármacos , Proteínas de Membrana/deficiência , Proteínas de Neoplasias/deficiência , Proteína rhoA de Ligação ao GTP/metabolismo , Linhagem Celular , Técnicas de Cocultura , Ativação Enzimática , Epiderme/enzimologia , Epiderme/patologia , Células Alimentadoras , Técnicas de Silenciamento de Genes , Genótipo , Humanos , Queratinócitos/enzimologia , Queratinócitos/patologia , Proteínas de Membrana/genética , Proteínas de Neoplasias/genética , Permeabilidade , Fenótipo , Interferência de RNA , Proteínas Recombinantes/farmacologia , Transdução de Sinais/efeitos dos fármacos , Transfecção
14.
J Am Acad Dermatol ; 72(1): 168-74, 2015 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-25443626

RESUMO

Mucous membrane pemphigoid encompasses a group of autoimmune bullous diseases with a similar phenotype characterized by subepithelial blisters, erosions, and scarring of mucous membranes, skin, or both. Although knowledge about autoimmune bullous disease is increasing, there is often a lack of clear definitions of disease, outcome measures, and therapeutic end points. With clearer definitions and outcome measures, it is possible to directly compare the results and data from various studies using meta-analyses. This consensus statement provides accurate and reproducible definitions for disease extent, activity, outcome measures, end points, and therapeutic response for mucous membrane pemphigoid and proposes a disease extent score, the Mucous Membrane Pemphigoid Disease Area Index.


Assuntos
Penfigoide Mucomembranoso Benigno/diagnóstico , Penfigoide Mucomembranoso Benigno/terapia , Humanos , Guias de Prática Clínica como Assunto , Registros , Resultado do Tratamento
15.
J Am Acad Dermatol ; 83(4): 1222-1224, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-32682031
17.
Acta Derm Venereol ; 95(3): 337-40, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25227139

RESUMO

Mutations in genes encoding for desmosomal components are associated with a broad spectrum of phenotypes comprising skin and hair abnormalities and account for 45-50% of cases of arrhythmogenic right ventricular cardiomyopathy. Today, more than 120 dominant and recessive desmoplakin (DSP) gene mutations have been reported to be associated with skin, hair and/or heart defects. Here we report on 3 cases with yet unreported DSP mutations, c.7566_7567delAAinsC, p.R2522Sfs*39, c.7756C>T, p.R2586*, c.2131_2132delAG and c.1067C>A, p.T356K, that were associated with variable woolly hair or hypotrichosis, palmoplantar keratoderma, and cardiac manifestations. In addition, we review and summarise the clinical features and DSP mutations of the patients described in the literature, which illustrates the complexity of this group of disorders and of their genotype-phenotype correlations, which cannot be easily predicted. Early diagnosis is crucial and cardiac examinations have to be performed on a regular basis.


Assuntos
Cardiomiopatias/genética , Desmoplaquinas/genética , Doenças do Cabelo/congênito , Ceratodermia Palmar e Plantar/genética , Mutação , Adolescente , Cardiomiopatias/diagnóstico , Criança , Pré-Escolar , Análise Mutacional de DNA , Feminino , Predisposição Genética para Doença , Doenças do Cabelo/diagnóstico , Doenças do Cabelo/genética , Hereditariedade , Humanos , Ceratodermia Palmar e Plantar/diagnóstico , Masculino , Linhagem , Fenótipo , Fatores de Risco
19.
Mol Cell Proteomics ; 12(9): 2509-21, 2013 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-23722187

RESUMO

Keratinocytes account for 95% of all cells of the epidermis, the stratified squamous epithelium forming the outer layer of the skin, in which a significant number of skin diseases takes root. Immortalized keratinocyte cell lines are often used as research model systems providing standardized, reproducible, and homogenous biological material. Apart from that, primary human keratinocytes are frequently used for medical studies because the skin provides an important route for drug administration and is readily accessible for biopsies. However, comparability of these cell systems is not known. Cell lines may undergo phenotypic shifts and may differ from the in vivo situation in important aspects. Primary cells, on the other hand, may vary in biological functions depending on gender and age of the donor and localization of the biopsy specimen. Here we employed metabolic labeling in combination with quantitative mass spectrometry-based proteomics to assess A431 and HaCaT cell lines for their suitability as model systems. Compared with cell lines, comprehensive profiling of the primary human keratinocyte proteome with respect to gender, age, and skin localization identified an unexpected high proteomic consistency. The data were analyzed by an improved ontology enrichment analysis workflow designed for the study of global proteomics experiments. It enables a quick, comprehensive and unbiased overview of altered biological phenomena and links experimental data to literature. We guide through our workflow, point out its advantages compared with other methods and apply it to visualize differences of cell lines compared with primary human keratinocytes.


Assuntos
Envelhecimento/metabolismo , Queratinócitos/metabolismo , Proteoma/metabolismo , Caracteres Sexuais , Pele/citologia , Adulto , Células Cultivadas , Biologia Computacional , Mineração de Dados , Feminino , Humanos , Masculino , Pessoa de Meia-Idade , Modelos Biológicos , Proteômica
20.
Mol Syst Biol ; 9: 657, 2013 Apr 16.
Artigo em Inglês | MEDLINE | ID: mdl-23591773

RESUMO

The mammalian cellular microenvironment is shaped by soluble factors and structural components, the extracellular matrix, providing physical support, regulating adhesion and signalling. A global, quantitative mass spectrometry strategy, combined with bioinformatics data processing, was developed to assess proteome differences in the microenvironment of primary human fibroblasts. We studied secreted proteins of fibroblasts from normal and pathologically altered skin and their post-translational modifications. The influence of collagen VII, an important structural component, which is lost in genetic skin fragility, was used as model. Loss of collagen VII had a global impact on the cellular microenvironment and was associated with proteome alterations highly relevant for disease pathogenesis including decrease in basement membrane components, increase in dermal matrix proteins, TGF-ß and metalloproteases, but not higher protease activity. The definition of the proteome of fibroblast microenvironment and its plasticity in health and disease identified novel disease mechanisms and potential targets of intervention.


Assuntos
Membrana Basal/metabolismo , Microambiente Celular/genética , Colágeno Tipo VII/genética , Derme/metabolismo , Epidermólise Bolhosa Distrófica/genética , Matriz Extracelular/genética , Fibroblastos/metabolismo , Membrana Basal/patologia , Estudos de Casos e Controles , Comunicação Celular , Colágeno Tipo VII/deficiência , Derme/patologia , Epidermólise Bolhosa Distrófica/metabolismo , Epidermólise Bolhosa Distrófica/patologia , Matriz Extracelular/patologia , Feminino , Fibroblastos/patologia , Expressão Gênica , Humanos , Lactente , Recém-Nascido , Masculino , Metaloproteases/genética , Metaloproteases/metabolismo , Cultura Primária de Células , Processamento de Proteína Pós-Traducional , Fator de Crescimento Transformador beta/genética , Fator de Crescimento Transformador beta/metabolismo
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