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1.
Commun Agric Appl Biol Sci ; 80(1): 37-43, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26630753

RESUMO

Six strains of acetic acid bacteria were isolated from Moroccan local products and their potential as industrial strains was evaluated in lab-bioreactor. Three of them, namely TAV01, AF01 and CV01, isolated from traditional apple vinegar, apple and cactus fruit, respectively were selected and their responses to high temperature were assessed. Morphological and biochemical identification confirmed that these strains belong to Acetobacter species. Their growth and acetic acid production were compared with the thermoresistant reference strain, Acetobacter senegalensis and mesophilic strains of Acetobacter pasteurianus. The two strains AF01 and CV01 showed abundant growth and noticeable acetic acid production ability at high temperatures (38 to 41°C). A thermophilic character was observed for AF01 strain. Indeed, this bacterium grew better at 38 than 30°C.


Assuntos
Acetobacter/classificação , Acetobacter/fisiologia , Microbiologia de Alimentos , Frutas/microbiologia , Temperatura Alta , Fermentação , Marrocos
2.
J Food Prot ; 73(4): 774-85, 2010 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-20377971

RESUMO

Salmonella is a human pathogen that frequently infects poultry flocks. Consumption of raw or undercooked contaminated poultry products can induce acute gastroenteritis in humans. Faced with the public health concerns associated with salmonellosis, the European Union has established a European regulation forcing member states to implement control programs aimed at reducing Salmonella prevalence in poultry production, especially at the primary production level. The purpose of the present review article is to summarize the current research and to suggest future developments in the area of Salmonella control in poultry, which may be of value to the industry in the coming years. The review will focus especially on preventive strategies that have been developed and that aim at reducing the incidence of Salmonella colonization in broiler chickens at the farm level. In addition to the usual preventive hygienic measures, other strategies have been investigated, such as feed and drinking water acidification with organic acids and immune strategies based on passive and active immunity. Modification of the diet by changing ingredients and nutrient composition with the intent of reducing a bird's susceptibility to Salmonella infection also has been examined. Because in ovo feeding accelerates small intestine development and enhances epithelial cell function, this approach could be an efficient tool for controlling enteric pathogens. Feed additives such as antibiotics, prebiotics, probiotics, and synbiotics that modify the intestinal microflora are part of another field of investigation, and their success depends on the additive used. Other control methods such as the use of chlorate products and bacteriophages also are under study.


Assuntos
Criação de Animais Domésticos/métodos , Galinhas , Contaminação de Alimentos/prevenção & controle , Doenças das Aves Domésticas/prevenção & controle , Salmonelose Animal/prevenção & controle , Salmonella/crescimento & desenvolvimento , Ração Animal/análise , Animais , Humanos , Higiene , Carne/microbiologia , Doenças das Aves Domésticas/microbiologia , Doenças das Aves Domésticas/transmissão , Fatores de Risco , Salmonelose Animal/microbiologia , Salmonelose Animal/transmissão
3.
J Ind Microbiol Biotechnol ; 37(3): 225-36, 2010 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-19350298

RESUMO

Yeast is a widely used microorganism at the industrial level because of its biomass and metabolite production capabilities. However, due to its sensitivity to the glucose effect, problems occur during scale-up to the industrial scale. Hydrodynamic conditions are not ideal in large-scale bioreactors, and glucose concentration gradients can arise when these bioreactors are operating in fed-batch mode. We have studied the effects of such gradients in a scale-down reactor, which consists of a mixed part linked to a non-mixed part by a recirculation pump, in order to mimic the hydrodynamic conditions encountered at the large scale. During the fermentation tests in the scale-down reactor, there was a drop in both biomass yield (ratio between the biomass produced and the glucose added) and trehalose production and an increase in both fermentation time (time between inoculation and beginning of stationary phase) and ethanol production. We have developed a stochastic model which explains these effects as the result of an induction process determined mainly by the hydrodynamic conditions. The concentration profiles experienced by the microorganisms during the scale-down tests were expressed and linked to the biomass yields of the scale-down tests.


Assuntos
Reatores Biológicos/microbiologia , Meios de Cultura/química , Microbiologia Industrial , Saccharomyces cerevisiae/crescimento & desenvolvimento , Saccharomyces cerevisiae/metabolismo , Biomassa , Etanol/metabolismo , Fermentação , Glucose/metabolismo , Fatores de Tempo , Trealose/metabolismo
4.
Biophys J ; 96(12): 4814-25, 2009 Jun 17.
Artigo em Inglês | MEDLINE | ID: mdl-19527641

RESUMO

The Thermomyces lanuginosa lipase has been extensively studied in industrial and biotechnological research because of its potential for triacylglycerol transformation. This protein is known to catalyze both hydrolysis at high water contents and transesterification in quasi-anhydrous conditions. Here, we investigated the Thermomyces lanuginosa lipase structure in solution in the presence of a tributyrin aggregate using 30 ns molecular-dynamics simulations. The water content of the active-site groove was modified between the runs to focus on the protein-water molecule interactions and their implications for protein structure and protein-lipid interactions. The simulations confirmed the high plasticity of the lid fragment and showed that lipid molecules also bind to a secondary pocket beside the lid. Together, these results strongly suggest that the lid plays a role in the anchoring of the protein to the aggregate. The simulations also revealed the existence of a polar channel that connects the active-site groove to the outside solvent. At the inner extremity of this channel, a tyrosine makes hydrogen bonds with residues interacting with the catalytic triad. This system could function as a pipe (polar channel) controlled by a valve (the tyrosine) that could regulate the water content of the active site.


Assuntos
Ascomicetos/enzimologia , Proteínas Fúngicas/química , Lipase/química , Triglicerídeos/química , Água/química , Sequência de Aminoácidos , Sítios de Ligação , Domínio Catalítico , Ligação de Hidrogênio , Modelos Moleculares , Dados de Sequência Molecular , Estrutura Terciária de Proteína , Alinhamento de Sequência
5.
Mol Plant Microbe Interact ; 22(4): 456-68, 2009 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-19271960

RESUMO

Multiple strains of Bacillus subtilis were demonstrated to stimulate plant defense responses, and cyclic lipopeptides may be involved in the elicitation of this induced systemic resistance phenomenon. Here, we further investigated molecular events underlying the interaction between such lipopeptides and plant cells. Addition of surfactin but not fengycin or iturin in the micromolar range to tobacco cell suspensions induced defense-related early events such as extracellular medium alkalinization coupled with ion fluxes and reactive oxygen species production. Surfactin also stimulated the defense enzymes phenylalanine ammonia lyase and lipoxygenase and modified the pattern of phenolics produced by the elicited cells. The occurrence of these surfactin-elicited early events is closely related to Ca(2+) influx and dynamic changes in protein phosphorylation but is not associated with any marked phytotoxicity or adverse effect on the integrity and growth potential of the treated tobacco cells. Reduced activity of some homologues also indicates that surfactin perception is dictated by structural clues in both the acyl moiety and cyclic peptide part. Our results suggest that these molecules could interact without irreversible pore formation but in a way sufficient to induce disturbance or transient channeling in the plasma membrane that can, in turn, activate a biochemical cascade of molecular events leading to defensive responses. The present study sheds new light not only on defense-related events induced following recognition of amphiphilic lipopeptides from Bacillus spp. but also more globally on the way elicitors from beneficial bacteria can be perceived by host plant cells.


Assuntos
Bacillus subtilis/metabolismo , Proteínas de Bactérias/metabolismo , Lipopeptídeos/farmacologia , Nicotiana/metabolismo , Peptídeos Cíclicos/farmacologia , Doenças das Plantas/microbiologia , Sobrevivência Celular , Células Cultivadas , Regulação da Expressão Gênica de Plantas , Peróxido de Hidrogênio/metabolismo , Concentração de Íons de Hidrogênio , Fenóis/metabolismo , Fatores de Tempo , Nicotiana/efeitos dos fármacos , Nicotiana/microbiologia
6.
Food Microbiol ; 26(6): 623-8, 2009 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-19527838

RESUMO

In realistic model meat systems, the separate and combined effects of fat content and sodium nitrite on the antilisterial activity of the bacteriocin of Lactobacillus curvatus CWBI-B28 were studied. In laboratory fermentations where Listeria monocytogenes was co-cultured at 4 degrees C with bacteriocin-producing CWBI-B28 in lean pork meat (fat content: 13%) without added nitrite, a strong antilisterial effect was observed after one week. The effect was maintained for an additional week, after which a slight and very gradual rebound was observed. Both added nitrite (20 ppm) and a high-fat content (43%) were found to antagonise this antilisterial effect, the Listeria cfu count reached after six weeks being 200 times as high in high-fat meat with added nitrite than in lean meat without nitrite. This antagonism could not be attributed to slower growth of the bacteriocin-producing strain, since CWBI-B28 grew optimally in fat-rich meat with 20 ppm sodium nitrite. Bacteriocin activity was also measured in the samples. The observed activity levels are discussed in relation to the degree of antilisterial protection conferred.


Assuntos
Gorduras na Dieta/farmacologia , Conservação de Alimentos/métodos , Lactobacillus/fisiologia , Listeria monocytogenes/crescimento & desenvolvimento , Produtos da Carne/microbiologia , Nitrito de Sódio/farmacologia , Animais , Antibiose , Bacteriocinas/biossíntese , Bacteriocinas/farmacologia , Técnicas de Cocultura , Contaminação de Alimentos/análise , Contaminação de Alimentos/prevenção & controle , Conservantes de Alimentos/farmacologia , Humanos , Lactobacillus/metabolismo , Listeria monocytogenes/efeitos dos fármacos , Suínos
7.
Poult Sci ; 88(8): 1643-54, 2009 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-19590080

RESUMO

Three experiments were performed to assess the ability of a Lactobacillus plantarum probiotic combined with a xylanase to reduce the effects of Salmonella Typhimurium infection in broiler chickens from 1 to 30 or 42 d of age. Chicks were challenged at 3 d of age with 10(8) or 10(5) cfu Salmonella Typhimurium/chick. Four diets were studied: a wheat-based diet (C+) supplemented with 0.1 g/kg of xylanase (E) or 10(6) cfu/g of L. plantarum (P), or both (PE). Uninfected chicks fed the C diet were used as negative control (C-). Six or 8 chicks were housed per cage with 9 cages/treatment. Growth performance and feed conversion ratio (FCR) were recorded weekly. In experiment 1, bacterial enumeration in ceca was achieved using the fluorescent in situ hybridization technique. Salmonella enumeration was realized in excreta by microbiological cultures (experiments 2 and 3). Nutrient digestibilities and AME(n) were determined in experiment 3 from d 35 to 39. Infection with Salmonella Typhimurium led to a significant decrease in the daily weight gain (DWG) by 23.6 to 32.8%, whereas FCR was increased by 1.0 to 19.7%. Chickens fed the PE diet showed significantly improved performance in comparison with C+ birds (DWG: +12.5% in experiment 1; FCR: -2.1 to 8.6%), and in comparison with the P and E treatments (DWG: +6.3 to 8.3% in experiment 1; FCR: -2.7 to 6.4%). In experiment 3, the FCR was significantly improved by 3% with the PE diet in comparison with C- chickens. The PE combination tended to restore a microflora similar to that of uninfected broilers, whereas the P and E diets had less of an effect on the profile of bacterial communities. At slaughter age, Salmonella contamination was reduced by 2.00 and 1.85 log colony-forming units for the E and PE treatment, respectively. The PE diet significantly reduced the crude fat digestibility by 9.2%, in comparison with the C+ chickens. These results suggest that the combination between L. plantarum and a xylanase as feed additive could be effective for reduction of the detrimental effect after Salmonella Typhimurium infection of broilers.


Assuntos
Galinhas , Endo-1,4-beta-Xilanases/farmacologia , Lactobacillus plantarum , Probióticos , Salmonelose Animal/microbiologia , Salmonella typhimurium , Animais , Peso Corporal , Digestão/fisiologia , Ingestão de Alimentos , Endo-1,4-beta-Xilanases/administração & dosagem , Feminino , Intestinos/microbiologia , Masculino , Doenças das Aves Domésticas/microbiologia , Doenças das Aves Domésticas/terapia , Salmonelose Animal/terapia
8.
J Food Prot ; 71(2): 431-4, 2008 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-18326201

RESUMO

The survival rate of five freeze-dried bacteria species, Lactobacillus plantarum, Lactobacillus pentosus, Weisella paramesenteroides, Leuconostoc mesenteroides, and Lactobacillus fermentum, was described in terms of reaction rate constants (D or k) and temperature sensitivity of rate constants (z or Ea). The freeze-dried strains were stored under vacuum at 55, 37, and 4 degrees C for 168 h, 17 days, and 2 months, respectively. D-values decreased and k increased with an increase of the storage temperature. Neither the z-value nor the inactivation energy (Ea) of the reaction was significantly different (P > 0.05) for all the strains, suggesting that thermal inactivation of the freeze-dried lactic acid bacteria may occur by the same mechanism. Therefore, it was possible to compare rate constants of survival for the freeze-dried strains studied.


Assuntos
Manipulação de Alimentos/métodos , Conservação de Alimentos/métodos , Liofilização/métodos , Lactobacillus/crescimento & desenvolvimento , Modelos Biológicos , Contagem de Colônia Microbiana , Humanos , Cinética , Matemática , Temperatura , Fatores de Tempo , Vácuo
9.
Lett Appl Microbiol ; 47(6): 581-6, 2008 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-19120930

RESUMO

AIM: The study aimed to evaluate the effect of the bacteriocins produced by Lactobacillus sakei CWBI-B1365 and Lactobacillus curvatus CWBI-B28 on the growth and survival of Listeria monocytogenes in raw beef and poultry meat. METHODS AND RESULTS: The sakacin P and sakacin G structural genes were identified in Lact. curvatus CWBI-B28 and Lact. sakei CWBI-B1365 using PCR amplification, respectively. The effect of the two bacteriocinogenic strains either alone or together, and that of the nonbacteriocin-producing strain Lact. sakei LMG17302, on the growth of L. monocytogenes was evaluated in beef and poultry meat. In raw beef, the pathogenic bacteria were inhibited by the bacteriocinogenic strains. The bacteriocinogenic strains had no activity in raw chicken meat when inoculated separately, while they showed a clear anti-Listeria effect when applied together. CONCLUSION: Sakacin G producing Lact. sakei and sakacin P producing Lact. curvatus may be applied in raw beef to inhibit L. monocytogenes. In poultry meat, the inhibition of L. monocytogenes could only be achieved by a combined application of these bacteriocin-producing strains. SIGNIFICANCE AND IMPACT OF THE STUDY: In some meat products, the combined application of different class IIa bacteriocin producing lactic acid bacterium can enhance the anti-listerial activity.


Assuntos
Antibiose , Bacteriocinas/metabolismo , Lactobacillus/isolamento & purificação , Lactobacillus/fisiologia , Listeria monocytogenes/fisiologia , Carne/microbiologia , Animais , Bovinos , Galinhas , Lactobacillus/genética
10.
Prep Biochem Biotechnol ; 38(3): 217-28, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-18569869

RESUMO

This work investigated the effects of monopropylene glycol, protease inhibitor, and gamma irradiation on Yarrowia lipolytica lipase stability during storage. Enzyme liquid stabilization was achieved by addition of monopropylene glycol (MPG) at respective concentrations of 50, 75, and 90%, the protease inhibitors (P2714 and P8215) at 0.1%, and the gamma irradiation with 10kGy, 15kGy, and 25kGy doses. The results showed that monopropylene glycol limited the microorganism growth and decreased the enzymatic activity at high concentration (up to 50%), at two temperatures (20 and 4 degrees C). Enzyme stored at 20 degrees C lost its activity by 80% after two months. This loss was attributed to the protease's effect. At this temperature, the protease's activities have been limited by the specific inhibitors. The gamma irradiations improve microbial safety of liquid enzyme.


Assuntos
Lipase/química , Lipase/efeitos da radiação , Propilenoglicol/química , Yarrowia/enzimologia , Relação Dose-Resposta a Droga , Relação Dose-Resposta à Radiação , Estabilidade de Medicamentos , Armazenamento de Medicamentos , Estabilidade Enzimática/efeitos da radiação , Raios gama
11.
Int J Food Microbiol ; 114(3): 342-51, 2007 Mar 20.
Artigo em Inglês | MEDLINE | ID: mdl-17188771

RESUMO

A total of 375 lactic acid bacteria were isolated from fermenting cassava in South Africa, Benin, Kenya and Germany, and were characterised by phenotypic and genotypic tests. These could be divided into five main groups comprising strains of facultatively heterofermentative rods, obligately heterofermentative rods, heterofermentative cocci, homofermentative cocci and obligately homofermentative rods, in decreasing order of predominance. Most of the facultatively heterofermentative rods were identified by phenotypic tests as presumptive Lactobacillus plantarum-group strains, which also comprised the most predominant bacteria (54.4% of strains) isolated in the study. The next predominant group of lactic acid bacteria (14.1% of total isolates) consisted of obligately heterofermentative rods belonging either to the genus Lactobacillus or Weissella, followed by the heterofermentative cocci (13.9% of isolates) belonging to the genera Weissella or Leuconostoc. Homofermentative cocci were also isolated (13.3% of isolates). Biochemical properties such as production of alpha-amylase, beta-glucosidase, tannase, antimicrobials (presumptive bacteriocin and H(2)O(2)-production), acidification and fermentation of the indigestible sugars raffinose and stachyose, were evaluated in vitro for selection of potential starter strains. A total of 32 strains with one or more desirable biochemical properties were pre-selected and identified using rep-PCR fingerprinting in combination with 16S rRNA sequencing of representative rep-PCR cluster isolates. Of these strains, 18 were identified as L. plantarum, four as Lactobacillus pentosus, two each as Leuconostoc fallax, Weissella paramesenteroides and Lactobacillus fermentum, one each as Leuconostoc mesenteroides subsp. mesenteroides and Weissella cibaria, while two remained unidentified but could be assigned to the L. plantarum-group. These strains were further investigated for clonal relationships, using RAPD-PCR with three primers, and of the 32 a total of 16 strains were finally selected for the development as starter cultures for Gari production.


Assuntos
Microbiologia de Alimentos , Lactobacillus/classificação , Lactobacillus/isolamento & purificação , Manihot/microbiologia , Filogenia , DNA Ribossômico/análise , Fermentação , Genótipo , Lactobacillus plantarum/classificação , Lactobacillus plantarum/isolamento & purificação , Leuconostoc/classificação , Leuconostoc/isolamento & purificação , Manihot/metabolismo , Dados de Sequência Molecular , Fenótipo , RNA Ribossômico 16S/genética , Técnica de Amplificação ao Acaso de DNA Polimórfico
12.
Biotechnol Prog ; 22(4): 1114-24, 2006.
Artigo em Inglês | MEDLINE | ID: mdl-16889388

RESUMO

A stochastic microbial growth model has been elaborated in the case of the culture of E. coli in fed-batch and scale-down reactors. This model is based on the stochastic determination of the generation time of the microbial cells. The determination of generation time is determined by choosing the appropriate value on a log-normal distribution. The appropriateness of such distribution is discussed and growth curves are obtained that show good agreement compared with the experimental results. The mean and the standard deviation of the log-normal distribution can be considered to be constant during the batch phase of the culture, but they vary when the fed-batch mode is started. It has been shown that the parameters related to the log-normal distribution are submitted to an exponential evolution. The aim of this study is to explore the bioreactor hydrodynamic effect on microbial growth. Thus, in a second time, the stochastic growth model has been reinforced by data coming from a previous stochastic bioreactor mixing model (1). The connection of these hydrodynamic data with the actual stochastic growth model has allowed us to explain the scale-down effect associated with the glucose concentration fluctuations. It is important to point out that the scale-down effect is induced differently according to the feeding strategy involved in the fed-batch experiments.


Assuntos
Reatores Biológicos , Simulação por Computador , Escherichia coli/crescimento & desenvolvimento , Escherichia coli/metabolismo , Escherichia coli/fisiologia , Microbiologia Industrial/métodos , Processos Estocásticos , Fatores de Tempo
13.
Biotechnol Prog ; 22(1): 259-69, 2006.
Artigo em Inglês | MEDLINE | ID: mdl-16454518

RESUMO

The mechanisms of interaction between microorganisms and their environment in a stirred bioreactor can be modeled by a stochastic approach. The procedure comprises two submodels: a classical stochastic model for the microbial cell circulation and a Markov chain model for the concentration gradient calculus. The advantage lies in the fact that the core of each submodel, i.e., the transition matrix (which contains the probabilities to shift from a perfectly mixed compartment to another in the bioreactor representation), is identical for the two cases. That means that both the particle circulation and fluid mixing process can be analyzed by use of the same modeling basis. This assumption has been validated by performing inert tracer (NaCl) and stained yeast cells dispersion experiments that have shown good agreement with simulation results. The stochastic model has been used to define a characteristic concentration profile experienced by the microorganisms during a fermentation test performed in a scale-down reactor. The concentration profiles obtained in this way can explain the scale-down effect in the case of a Saccharomyces cerevisiae fed-batch process. The simulation results are analyzed in order to give some explanations about the effect of the substrate fluctuation dynamics on S. cerevisiae.


Assuntos
Reatores Biológicos , Meios de Cultura/química , Saccharomyces cerevisiae/crescimento & desenvolvimento , Processos Estocásticos , Simulação por Computador
14.
J Food Prot ; 69(5): 1066-71, 2006 May.
Artigo em Inglês | MEDLINE | ID: mdl-16715806

RESUMO

The inhibition effectiveness of a bacteriocin produced by Lactobacillus curvatus CWBI-B28 against Listeria monocytogenes was investigated in cold-smoked salmon during storage at 4 degrees C. Three bacteriocin-based strategies for the control of L. monocytogenes in foods (i.e., producing bacteriocin in situ, spraying with partially purified bacteriocin, and packaging in bacteriocin-coated plastic film), plus a newly developed method that uses cell-adsorbed bacteriocin (i.e., a suspension of producer cells on which maximum bacteriocin has been immobilized by pH adjustments), were assessed. Although all the approaches inactivated L. monocytogenes in cold-smoked salmon, various efficacy levels were observed. The behavior of L. monocytogenes was similar in samples treated with either partially purified bacteriocin or in situ bacteriocin production. In both of these cases, the counts of the pathogen declined to below the detectable limit of 0.7 log CFU/cm2 within the first week, but a approximately 0.95- and 1.3-log increase, respectively, occurred after day 14. The bioactive packaging film resulted in a slower inactivation of the pathogen but prevented any subsequent increase in the CFU throughout 22 days of storage at 4 degrees C. Application of the cell-adsorbed bacteriocin was shown to be the most effective means, as it resulted in a complete inactivation of the pathogen within 3 days, and no increase in Listeria counts occurred up to 22 days.


Assuntos
Bacteriocinas/biossíntese , Conservação de Alimentos/métodos , Lactobacillus/fisiologia , Listeria monocytogenes/crescimento & desenvolvimento , Salmão/microbiologia , Alimentos Marinhos/microbiologia , Animais , Antibiose , Bacteriocinas/farmacologia , Contagem de Colônia Microbiana , Qualidade de Produtos para o Consumidor , Embalagem de Alimentos/métodos , Humanos , Listeria monocytogenes/efeitos dos fármacos , Temperatura , Fatores de Tempo
15.
Appl Biochem Biotechnol ; 129-132: 392-404, 2006.
Artigo em Inglês | MEDLINE | ID: mdl-16915656

RESUMO

In this article, we describe the development of a simple laboratory test for the effective screening of foam control agents on a selected fermentation system, the mass production of Yarrowia lipolytica. Aeration testing is based on sparging air in the foaming medium allowing partial reproduction of the gas-liquid hydrodynamic encountered in bioreactors. "Dynamic sparge test," for which measurements are made during foam formation, was used to compare the capacity of three antifoams, based on different technologies, to control the foam produced in the fermentation broth. The selected foam control agents were: (1) an organic antifoam (TEGO AFKS911), (2) a silicone-based emulsion containing in situ treated silica (DC-1520) and (3) a silicone/ organic blend silica-free formulation. The testing results demonstrated dramatic differences among them and showed that the capacity of TEGO AFKS911 and DC-1520 to control the foam generated in the fermentation broth decreases as a function of fermentation time. This occurred to a much lesser extent for the silicone/ organic blend formulation. These results were correlated with the change of the foam nature and the increase of foam stability of the fermentation broth with culture time. The increase in protein content as a function of growth time was correlated with an increase in foam stability and antifoam consumption. A "synthetic fermentation broth" was also developed, by adding both proteins and microorganism to the culture medium. This allowed us to mimic the fermentation broth, shown by the similar antifoams behaviour, and is therefore a simple methodology useful for the selection of appropriate antifoams.


Assuntos
Reatores Biológicos/microbiologia , Técnicas de Cultura de Células/métodos , Meios de Cultura/química , Meios de Cultura/metabolismo , Glucose/metabolismo , Silicones/química , Yarrowia/fisiologia , Movimentos do Ar , Proliferação de Células , Sobrevivência Celular , Retroalimentação , Fermentação , Gases/química , Projetos Piloto
16.
Bioresour Technol ; 214: 450-459, 2016 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-27160955

RESUMO

Flow cytometry (FCM) is a high throughput single cell technology that is actually becoming widely used for studying phenotypic and genotypic diversity among microbial communities. This technology is considered in this work for the assessment of a bioaugmentation treatment in order to enhance cellulolytic potential of landfill leachate. The experimental results reveal the relevant increase of leachate cellulolytic potential due to bioaugmentation. Cytometric monitoring of microbial dynamics along these assays is then realized. The flow FP package is used to establish microbial samples fingerprint from initial 2D cytometry histograms. This procedure allows highlighting microbial communities' variation along the assays. Cytometric and 16S rRNA gene sequencing fingerprinting methods are then compared. The two approaches give same evidence about microbial dynamics throughout digestion assay. There are however a lack of significant correlation between cytometric and amplicon sequencing fingerprint at genus or species level. Same phenotypical profiles of microbiota during assays matched to several 16S rRNA gene sequencing ones. Flow cytometry fingerprinting can thus be considered as a promising routine on-site method suitable for the detection of stability/variation/disturbance of complex microbial communities involved in bioprocesses.


Assuntos
Celulose/análise , Citometria de Fluxo , Análise de Sequência de DNA , Poluentes Químicos da Água/análise , Reatores Biológicos/microbiologia , Impressões Digitais de DNA , DNA Bacteriano/fisiologia , Monitoramento Ambiental , Amplificação de Genes/fisiologia
17.
Biochim Biophys Acta ; 1513(1): 55-62, 2001 Jul 02.
Artigo em Inglês | MEDLINE | ID: mdl-11427194

RESUMO

Phase imaging with tapping mode atomic force microscopy (AFM) and force modulation microscopy were used to probe the mechanical properties of phase-separated lipid monolayers made of a mixture (0.25:0.75) of the surface-active lipopeptide surfactin and of dipalmitoylphosphatidylcholine (DPPC). The pi-A isotherms and the result of a molecular modeling study revealed a loose, 2-D liquid-like organization for the surfactin molecules and a closely packed, 2-D solid-like organization for DPPC molecules. This difference in molecular organization was responsible for a significant contrast in height, tapping mode phase and force modulation amplitude images. Phase imaging at light tapping, i.e., with a ratio of the set-point tapping amplitude with respect to the free amplitude A(sp)/A(0) approximately 0.9, showed larger phase shifts on the solid-like DPPC domains attributed to larger Young's modulus. However, contrast inversion was observed for A(sp)/A(0)<0.7, suggesting that at moderate and hard tapping the image contrast was dominated by the probe-sample contact area. Surprisingly, force modulation amplitude images showed larger stiffness for the liquid-like surfactin domains, suggesting that the contrast was dominated by contact area effects rather than by Young's modulus. These data emphasize the complex nature of the contrast mechanisms of dynamic AFM images recorded on mixed lipid monolayers.


Assuntos
Lipídeos de Membrana/química , Microscopia de Força Atômica/métodos , Peptídeos Cíclicos , 1,2-Dipalmitoilfosfatidilcolina/química , Proteínas de Bactérias/química , Lipopeptídeos , Membranas Artificiais , Modelos Moleculares , Estrutura Molecular
18.
Chem Biol ; 6(1): 31-41, 1999 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-9889147

RESUMO

BACKGROUND: Bacillus subtilis strains produce a broad spectrum of lipopeptides that are potent biosurfactants and have specific antimicrobial and antiviral activities. The cyclic lipodecapeptide fengycin is one such compound. Although the fengycin biosynthetic genes in B. subtilis 168 (pps genes) and F29-3 (fen genes) have been well characterized, only limited information is available about the biochemical features of the fengycin synthetase multienzyme system. RESULTS: Five multifunctional peptide synthetases (Fen1-5) that catalyze biosynthesis of the peptide portion of fengycin have been purified from crude extracts of the B. subtilis b213 and A1/3 strains. These enzymes activate all fengycin amino-acid components as aminoacyl adenylates or aminoacyl thioesters. Fen1, Fen2 and Fen3 are each approximately 286 kDa, Fen4 is approximately 400 kDa and Fen 5 is approximately 140kDa; each enzyme activates a different set of L-amino acids. A five-gene cluster (fen1-5) was detected in the B. subtilis A1/3 genome that shows high homology to the pps and fen genes in B. subtilis strains 168 and F29-3. Disruption of fen4 resulted in a loss of fengycin production. The fengycin synthetase enzymes isolated from B. subtilis b213 were assigned to the corresponding A1/3 fen genes by their amino-terminal sequences. CONCLUSIONS: The structural and functional organization of the fengycin synthetase system from B. subtilis b213 has been characterized in detail and correlated with the corresponding pps and fen genes in B. subtilis strains 168, A1/3 and F29-3. Biosynthesis of the peptide part of fengycin involves five multifunctional modular proteins that assemble the lipopeptide chain using a nonribosomal, multiple carrier thiotemplate mechanism.


Assuntos
Bacillus subtilis/enzimologia , Complexos Multienzimáticos/química , Peptídeo Sintases/química , Peptídeos Cíclicos , Sequência de Aminoácidos , Antibióticos Antineoplásicos/biossíntese , Antifúngicos/biossíntese , Bacillus subtilis/genética , Proteínas de Bactérias/biossíntese , Lipopeptídeos , Lipoproteínas/biossíntese , Dados de Sequência Molecular , Complexos Multienzimáticos/isolamento & purificação , Complexos Multienzimáticos/fisiologia , Família Multigênica , Mutação , Fases de Leitura Aberta , Peptídeo Sintases/genética , Peptídeo Sintases/isolamento & purificação , Peptídeo Sintases/fisiologia , Homologia de Sequência de Aminoácidos
19.
Water Res ; 39(16): 4004-10, 2005 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-16135380

RESUMO

In the present study a practical model useful for designers dealing with pilot scale reactors for pollutant control has been developed. Investigations were undertaken for a single-component lead study on New Zealand clinoptilolite at the temperature of 25+/-1 degrees C. Fifteen runs under different operating conditions such as particle characteristics (expressed as d*(p)/D), column geometry (as l*/D) and flow speed (as R*e) have been performed. The results were interpreted by a response surface method (RSM) from which an equation giving the unused bed zone (UBZ) was obtained. From those dimensionless parameters, a sequence of contour plots was drawn, making it easy for a designer to choose optimum design parameters while controlling the operation performance. The flow rate (R*e) range was established over the laminar flow conditions from 1 to 8, (l/D*) was extended from 7 to 20 and (d(p)/D*) varied from 3% to 10%. Optimization of performance of the reactor as UBZ could vary from 10% to 40% of the material operating capacity.


Assuntos
Reatores Biológicos , Poluentes da Água/isolamento & purificação , Purificação da Água/métodos , Desenho de Equipamento , Previsões , Modelos Teóricos , Temperatura , Movimentos da Água
20.
Bioresour Technol ; 189: 138-144, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25879181

RESUMO

A cellulolytic consortium was isolated from a composting plant in order to boost the initial hydrolysis step encountered in anaerobic digestion. Improvement of the cellulose degradation, as well as biogas production, was observed for the cultures inoculated with the exogenous consortium. Metagenomics analyses pointed out a weak richness (related to the number of OTUs) of the exogenous consortium induced by the selective pressure (cellulose as sole carbon source) met during the initial isolation steps. Main microbial strains determined were strictly anaerobic and belong to the Clostridia class. During cellulose anaerobic degradation, pH drop induced a strong modification of the microbial population. Despite the fact that richness and evenness were very weak, the exogenous consortium was able to adapt and to maintain the cellulolytic degradation potential. This important result point out the fact that simplified microbial communities could be used in order to increase the robustness of mixed cultures involved in environmental biotechnology.


Assuntos
Biomassa , Celulose/metabolismo , Consórcios Microbianos , Plantas/microbiologia , Eliminação de Resíduos/métodos , Solo , Temperatura , Anaerobiose , Biocombustíveis , Ácidos Graxos Voláteis/análise , Concentração de Íons de Hidrogênio , Cinética , Metano/biossíntese
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