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1.
Community Ment Health J ; 59(4): 770-783, 2023 05.
Article in English | MEDLINE | ID: mdl-36477688

ABSTRACT

In Uganda, low resources for mental health provision combine with disadvantage and inadequate supports for family and community-based care. Catalysed by the need to reduce overcrowded psychiatric hospital wards and frequent readmissions at Butabika National Referral Mental Hospital (BNRMH) in Kampala, the nongovernment organisation YouBelong Uganda (YBU) developed the YouBelong Home (YBH) intervention. YBH is a theoretically eclectic pre and post hospital discharge intervention. This paper reports on qualitative findings of the project Curtailing Hospital Readmissions for Patients with Severe Mental Illness in Africa (CHaRISMA), which explored how to refine the YBH intervention. The project was funded by a UK Joint Global Health Trials (JGHT) Development Grant. Data was collected through structured interviews with service users and caregivers, reflective practice by the YBH implementing team and a stakeholder focus group. A summary of refinements to the YBH intervention follows the TIDieR format (Template for Intervention Description and Replication).


Subject(s)
Community Mental Health Services , Home Care Services , Uganda , Humans , Male , Female , Young Adult , Adult , Middle Aged , Aged , Focus Groups , Interviews as Topic , Caregivers , Stakeholder Participation , Patient Discharge
2.
J Exp Med ; 162(6): 1760-70, 1985 Dec 01.
Article in English | MEDLINE | ID: mdl-3877777

ABSTRACT

Sera from individual MRL/lpr and MRL/++ mice, which develop an autoimmune disease similar to human systemic lupus erythematosus (SLE), were screened over a period of approximately 30 wk for the presence of anti-RNA polymerase I and anti-ssDNA antibodies. Even though onset of the disease is delayed in MRL/++ as compared to MRL/lpr mice, anti-ssDNA antibodies were present in comparable concentrations in the sera of all mice by the age of 6 wk. As observed in sera of human SLE patients, anti-RNA polymerase I antibodies were detected in the sera of all MRL mice. However, unlike the anti-ssDNA antibodies, anti-RNA polymerase I antibodies were detected much later in MRL/++ mice (mean age, 22.8 wk) as compared to MRL/lpr mice (mean age, 9.6 wk). The presence of anti-RNA polymerase I antibodies in sera of MRL mice was thus a much better indicator of disease status than the presence of anti-ssDNA antibodies. The appearance and increase in anti-RNA polymerase I antibodies in the sera of MRL/++ mice correlated (R2 = 0.964) with a precipitous decrease in anti-ssDNA antibodies, starting at about 20 wk of age. These results suggest a possible relationship between the RNA polymerase I and DNA autoimmune reactions.


Subject(s)
Antibodies, Antinuclear/biosynthesis , Lupus Erythematosus, Systemic/immunology , Mice, Inbred Strains/immunology , RNA Polymerase I/immunology , Animals , DNA, Single-Stranded/immunology , Disease Models, Animal , Female , Lupus Erythematosus, Systemic/physiopathology , Male , Mice , Mice, Inbred BALB C , Sex Characteristics , Time Factors
3.
Science ; 178(4061): 639-40, 1972 Nov 10.
Article in English | MEDLINE | ID: mdl-4343765

ABSTRACT

An enzyme that polymerizes adenylate residues from adenosine triphosphate was prepared from rat liver mitochondria and compared to similar preparations from the mitochondria of three hepatomas. Enzyme activity in the hepatomas was only 1 to 2 percent of that in normal liver.


Subject(s)
Carcinoma, Hepatocellular/enzymology , Liver Neoplasms/enzymology , Mitochondria, Liver/enzymology , Nucleotidyltransferases/metabolism , Adenosine Triphosphate/metabolism , Animals , Cytosine Nucleotides/metabolism , Guanosine Triphosphate/metabolism , Neoplasms, Experimental/enzymology , RNA Nucleotidyltransferases/isolation & purification , Rats , Ribonucleases/pharmacology , Tritium , Uracil Nucleotides/metabolism
4.
Mol Cell Biol ; 10(10): 5177-86, 1990 Oct.
Article in English | MEDLINE | ID: mdl-2398888

ABSTRACT

Previous studies in our laboratory have characterized a 174-base-pair (bp) enhancer sequence in the rat ribosomal DNA spacer region that exhibits all of the characteristics of a polymerase (Pol) II enhancer. Further studies showed that at least half of the enhancer activity resides in a 37-bp motif (E1) within the 174-bp spacer sequence that is located between positions -2.183 and -2.219 kilobase pairs upstream of the initiation site. To identify the factor(s) that binds specifically to the 37-bp enhancer domain, we fractionated whole-cell extract from rat adenocarcinoma ascites cells by chromatography on a series of columns, including an oligodeoxynucleotide affinity column. The final preparation contained two polypeptides of molecular weights 79,400 and 89,100 and was completely devoid of RNA Pol I activity. Electrophoretic mobility shift analysis showed that the polypeptides in the purified preparation (designated E1BF) interacted with both the enhancer element and the core promoter. To determine whether each polypeptide can separately bind to the core promoter and the enhancer, the individual components were separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, renatured, and subjected to gel retardation analysis. This experiment demonstrated that both polypeptides interacted with the two cis-acting sequences. The specificity of the binding was demonstrated by competition with unlabeled 37-bp and core promoter fragments and lack of competition with nonspecific DNAs in the mobility shift assay. The 37-bp enhancer as well as the downstream sequence of the core promoter were protected by E1BF in the DNase I footprinting assay. Addition of E1BF to limiting amounts of fraction DE-B, which contains all factors essential for Pol I-directed transcription, resulted in three- to fourfold stimulation of ribosomal DNA transcription. Comparison of molecular weights and footprinting profiles did not reveal any relationship between E1BF and other Pol I trans-acting factors.


Subject(s)
Antigens, Nuclear , DNA Helicases , DNA-Binding Proteins/isolation & purification , Enhancer Elements, Genetic , Nuclear Proteins/isolation & purification , Promoter Regions, Genetic , RNA, Ribosomal/genetics , Transcription Factors/isolation & purification , Animals , Base Sequence , Binding Sites , DNA-Binding Proteins/physiology , Gene Expression Regulation , In Vitro Techniques , Ku Autoantigen , Molecular Sequence Data , Nuclear Proteins/physiology , Oligonucleotides , Rats , Restriction Mapping , Transcription Factors/physiology , Transcription, Genetic
5.
Mol Cell Biol ; 9(4): 1435-44, 1989 Apr.
Article in English | MEDLINE | ID: mdl-2566910

ABSTRACT

To determine the role of poly(A) polymerase in 3'-end processing of mRNA, the effect of purified poly(A) polymerase antibodies on endonucleolytic cleavage and polyadenylation was studied in HeLa nuclear extracts, using adenovirus L3 pre-mRNA as the substrate. Both Mg2+- and Mn2+-dependent reactions catalyzing addition of 200 to 250 and 400 to 800 adenylic acid residues, respectively, were inhibited by the antibodies, which suggested that the two reactions were catalyzed by the same enzyme. Anti-poly(A) polymerase antibodies also inhibited the cleavage reaction when the reaction was coupled or chemically uncoupled with polyadenylation. These antibodies also prevented formation of specific complexes between the RNA substrate and components of nuclear extracts during cleavage or polyadenylation, with the concurrent appearance of another, antibody-specific complex. These studies demonstrate that (i) previously characterized poly(A) polymerase is the enzyme responsible for addition of the poly(A) tract at the correct cleavage site and probably for the elongation of poly(A) chains and (ii) the coupling of these two 3'-end processing reactions appears to result from the potential requirement of poly(A) polymerase for the cleavage reaction. The results suggest that the specific endonuclease is associated with poly(A) polymerase in a functional complex.


Subject(s)
Nucleotidyltransferases/metabolism , Polynucleotide Adenylyltransferase/metabolism , RNA Precursors/metabolism , Adenoviridae/metabolism , Antibodies , HeLa Cells/metabolism , Humans , Kinetics , Manganese/pharmacology , Poly A/metabolism , Polynucleotide Adenylyltransferase/antagonists & inhibitors , Polynucleotide Adenylyltransferase/immunology , RNA Processing, Post-Transcriptional , RNA, Messenger/metabolism , RNA, Viral/metabolism
6.
Mol Cell Biol ; 21(24): 8301-17, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11713267

ABSTRACT

Metallothionein I (MT-I) and MT-II have been implicated in the protection of cells against reactive oxygen species (ROS), heavy metals, and a variety of pathological and environmental stressors. Here, we show a robust increase in MT-I/MT-II mRNA level and MT proteins in the livers and lungs of C57BL/6 mice exposed to the influenza A/PR8 virus that infects the upper respiratory tract and lungs. Interleukin-6 (IL-6) had a pronounced effect on the induction of these genes in the liver but not the lung. Treatment of the animals with RU-486, a glucocorticoid receptor antagonist, inhibited induction of MT-I/MT-II in both liver and lung, revealing a direct role of glucocorticoid that is increased upon infection in this induction process. In vivo genomic footprinting (IVGF) analysis demonstrated involvement of almost all metal response elements, major late transcription factor/antioxidant response element (MLTF/ARE), the STAT3 binding site on the MT-I upstream promoter, and the glucocorticoid responsive element (GRE1), located upstream of the MT-II gene, in the induction process in the liver and lung. In the lung, inducible footprinting was also identified at a unique gamma interferon (IFN-gamma) response element (gamma-IRE) and at Sp1 sites. The mobility shift analysis showed activation of STAT3 and the glucocorticoid receptor in the liver and lung nuclear extracts, which was consistent with the IVGF data. Analysis of the newly synthesized mRNA for cytokines in the infected lung by real-time PCR showed a robust increase in the levels of IL-10 and IFN-gamma mRNA that can activate STAT3 and STAT1, respectively. A STAT1-containing complex that binds to the gamma-IRE in vitro was activated in the infected lung. No major change in MLTF/ARE DNA binding activity in the liver and lung occurred after infection. These results have demonstrated that MT-I and MT-II can be induced robustly in the liver and lung following experimental influenza virus infection by overlapping but distinct molecular mechanisms.


Subject(s)
Liver/metabolism , Lung/metabolism , Metallothionein/biosynthesis , Orthomyxoviridae/metabolism , Animals , Antioxidants/pharmacology , Base Sequence , Binding Sites , Blotting, Northern , Cell Nucleus/metabolism , Cytokines/biosynthesis , DNA-Binding Proteins/metabolism , Enzyme Activation , Interferon-gamma/biosynthesis , Interleukin-10/biosynthesis , Interleukin-6/metabolism , Male , Mice , Mice, Inbred C57BL , Mice, Knockout , Mifepristone/pharmacology , Models, Biological , Molecular Sequence Data , Oxidative Stress , Polymerase Chain Reaction , Promoter Regions, Genetic , RNA, Messenger/metabolism , Receptors, Glucocorticoid/antagonists & inhibitors , Receptors, Glucocorticoid/metabolism , STAT1 Transcription Factor , STAT3 Transcription Factor , Time Factors , Trans-Activators/metabolism , Transcription Factors/metabolism
7.
Public Health Action ; 7(4): 245-250, 2017 Dec 21.
Article in English | MEDLINE | ID: mdl-29584800

ABSTRACT

Setting: Four in-patient health facilities in western Uganda. Objective: To determine the impact of an innovative multi-modal quality improvement program on human immunodeficiency virus (HIV) status assessment and the impact of HIV status on severe illness conditions and mortality. Design: This was a staggered, pre-post quasi-experimental study designed to assess a multi-modal intervention (collaborative improvement meetings, audit and feedback, clinical mentoring) for improving quality of care following formal training in the management of severe illness in low-income settings. Results: From August 2014 to May 2015, 5759 patients were hospitalized, of whom 2451 (42.6%) had their HIV status assessed; 395 (16.1%) were HIV-infected. HIV-infected patients were significantly more likely to meet criteria for shock (27.5% vs. 15.1%, risk ratio [RR] 1.8, 95% confidence interval [CI] 1.7-1.9, P < 0.001) and severe respiratory distress (6.7% vs. 4.3%, RR 1.5, 95%CI 1.2-2.0, P < 0.001), and were significantly more likely to die in hospital (12.0% vs. 2.9%, RR 4.1, 95%CI 3.2-5.4, P < 0.001). There was no evidence of improved HIV status assessment during the intervention period (36.5% vs. 44.8%, +8.3%, 95%CI -8.3 to 24.8, P = 0.33). Conclusions: Hospitalized HIV-infected patients in western Uganda are at high risk for severe illness and death. Novel quality improvement strategies are needed to enhance hospital-based HIV testing in high-burden settings.


Contexte : Quatre structures de santé hospitalières dans l'ouest de l'Ouganda.Objectif : Déterminer l'impact d'un programme innovant multimodal d'amélioration de la qualité sur l'évaluation du statut du virus de l'immunodéficience humaine (VIH) et l'impact du statut VIH sur les états de maladie grave et la mortalité.Schéma : Une étude échelonnée, pré-post et quasi-expérimentale conçue pour évaluer une intervention multimodale (réunions d'amélioration concertée, audit et rétro-information, tutorat clinique) pour améliorer la qualité des soins après la formation initiale sur la prise en charge de maladies graves dans un contexte de faibles ressources.Résultats : Entre août 2014 et mai 2015, 5759 patients ont été hospitalisés : 2451 (42,6%) ont eu une évaluation de leur statut VIH et 395 (16,1%) se sont avérés infectés par le VIH. Ces derniers ont été significativement plus susceptibles de répondre à des critères de choc (27,5% contre 15,1% ; rapport de risque [RR] 1,8 ; intervalle de confiance [IC] 95% 1,7­1,9 ; P < 0,001) et de détresse respiratoire grave (6,7% contre 4,3 ; RR 1,5 ; IC95% 1,2­2,0 ; P < 0,001), et ont été significativement plus susceptibles de décéder à l'hôpital (12,0% contre 2,9% ; RR 4,1 ; IC95% 3,2­5,4 ; P < 0,001). Il n'y a pas eu d'éléments en faveur d'une amélioration de l'évaluation du statut VIH pendant la période d'intervention (36,5% contre 44,8% ; +8,3% ; IC95% −8,3 à 24,8 ; P = 0,33).Conclusions : Les patients infectés par le VIH hospitalisés dans l'ouest de l'Ouganda ont un risque élevé de maladie grave et de décès. De nouvelles stratégies d'amélioration de qualité sont requises afin d'augmenter les tests VIH en hôpital dans les contextes à fardeau élevé de maladie.


Marco de referencia: Cuatro establecimientos hospitalarios en la zona occidental de Uganda.Objetivo: Determinar la repercusión de un programa innovador multimodal de mejora de la calidad sobre la evaluación de la situación frente al virus de la inmunodeficiencia humana (VIH) y la repercusión del estado frente al VIH en materia de enfermedades graves y mortalidad.Método: Se realizó un estudio semi-experimental escalonado pre y post con el fin de evaluar una intervención multimodal (reuniones de colaboración para mejorar de la calidad, auditorías y retroalimentación, tutoría clínica) encaminada a mejorar la calidad de la atención, tras una capacitación formal sobre el manejo de las enfermedades graves en entornos con bajos ingresos.Resultados: De agosto del 2014 a mayo del 2015 se hospitalizaron 5759 pacientes; en 2451 se examinó su situación frente al VIH (42,6%) y 395 presentaban infección por el VIH (16,1%). Los pacientes afectados por el VIH exhibieron una probabilidad significativamente mayor de cumplir con los criterios diagnósticos de choque (27,5% contra 15,1%; cociente de riesgos [RR] 1,8; intervalo de confianza [IC] del 95% 1,7­1,9; P < 0,001) y de insuficiencia respiratoria grave (6,7% contra 4,3%, RR 1,5; IC95% 1,2­2,0; P < 0,001) y la probabilidad de morir en el hospital fue significativamente más alta en estos pacientes (12,0% contra 2,9%, RR 4,1; IC95% 3,2­5,4; P < 0,001). No se encontraron pruebas en favor de una mejor evaluación de la situación frente al VIH durante el período de la intervención (36,5% contra 44,8%; +8,3%; IC95% −8,3 hasta 24,8; P = 0,33).Conclusión: Los pacientes hospitalizados aquejados de infección por el VIH en Uganda occidental son muy susceptibles de sufrir una enfermedad grave o la muerte. Se precisan nuevas estrategias de mejora de la calidad que refuercen la práctica de las pruebas diagnósticas de infección por el VIH en los entornos con alta carga de morbilidad.

8.
Article in English | MEDLINE | ID: mdl-11051769

ABSTRACT

The rapid and robust induction of metallothioneins (MT)-I and II by a variety of inducers that include heavy toxic metals, reactive oxygen species, and different types of stress provide a useful system to study the molecular mechanisms of this unique induction process. The specific expression of MT-III in the brain and of MT-IV in the squamous epithelium of skin and tongue offers a unique opportunity to identify and characterize the tissue-specific factors involved in their expression. Studies using transgenic mice that overexpress MTs or MT null mice have revealed the role of MT in the protection of cells against numerous tissue-damaging agents such as reactive oxygen species. The primary physiological function of these proteins, however, remains an enigma. Considerable advances have been made in the identification of the cis-acting elements that are involved in the constitutive and induced expression of MT-I and MT-II. By contrast, only one key trans-activating factor, namely MTF-1, has been extensively characterized. Studies on the epigenetic silencing of MT-I and MT-II by promoter hypermethylation in some cancer cells have posed interesting questions concerning the functional relevance of MT gene silencing, the molecular mechanisms of MT suppression in these cells, particularly chromatin modifications, and the characteristics of the repressors.


Subject(s)
Gene Expression Regulation , Metallothionein/genetics , Metallothionein/metabolism , Animals , Cell Line , Chromatin/metabolism , Glucocorticoids/metabolism , Humans , Lipopolysaccharides/metabolism , Metallothionein/chemistry , Metals, Heavy/metabolism , Models, Genetic , Protein Isoforms , Reactive Oxygen Species , Tissue Distribution , Transcriptional Activation
9.
Cancer Res ; 54(3): 632-6, 1994 Feb 01.
Article in English | MEDLINE | ID: mdl-8306322

ABSTRACT

To elucidate the molecular mechanism by which the potent anticancer drug, 5-fluorouracil (5-FUra), inhibits cell proliferation, the effect of its metabolite, 5-fluorouridine triphosphate, on transcription of rat rRNA gene and processing of pre-rRNA was investigated in S-100 extract from the mouse lymphosarcoma cells. The in vitro processing of pre-rRNA substrate synthesized from the T3 promoter occurred at the correct primary processing site. Replacement of UMP with 5-fluorouridine monophosphate in the rRNA substrate did not affect the pre-rRNA processing. Similar result was obtained when coupled transcription-processing was studied. When the coupled reaction was examined using extracts from the cells treated with 5-FUra, rRNA processing was abolished whereas transcription of rRNA gene was unaffected. Treatment of cells with thymidine along with 5-FUra did not reverse the inhibitory effect of the drug on rRNA processing. In contrast to the effect on rRNA processing, treatment of cells with 5-FUra did not impede the 3' end processing of pre-mRNA. These data show that inhibition of pre-rRNA processing is a major mechanism of action of 5-FUra and suggest that the activity and/or synthesis of a trans-acting factor(s) involved in this reaction is altered by the anticancer drug.


Subject(s)
Fluorouracil/pharmacology , Lymphoma, Non-Hodgkin/drug therapy , Lymphoma, Non-Hodgkin/genetics , RNA Precursors/drug effects , RNA Precursors/genetics , RNA, Ribosomal/drug effects , RNA, Ribosomal/genetics , Animals , Base Sequence , Cell Division/drug effects , Cell Division/physiology , Cell Nucleus/chemistry , Cell Nucleus/drug effects , Cell Nucleus/physiology , DNA, Ribosomal/drug effects , DNA, Ribosomal/genetics , Fluorouracil/metabolism , Lymphoma, Non-Hodgkin/metabolism , Mice , Molecular Sequence Data , RNA Precursors/physiology , RNA, Neoplasm/metabolism , RNA, Ribosomal/physiology , Trans-Activators/biosynthesis , Transcription, Genetic/drug effects , Tumor Cells, Cultured/drug effects , Uracil Nucleotides/metabolism , Uracil Nucleotides/pharmacology , Uridine Triphosphate/analogs & derivatives , Uridine Triphosphate/pharmacology
10.
Cancer Res ; 49(11): 2827-33, 1989 Jun 01.
Article in English | MEDLINE | ID: mdl-2541894

ABSTRACT

Two structurally and immunologically distinct species of nuclear polyadenylate [poly(A)] polymerases have been characterized. One of these enzymes is relatively absent in normal tissues but is predominant in primary and transplanted tumors and transformed cell lines. The presence of the tumor type enzyme in fetal liver, but not in regenerating liver, suggests that it is an oncofetal protein. Antibodies against the tumor-type poly(A) polymerases are present in the sera of rats bearing tumors and in some cancer patients. These antibodies are also found in the sera of rats fed hepatocarcinogen even before preneoplastic nodules were visible, which suggests that elicitation of these antibodies is an early event in neoplastic transformation. Autoantibodies against both liver-type and tumor-type poly(A) polymerase are also present in some rheumatic autoimmune sera. Polyclonal antibodies against purified enzyme from a rat hepatoma, which exhibit a single band upon immunoblot analysis, were used in cell-free extracts to study the role of poly(A) polymerase in the 3'-end processing of pre-mRNA. These studies showed that the antibodies blocked both endonucleolytic cleavage and poly(A) addition at the cleavage site and complex formation between factors in the extract and pre-mRNA. Independent studies in other laboratories have demonstrated that both the cleavage and poly(A) polymerase activities require the same component for their function. These observations suggest that both cleavage and polyadenylation reactions are tightly coupled in a functional complex.


Subject(s)
Nucleotidyltransferases/physiology , Polynucleotide Adenylyltransferase/physiology , RNA, Messenger/biosynthesis , RNA, Neoplasm/biosynthesis , Transcription, Genetic , Animals , Antibodies, Antinuclear/analysis , Antibodies, Neoplasm/analysis , Antigens, Neoplasm/immunology , Autoantibodies/immunology , Base Sequence , Chemical Phenomena , Chemistry , Liver Neoplasms, Experimental/immunology , Molecular Weight , Organ Specificity , Polynucleotide Adenylyltransferase/analysis , Polynucleotide Adenylyltransferase/immunology , Polynucleotide Adenylyltransferase/metabolism , Rheumatic Diseases/immunology
11.
Oncogene ; 16(11): 1475-86, 1998 Mar.
Article in English | MEDLINE | ID: mdl-9525746

ABSTRACT

We have previously purified and characterized a rat liver protein C'BP-1 that is either identical or closely related to C/EBPdelta (Aniskovitch and Jacob, 1997). The mouse metallothionein-I (MT-I) promoter contains two C'BP-1 binding sites, one of which includes the MRE-c' region (-135 to -110). The C'BP-1 binding activity was detected by EMSA as a major activity for MRE-c' in nonproliferating adult liver cells but not in rat hepatoma cells. In this study, we purified and characterized a factor, C'BP-2, which had a dominant binding activity for MRE-c' in Morris hepatoma 3924A, a poorly differentiated, fast-growing tissue. C'BP-2 is a 28 kDa protein which exists in solution as a monomer. As observed for C'BP-1, affinity-purified C'BP-2 stimulated transcription from the mMT-I gene promoter. DNase I footprinting revealed two C'BP-2 binding sites in the regions that overlap with the CCAAT homologies of the C'BP-1 binding sites on the mMT-I promoter. C'BP-2 made essential contacts with the CCAAT homology and in the region upstream of this sequence. Competition electrophoretic mobility shift assay and methylation interference analysis revealed that C'BP-2 is a protein closely related, but not identical, to CP2. These data suggest that C'BP-1 and C'BP-2 may play a role in hepatocyte proliferation and/or differentiation.


Subject(s)
DNA-Binding Proteins/metabolism , Metallothionein/genetics , Nuclear Proteins/metabolism , Promoter Regions, Genetic , Transcriptional Activation , Animals , CCAAT-Enhancer-Binding Proteins , Chromatography, DEAE-Cellulose , DNA-Binding Proteins/isolation & purification , Electrophoresis, Polyacrylamide Gel , Liver Neoplasms, Experimental/metabolism , Liver Neoplasms, Experimental/pathology , Nuclear Proteins/isolation & purification , Protein Binding , Rats
12.
Oncogene ; 18(46): 6287-95, 1999 Nov 04.
Article in English | MEDLINE | ID: mdl-10597227

ABSTRACT

Metallothionein-I (MT-I) gene is silenced by methylation of CpG islands in mouse lymphosarcoma P1798 cells but not in the thymus, the cell type from which the tumor was derived. Bisulfite genomic sequencing revealed that all 21 CpG dinucleotides present within -216 bp to +1 bp with respect to transcription start site are methylated in the tumor cell line, but none is methylated in the thymus. The lymphosarcoma cells induced MT-I in response to heavy metals only after demethylation with 5-azacytidine (5-AsaC). The electrophoretic mobility shift assay using specific oligonucleotide probes showed that the key transcription factors regulating MT-I gene (e.g., MTF-1, Sp 1 and MLTF/USF) are active in P1798 cells. In vivo footprinting of the proximal promoter region showed that none of the metal regulatory elements (MREs) or MLTF/USF are occupied in response to heavy metals. Demethylation of the lymphosarcoma cells with 5-AzaC resulted in constitutive footprinting at MLTF/ARE, and zinc-inducible footprinting at MRE-c, MRE-d and MRE-e sites. Demethylation of just 10-20% of the CpG islands was sufficient to render the gene inducible by cadmium or zinc. The MT-I induction persisted in the cancer cells for several generations even after withdrawal of 5-AzaC from the culture medium.


Subject(s)
Gene Expression Regulation, Neoplastic , Gene Silencing , Lymphoma, Non-Hodgkin/pathology , Metallothionein/genetics , Neoplasm Proteins/genetics , Animals , Antimetabolites, Antineoplastic/pharmacology , Azacitidine/pharmacology , Base Sequence , CpG Islands , DNA Footprinting , DNA Methylation , DNA, Neoplasm/genetics , Gene Expression Regulation, Neoplastic/drug effects , Lymphoma, Non-Hodgkin/metabolism , Metallothionein/biosynthesis , Metals, Heavy/pharmacology , Mice , Molecular Sequence Data , Neoplasm Proteins/biosynthesis , Promoter Regions, Genetic , Regulatory Sequences, Nucleic Acid , Thymus Gland/metabolism , Transcription Factors/metabolism , Tumor Cells, Cultured/drug effects
13.
Oncogene ; 14(5): 589-94, 1997 Feb 06.
Article in English | MEDLINE | ID: mdl-9053857

ABSTRACT

We have previously demonstrated that the core promoter of rat ribosomal RNA gene (rDNA) contains an E-box-like sequence to which the core promoter binding factor CPBF binds and that the 44 kDa subunit of this protein is immunologically related to USF1, the helix--loop--helix-zipper DNA binding protein. Further, we showed that RNA polymerase I (pol I) transcription in vitro is competed by oligonucleotides containing USF-binding site, which suggested a key role for USF in rDNA transcription. To prove the potential role of USF in pol I transcription in vivo, USF1 and USF2 homodimers and USF1/USF2 heterodimer were overexpressed in CHO cells by transfection of the respective cDNAs. Co-transfection of a plasmid containing rDNA followed by primer extension analysis showed that overexpression of USF1 and USF2 as homodimers resulted in inhibition of rDNA transcription by as much as 85-90% whereas overexpression of USF1/USF2 in the heterodimeric form activated transcription approximately 3.5-fold. Transfection of mutant USF2 cDNA that is devoid of the basic DNA-binding domain produced only minimal inhibition of rDNA transcription. These data show that USF can modulate transcription of rRNA gene in vivo by functioning as a repressor (homodimer) or activator (heterodimer) of pol I transcription in vivo and suggest that inhibition of rDNA transcription may be responsible for the antiproliferative action of USF homodimers.


Subject(s)
DNA, Ribosomal/biosynthesis , DNA, Ribosomal/metabolism , DNA-Binding Proteins , Helix-Loop-Helix Motifs , Transcription Factors/metabolism , Transcription, Genetic , Animals , CHO Cells , Cricetinae , Dimerization , Genes, Reporter , Rats , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/metabolism , Transcription Factors/biosynthesis , Transcription Factors/chemistry , Transfection , Upstream Stimulatory Factors , beta-Galactosidase/biosynthesis
14.
Biochim Biophys Acta ; 425(1): 125-8, 1976 Feb 18.
Article in English | MEDLINE | ID: mdl-1247614

ABSTRACT

Spermine stimulates activities of higherly purified rat liver nuclear RNA olymerases I, II and III 3 to 4 fold. Inclusion of (NH4)2SO4 at concentrations required for maximal enzyme activities does not significantly enhance the degree of stimulation of polymerase activities by spermine, but maintains the stimulatory levels of enzymes over a broader range of spermine concentrations. The stimulatory effect of spermine at a concentration of 1 mM is a useful method for the elevation of activities of all RNA polymerases and thus provides a means to measure these enzymes when extracted from small quantities of tissues or cells. Based on the differential stimulation of the polymerases by spermine, a higher concentration of spermine (5 mM) can be selected to inhibit RNA polymerase I specifically.


Subject(s)
Cell Nucleus/enzymology , DNA-Directed RNA Polymerases/metabolism , Liver/enzymology , Spermine/pharmacology , Animals , Cell Nucleus/drug effects , DNA-Directed RNA Polymerases/antagonists & inhibitors , DNA-Directed RNA Polymerases/isolation & purification , Enzyme Activation/drug effects , Liver/drug effects , Rats
15.
Biochim Biophys Acta ; 563(1): 150-4, 1979 Jun 20.
Article in English | MEDLINE | ID: mdl-497205

ABSTRACT

Although cordycepin 5'-triphosphate (3'-dATP), at low concentrations, preferentially inhibits chromatin-associated poly(A) synthesis in isolated nuclei, higher levels of the inhibitor prevent both rRNA (RNA polymerase I activity) and hnRNA (RNA polymerase II activity) synthesis in vitro (Rose, K.M., Bell, L.E. and Jacob, S.T. (1977) Nature 267, 178-180). The present studies demonstrate that this nucleotide can also inhibit tRNA and 5 S RNA synthesis (RNA polymerase III activity). At 50-200 microgram/ml, 3'-dATP inhibits incorporation of [3H]UTP into tRNA and 5 S RNA by approximately 65%, whereas the syntheses of these RNAs were completely blocked when [3H]GTP was used as the substrate. These data suggest the formation of poly(U) in the tRNA and 5 S RNA regions, which is resistant to 3'-dATP. In contrast, another ATP analog, Ara-ATP, which selectively inhibits poly(A) synthesis, does not block tRNA and 5 S RNA synthesis in isolated nuclei. The production of these RNA species in isolated nuclei is also insensitive to Ara-CTP and 2'-dATP. These data suggest that 3'-dATP exerts general inhibitory effects on RNA synthesis and further substantiate the conclusion that Ara-ATP is a selective inhibitor of the polyadenylation reaction in vitro.


Subject(s)
Arabinonucleotides/pharmacology , Deoxyadenine Nucleotides/pharmacology , RNA, Transfer/biosynthesis , RNA/biosynthesis , Vidarabine/analogs & derivatives , Animals , Cell Nucleus/drug effects , Cell Nucleus/metabolism , In Vitro Techniques , Liver/metabolism , Rats , Vidarabine Phosphate/analogs & derivatives
16.
Biochim Biophys Acta ; 432(1): 60-72, 1976 Apr 15.
Article in English | MEDLINE | ID: mdl-177077

ABSTRACT

DNA-dependent RNA polymerases were extracted from the nuclei of poorly differentiated tumor, Morris hepatoma 3924A, and purified by an initial chromatography on a DEAE-Sephadex column followed by fractionation on phosphocellulose and finally on a second DEAE-Sephadex column. Three major forms of RNA polymerase (IA, IB and II) were resolved chromatographically. Enzymes IA, IB and II eluted from DEAE-Sephadex at 75, 150 and 210 mM (NH4)2SO4, respectively. The specific activities (nmol UMP incorporated mg protein per 15 min) of polymerases IA, IB and II were 40, 43 and 182, respectively. Concurrently, DNA-dependent RNA polymerases were extracted from normal liver and subjected to similar chromatographic procedure. Upon the final DEAE-Sephadex chromatography, enzymes IA, IB and II eluted at 110, 180 and 210 mM (NH4)2SO4, respectively. The recovery of polymerases IA, IB and II after purification was 0.21, 0,28 and 0.42 unit/mg DNA, respectively, for hepatoma enzymes and 0.07, 0.05 and 0.42 unit/mg DNA for the corresponding liver enzymes.


Subject(s)
Carcinoma, Hepatocellular/enzymology , DNA-Directed RNA Polymerases/metabolism , Liver Neoplasms/enzymology , Liver/enzymology , Ammonium Sulfate/pharmacology , Animals , DNA-Directed RNA Polymerases/isolation & purification , Enzyme Activation/drug effects , Kinetics , Neoplasms, Experimental/enzymology , Rats , Spermine/pharmacology , Templates, Genetic
17.
Biochim Biophys Acta ; 418(3): 330-43, 1976 Feb 05.
Article in English | MEDLINE | ID: mdl-174726

ABSTRACT

Intranuclear accumulation of testosterone was compared with early changes in transcriptional events in kidneys from normal female and androgen-insensitive (tfm/y) mice. Following a subcutaneous injection of [3H] testosterone, total nuclear uptake of the steroid was maximal at 30 min and declined to about 40% of the peak value by 4 h after hormone administration. After a single subcutaneous dose of testosterone, RNA polymerase activity assayed in intact nuclei in the presence of Mg2+ and alpha-amanitin (nucleolar RNA polymerase I), as well as the enzyme activity sensitive to low concentration of the toxin (nucleoplasmic RNA polymerase II), increased within 15 min and attained peak values at 2 and 1 h, respectively. The activity of both polymerases declined almost to the control level by 4 h and then increased again with a second peak at 20 and 12 h for RNA polymerase I and II, respectively. Similarly, the template capacity of mouse kidney chromatin, as measured with mammalian RNA polymerase II, increased by 15 min, reached a peak at 1 h and returned to control level by 4 h following hormone treatment. A second dose of testosterone given at the nadir (4 h) was not capable of stimulating renal chromatin template activity significantly as compared to the effect observed after the initial hormone treatment. Contrary to the testosterone-stimulated changes in transcriptional events observed in normal female mice, androgens elicited no response in androgen-insensitive tfm/y mice, animals lacking cytosol androgen receptors. These results strongly support the contention that hormone-specific receptors are obligatory to steroid-mediated modifications in gene transcription.


Subject(s)
Chromatin/metabolism , DNA-Directed RNA Polymerases/metabolism , Kidney/metabolism , Testosterone/pharmacology , Amanitins/pharmacology , Animals , Binding Sites , Cell Nucleus/metabolism , Kidney/drug effects , Kinetics , Magnesium/pharmacology , Manganese/pharmacology , Mice , Mice, Inbred C57BL , Mutation , Protein Binding , Receptors, Cell Surface , Templates, Genetic , Testosterone/metabolism , Transcription, Genetic/drug effects
18.
Biochim Biophys Acta ; 475(3): 548-52, 1977 Apr 04.
Article in English | MEDLINE | ID: mdl-300631

ABSTRACT

The effect of cordycepin 5'-triphosphate on poly(A) synthesis was investigated in isolated rat hepatic nuclei. Nuclei were incubated in the absence and presence of exogenous primer in order to distinguish the chromatin-associated poly(A) polymerase from the "free" enzyme (Jacob, S.T., Roe, F.J. and Rose, K.M. (1976) Biochem. J. 153, 733--735). The chromatin-bound enzyme, which adds adenylate residues onto the endogenous RNA, was selectively inhibited at low concentrations of cordycepin 5'-triphosphate, 50% inhibition being achieved at 2microng/ml. At least 80 times more inhibitor was required for 50% reduction in the "free" nuclear poly(A) polymerase activity. Inhibition of DNA-dependent RNA synthesis also required higher concentrations of the nucleotide analogue. These data not only offer a mechanism for the selective inhibition of initial polyadenylation of heterogeneous nuclear RNA in vivo by cordycepin, but also provide a satisfactory explanation for the indiscriminate effect of the inhibitor on partially purified or "free" poly(A) and RNA polymerases.


Subject(s)
Adenine Nucleotides/pharmacology , Cell Nucleus/metabolism , Liver/metabolism , Poly A/metabolism , Animals , Cell Nucleus/drug effects , DNA-Directed RNA Polymerases/antagonists & inhibitors , Deoxyadenosines/pharmacology , Dose-Response Relationship, Drug , Liver/drug effects , Polynucleotide Adenylyltransferase/antagonists & inhibitors , RNA/biosynthesis , Rats
19.
Mol Endocrinol ; 3(11): 1861-8, 1989 Nov.
Article in English | MEDLINE | ID: mdl-2608060

ABSTRACT

An in vitro transcription system was developed from H411EC3 (H4) hepatoma cells, which mimics the in vivo up-regulation by glucocorticoid hormones on ribosomal RNA (rRNA) synthesis. Ribosomal DNA (rDNA) transcription in extracts derived from H4 cells grown in the presence of 100 nM triamcinolone acetonide was 4- to 5-fold greater than that in extracts derived from cells grown in the absence of glucocorticoid. This effect was not a general stimulation by the steroid, as RNA polymerase II transcription of the metallothionein-1 gene which lacked a glucocorticoid responsive element was unaffected. The increased transcription in hormone-treated extracts was also independent of differential ribonuclease activities or inhibitors as ascertained by the inclusion of ribonuclease inhibitor and mixing experiments, respectively. Chromatography of H4 cell extracts on heparin-sepharose followed by transcription complementation analysis, showed that the hormone-induced stimulatory activity eluted with the fraction (TFIA) which contains RNA polymerase I (Pol I). Immunoblot analysis with specific anti-Pol I antibody showed similar subunit profiles in the absence and presence of the hormone. The presence of a Pol I enhancer element in addition to the rDNA promoter did not further modify the glucocorticoid-induced transcription. These results indicate that the glucocorticoid-mediated effects could be observed in cell extracts which accurately initiate transcription of cloned rat rDNA. Moreover, the alterations of rDNA transcription by the hormone is effected by a factor which elutes with fraction TFIA.


Subject(s)
Gene Expression Regulation, Neoplastic/drug effects , Liver Neoplasms, Experimental/genetics , Neoplasm Proteins/metabolism , RNA Polymerase I/metabolism , RNA, Neoplasm/genetics , RNA, Ribosomal/genetics , Transcription, Genetic/drug effects , Triamcinolone Acetonide/pharmacology , Animals , Cell-Free System , Liver Neoplasms, Experimental/pathology , RNA, Neoplasm/biosynthesis , RNA, Ribosomal/biosynthesis , Rats , Transcription Factors/metabolism , Tumor Cells, Cultured/drug effects , Tumor Cells, Cultured/metabolism
20.
Leukemia ; 29(6): 1350-9, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25482129

ABSTRACT

The gene encoding PTPROt (truncated isoform of protein tyrosine phosphatase receptor-type O) is methylated and suppressed in chronic lymphocytic leukemia (CLL). PTPROt exhibits in vitro tumor-suppressor characteristics through the regulation of B-cell receptor (BCR) signaling. Here we generated transgenic (Tg) mice with B-cell-specific expression of PTPROt. Although lymphocyte development is normal in these mice, crossing them with TCL1 Tg mouse model of CLL results in a survival advantage compared with the TCL1 Tg mice. Gene expression profiling of splenic B-lymphocytes before detectable signs of CLL followed by Ingenuity Pathway Analysis revealed that the most prominently regulated functions in TCL1 Tg vs non-transgenic (NTg) and TCL1 Tg vs PTPROt/TCL1 double Tg are the same and also biologically relevant to this study. Further, enhanced expression of the chemokine Ccl3, the oncogenic transcription factor Foxm1 and its targets in TCL1 Tg mice were significantly suppressed in the double Tg mice, suggesting a protective function of PTPROt against leukemogenesis. This study also showed that PTPROt-mediated regulation of Foxm1 involves activation of p53, a transcriptional repressor of Foxm1, which is facilitated through suppression of BCR signaling. These results establish the in vivo tumor-suppressive function of PTPROt and identify p53/Foxm1 axis as a key downstream effect of PTPROt-mediated suppression of BCR signaling.


Subject(s)
Biomarkers, Tumor/metabolism , Disease Models, Animal , Forkhead Transcription Factors/metabolism , Inflammation/prevention & control , Leukemia, Lymphocytic, Chronic, B-Cell/prevention & control , Receptor-Like Protein Tyrosine Phosphatases, Class 3/physiology , Tumor Suppressor Protein p53/metabolism , Animals , B-Lymphocytes/metabolism , B-Lymphocytes/pathology , Biomarkers, Tumor/genetics , Blotting, Western , Cells, Cultured , Female , Flow Cytometry , Forkhead Box Protein M1 , Forkhead Transcription Factors/genetics , Gene Expression Profiling , Gene Expression Regulation, Leukemic , Humans , Inflammation/genetics , Inflammation/pathology , Leukemia, Lymphocytic, Chronic, B-Cell/genetics , Leukemia, Lymphocytic, Chronic, B-Cell/pathology , Male , Mice , Mice, Inbred C57BL , Mice, Transgenic , Oligonucleotide Array Sequence Analysis , Phenotype , Proto-Oncogene Proteins/physiology , Proto-Oncogene Proteins c-bcr/genetics , Proto-Oncogene Proteins c-bcr/metabolism , RNA, Messenger/genetics , Real-Time Polymerase Chain Reaction , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction , Tumor Suppressor Protein p53/genetics
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