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1.
Mycorrhiza ; 34(3): 159-171, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38625427

RESUMO

Climate change and global warming have contributed to increase terrestrial drought, causing negative impacts on agricultural production. Drought stress may be addressed using novel agronomic practices and beneficial soil microorganisms, such as arbuscular mycorrhizal fungi (AMF), able to enhance plant use efficiency of soil resources and water and increase plant antioxidant defence systems. Specific traits functional to plant resilience improvement in dry conditions could have developed in AMF growing in association with xerophytic plants in maritime sand dunes, a drought-stressed and low-fertility environment. The most studied of such plants are European beachgrass (Ammophila arenaria Link), native to Europe and the Mediterranean basin, and American beachgrass (Ammophila breviligulata Fern.), found in North America. Given the critical role of AMF for the survival of these beachgrasses, knowledge of the composition of AMF communities colonizing their roots and rhizospheres and their distribution worldwide is fundamental for the location and isolation of native AMF as potential candidates to be tested for promoting crop growth and resilience under climate change. This review provides quantitative and qualitative data on the occurrence of AMF communities of A. arenaria and A. breviligulata growing in European, Mediterranean basin and North American maritime sand dunes, as detected by morphological studies, trap culture isolation and molecular methods, and reports on their symbiotic performance. Moreover, the review indicates the dominant AMF species associated with the two Ammophila species and the common species to be further studied to assess possible specific traits increasing their host plants resilience toward drought stress under climate change.


Assuntos
Mudança Climática , Micorrizas , Simbiose , Micorrizas/fisiologia , Europa (Continente) , América do Norte , Microbiologia do Solo , Secas , Areia/microbiologia
2.
Arch Microbiol ; 204(5): 276, 2022 Apr 22.
Artigo em Inglês | MEDLINE | ID: mdl-35460040

RESUMO

A Gram-negative, aerobic, motile, rod-shaped bacterium, designated strain CAU 1594T, was isolated from a coastal sand sample collected in the Republic of Korea. Cells of strain CAU 1594T grew best at 30 °C, pH 7.5, and in the presence of 1% (w/v) NaCl. Phylogenetic analysis, based on 16S rRNA gene sequencing, indicated that strain CAU 1594T was affiliated with the genus Marinobacterium and most similar to Marinobacterium jannaschii ATCC 27135T (95.1%) and Marinobacterium stanieri ATCC 27130T (94.9%). The whole genome of strain CAU 1594T was 4,917,683 bp, including 4,188 CDSs, with a 60.4 mol% G + C content. Based on draft genome sequences, the average nucleotide identity and digital DNA-DNA hybridization values of strain CAU 1594T were within the ranges of 71.9-73.1% and 20.0-2.1%, respectively, compared to reference strains. The major respiratory quinone was ubiquinone-8, and the major fatty acids were C16:0, summed feature 3 (C16:1 ω6c and C16:1 ω7c), and summed feature 8 (C18:1 ω6c and C18:1 ω7c). The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine. Based on these results, strain CAU 1594T represents a novel species of the genus Marinobacterium, for which the name Marinobacterium arenosum sp. nov. is proposed. The type strain is CAU 1594T (=KCTC 82405T=MCCC 1K05672T).


Assuntos
Alteromonadaceae , Areia , Técnicas de Tipagem Bacteriana , DNA Bacteriano/genética , Ácidos Graxos/análise , Fosfolipídeos/análise , Filogenia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Ubiquinona/química
3.
Int J Syst Evol Microbiol ; 72(10)2022 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-36268856

RESUMO

A Gram-positive, rod-shaped, motile, spore-forming bacterium, designated strain IB182496T, was isolated from coastal sand of the South China Sea. The strain grew optimally at pH 7.0-9.0, 20-30 °C, and with NaCl 3.0-5.0 %. The predominant menaquinone was MK-7 and the major cellular fatty acids were anteiso-C15 : 0, iso-C16 : 0 and C16 : 0. The polar lipids in the cell wall included diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, three unidentified phospholipids and one unidentified lipid. The comparison of 16S rRNA gene sequences indicated that strain IB182496T was most closely related to 'Paenibacillus sambharensis' SMB1 and Paenibacillus tarimensis SA-7-6T with similarities of 95.7 and 95.5 %, respectively. The whole-genome average nucleotide identity values between strain IB182496T and the two reference strains were 70.8 and 70.5%, and the digital DNA-DNA hybridization values were 18.7 and 18.0 %, respectively. Genomic analyses showed that strain IB182496T presented a genome of 6.22 Mbp with chromosomal G+C content of 60.3 %, and a total of 5261 genes were predicted. The combined phylogenetic relatedness, phenotypic and genotypic features supported the conclusion that strain IB182496T should be considered as representing a novel species of the genus Paenibacillus, for which we propose the name Paenibacillus sabuli sp. nov. with the type strain IB182496T (=MCCC 1K04627T=JCM 34216T).


Assuntos
DNA Bacteriano , Paenibacillus , RNA Ribossômico 16S/genética , Filogenia , Fosfatidiletanolaminas/metabolismo , Composição de Bases , Cloreto de Sódio , Vitamina K 2/química , Areia , Cardiolipinas , DNA Bacteriano/genética , Técnicas de Tipagem Bacteriana , Ácidos Graxos/química , Análise de Sequência de DNA , Fosfolipídeos/química , Nucleotídeos
4.
Antonie Van Leeuwenhoek ; 114(2): 151-159, 2021 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-33449223

RESUMO

An aerobic, Gram-negative, non-motile, non-spore-forming, rod-shaped, and pale yellow-colored bacterial strain, designated TS118T, was isolated from a sand sample obtained from a coastal sand dune after exposure to 3 kGy of gamma radiation. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the isolate was a member of the genus Spirosoma and most closely related to Spirosoma metallicum PR1014kT (95.1% similarity). The genome of strain TS118T is constituted by one chromosome (5,691,492 bp) and one plasmid (28,440 bp) and has a G + C content of 52.7%. The genome contains 4641 protein coding sequences (CDSs), 38 tRNAs, and 11 rRNAs. The predominant fatty acids of strain TS118T were C16:1 ω5c, iso-C15:0, C16:0, summed feature 3 (C16:1 ω6c and/or C16:1 ω7c), and iso-C17:0 3-OH. The major polar lipids were phosphatidylethanolamine, an unidentified amino lipid and an unidentified aminophospholipid. The main respiratory quinone was menaquinone-7 (MK-7). The novel strain showed resistance to gamma radiation with a D10 value (i.e., the dose required to reduce the bacterial population by tenfold) of 4.3 kGy. Based on the phylogenetic, physiological, and chemotaxonomic characteristics, strain TS118T represents a novel species, for which the name Spirosoma taeanense sp. nov. is proposed. The type strain is TS118T (=KCTC 72898T =JCM 34024T).


Assuntos
Areia , Microbiologia do Solo , Técnicas de Tipagem Bacteriana , Composição de Bases , Cytophagaceae , DNA Bacteriano/genética , Ácidos Graxos/análise , Fosfolipídeos/análise , Filogenia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Vitamina K 2
5.
Antonie Van Leeuwenhoek ; 114(10): 1585-1593, 2021 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-34292424

RESUMO

An aerobic, Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, and light pink-colored bacterial strain, designated TS19T, was isolated from a sand sample obtained from a coastal sand dune after exposure to 3 kGy of gamma radiation. Phylogenetic analysis based on the 16S rRNA gene sequences revealed that the isolate was a member of the genus Hymenobacter and was most closely related to H. wooponensis WM78T (98.3% similarity). Strain TS19T and H. wooponensis showed resistance to gamma radiation with D10 values (i.e., the dose required to reduce the bacterial population by tenfold) of 7.3 kGy and 3.5 kGy, respectively. The genome of strain TS19T consists of one contig with 4,879,662 bp and has a G + C content of 56.2%. The genome contains 3,955 protein coding sequences, 44 tRNAs, and 12 rRNAs. The predominant fatty acids of strain TS19T were iso-C15:0, summed feature 4 (iso-C17:1 I and/or anteiso-C17:1 B), summed feature 3 (C16:1 ω6c and/or C16:1 ω7c), and C16:1 ω5c. The major polar lipids were phosphatidylethanolamine, and one unidentified aminophospholipid. The main respiratory quinone was menaquinone-7. Based on the phylogenetic, physiological, and chemotaxonomic characteristics, strain TS19T represents a novel species, for which the name Hymenobacter taeanensis sp. nov. is proposed. The type strain is TS19T (= KCTC 72897T = JCM 34023T).


Assuntos
Cytophagaceae , Areia , Técnicas de Tipagem Bacteriana , Cytophagaceae/genética , DNA Bacteriano/genética , Ácidos Graxos/análise , Filogenia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Vitamina K 2
6.
Int J Syst Evol Microbiol ; 70(12): 6323-6330, 2020 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-33119482

RESUMO

A Gram-stain-negative, non-pigmented, non-spore-forming, motile, strictly aerobic bacterial strain, designated CAU 1492T, was isolated from a coastal sand dune and its taxonomic position was examined using a polyphasic approach. Cells of strain CAU 1492T grew optimally at 30 °C, pH 7.0 and in 3 % (w/v) NaCl. Phylogenetic analysis based on the 16S rRNA gene sequence of CAU 1492T showed that it formed a distinct lineage within the family Rhodobacteraceae as a separate deep branch, with 96.8 % or lower sequence similarity values to representatives of the genera Marivita, Donghicola, Sulfitobacter, Marinovum, Phaeobacter, Primorskyibacter, Roseovarius and Aestuariihabitans. Strain CAU 1492T was closely related to Marivita geojedonensis DPG-138T (96.8 %), Donghicola eburneus SW-277T (96.7 %), Sulfitobacter porphyrae SCM-1T (96.7 %), Marinovum algicola FF3T (96.6 %) and Aestuariihabitans beolgyonensis BB-MW15T (96.4 %) based on 16S rRNA gene sequences. The major cellular fatty acids of strain CAU 1492T were cyclo-C19 : 0 ω8c and summed feature 8 (C18 : 1 ω7c/C18 : 1 ω6c). The polar lipid pattern was composed of phosphatidylglycerol, phosphatidylethanolamine, an unidentified phospholipid and an unidentified aminolipid. The strain contained Q-10 as the sole respiratory quinone. The draft genome of strain CAU 1492T was 4.63 Mb with a DNA G+C content of 63.1 mol%. The genome includes 4292 protein-coding genes and a five rRNA operons. On the basis of the phenotypic, chemotaxonomic and genomic data, strain CAU 1492T represents a novel genus in the family Rhodobacteraceae for which the name Arenibacterium halophilum gen. nov., sp. nov. is proposed. The type strain of Arenibacterium halophilum is CAU 1492T (=KCTC 62998T=NBRC 113696T).


Assuntos
Filogenia , Rhodobacteraceae/classificação , Areia/microbiologia , Técnicas de Tipagem Bacteriana , Composição de Bases , DNA Bacteriano/genética , Ácidos Graxos/química , RNA Ribossômico 16S/genética , Rhodobacteraceae/genética , Água do Mar/microbiologia , Análise de Sequência de DNA , Especificidade da Espécie
7.
Microb Ecol ; 77(1): 217-229, 2019 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-29926147

RESUMO

Early successional biological soil crusts (BSCs), a consortium of bacteria, cyanobacteria, and other microalgae, are one of the first settlement stages on temperate coastal sand dunes. In this study, we investigated the algal biomass (Chlorophyll a (Chl a)), algal (Calgal) and microbial carbon (Cmic), elemental stoichiometry (C:N:P), and acid and alkaline phosphatase activity (AcidPA and AlkPA) of two algae-dominated BSCs from a coastal white dune (northeast Germany, on the southwestern Baltic Sea) which differed in the exposure to wind forces. The dune sediment (DS) was generally low in total carbon (TC), nitrogen (TN), and phosphorus (TP). These elements, together with the soil organic matter (SOM) accumulated in the BSC layer and in the sediment underneath (crust sediment CS), leading to initial soil development. The more disturbed BSC (BSC1) exhibited lower algal and microbial biomass and lower Calgal/Cmic ratios than the undisturbed BSC (BSC2). The BSC1 accumulated more organic carbon (OC) than BSC2. However, the OC in the BSC2 was more effectively incorporated into Cmic than in the BSC1, as indicated by lower OC:Cmic ratios. The AcidPA (1.1-1.3 µmol g-1 DM h-1 or 147-178 µg g-1 DM h-1) and AlkPA (2.7-5.5 µmol g-1 DM h-1 or 372-764 µg g-1 DM h-1) were low in both BSCs. The PA, together with the elemental stoichiometry, indicated no P limitation of both BSCs but rather water limitation followed by N limitation for the algae community and a carbon limitation for the microbial community. Our results explain the observed distribution of early successional and more developed BSCs on the sand dune.


Assuntos
Monoéster Fosfórico Hidrolases/metabolismo , Dióxido de Silício/análise , Microbiologia do Solo , Solo/química , Países Bálticos , Biomassa , Carbono , Clorofila A , Sedimentos Geológicos/química , Alemanha , Microbiota , Nitrogênio , Fósforo , Estações do Ano , Água
8.
Appl Environ Microbiol ; 83(14)2017 07 15.
Artigo em Inglês | MEDLINE | ID: mdl-28500038

RESUMO

Nitrite-oxidizing bacteria (NOB) are responsible for the second step of nitrification in natural and engineered ecosystems. The recently discovered genus Nitrotoga belongs to the Betaproteobacteria and potentially has high environmental importance. Although environmental clones affiliated with Nitrotoga are widely distributed, the limited number of cultivated Nitrotoga spp. results in a poor understanding of their ecophysiological features. In this study, we successfully enriched the nonmarine cold-adapted Nitrotoga sp. strain AM1 from coastal sand in an eelgrass zone and investigated its physiological characteristics. Multistep-enrichment approaches led to an increase in the abundance of AM1 to approximately 80% of the total bacterial population. AM1 was the only detectable NOB in the bacterial community. The 16S rRNA gene sequence of AM1 was 99.6% identical to that of "Candidatus Nitrotoga arctica," which was enriched from permafrost-affected soil. The highest nitrogen oxidation rate of AM1 was observed at 16°C. The half-saturation constant (Km ) and the generation time were determined to be 25 µM NO2- and 54 h, respectively. The nitrite oxidation rate of AM1 was stimulated at concentrations of <30 mM NH4Cl but completely inhibited at 50 mM NH4Cl. AM1 can grow well under specific environmental conditions, such as low temperature and in the presence of a relatively high concentration of free ammonia. These results help improve our comprehension of the functional importance of NitrotogaIMPORTANCE Nitrite-oxidizing bacteria (NOB) are key players in the second step of nitrification, which is an important process of the nitrogen cycle. Recent studies have suggested that the organisms of the novel NOB genus Nitrotoga were widely distributed and played a functional role in natural and engineered ecosystems. However, only a few Nitrotoga enrichments have been obtained, and little is known about their ecology and physiology. In this study, we successfully enriched a Nitrotoga sp. from sand in a shallow coastal marine ecosystem and undertook a physiological characterization. The laboratory experiments showed that the Nitrotoga enrichment culture could adapt not only to low temperature but also to relatively high concentrations of free ammonia. The determination of as-yet-unknown unique characteristics of Nitrotoga contributes to the improvement of our insights into the microbiology of nitrification.


Assuntos
Betaproteobacteria/isolamento & purificação , Betaproteobacteria/metabolismo , Sedimentos Geológicos/microbiologia , Nitritos/metabolismo , Amônia/metabolismo , Betaproteobacteria/classificação , Betaproteobacteria/genética , Temperatura Baixa , Oxirredução
9.
Front Microbiol ; 13: 859447, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35783389

RESUMO

Biological soil crusts occur worldwide as pioneer communities stabilizing the soil surface. In coastal primary sand dunes, vascular plants cannot sustain due to scarce nutrients and the low-water-holding capacity of the sand sediment. Thus, besides planted dune grass, biocrusts are the only vegetation there. Although biocrusts can reach high coverage rates in coastal sand dunes, studies about their biodiversity are rare. Here, we present a comprehensive overview of the biodiversity of microorganisms in such biocrusts and the neighboring sand from sampling sites along the Baltic Sea coast. The biodiversity of Bacteria, Cyanobacteria, Fungi, and other microbial Eukaryota were assessed using high-throughput sequencing (HTS) with a mixture of universal and group-specific primers. The results showed that the biocrusts recruit their microorganisms mainly from the neighboring sand rather than supporting a universal biocrust microbiome. Although in biocrusts the taxa richness was lower than in sand, five times more co-occurrences were identified using network analysis. This study showed that by comparing neighboring bare surface substrates with biocrusts holds the potential to better understand biocrust development. In addition, the target sequencing approach helps outline potential biotic interactions between different microorganisms groups and identify key players during biocrust development.

10.
Artigo em Inglês | MEDLINE | ID: mdl-35805592

RESUMO

Beach sand may act as a reservoir for numerous microorganisms, including enteric pathogens. Several of these pathogens originate in human or animal feces, which may pose a public health risk. In August 2019, high levels of fecal indicator bacteria (FIB) were detected in the sand of the Azorean beach Prainha, Terceira Island, Portugal. Remediation measures were promptly implemented, including sand removal and the spraying of chlorine to restore the sand quality. To determine the source of the fecal contamination, during the first campaign, supratidal sand samples were collected from several sites along the beach, followed by microbial source tracking (MST) analyses of Bacteroides marker genes for five animal species, including humans. Some of the sampling sites revealed the presence of marker genes from dogs, seagulls, and ruminants. Making use of the information on biological sources originating partially from dogs, the municipality enforced restrictive measures for dog-walking at the beach. Subsequent sampling campaigns detected low FIB contamination due to the mitigation and remediation measures that were undertaken. This is the first case study where the MST approach was used to determine the contamination sources in the supratidal sand of a coastal beach. Our results show that MST can be an essential tool to determine sources of fecal contamination in the sand. This study shows the importance of holistic management of beaches that should go beyond water quality monitoring for FIB, putting forth evidence for beach sand monitoring.


Assuntos
Bactérias/isolamento & purificação , Praias/normas , Areia/microbiologia , Poluição da Água , Animais , Bactérias/classificação , Bactérias/genética , Bacteroides/genética , Bacteroides/isolamento & purificação , Charadriiformes , Cães , Monitoramento Ambiental/métodos , Fezes/microbiologia , Portugal , Ruminantes , Microbiologia da Água , Poluição da Água/análise
11.
J Fungi (Basel) ; 8(10)2022 Oct 10.
Artigo em Inglês | MEDLINE | ID: mdl-36294628

RESUMO

The use of arbuscular mycorrhizal fungi (AMF) as biofertilizer in agriculture is a sustainable approach to fertilization. The first step in the production of AMF biofertilizer is inoculation of mycotrophic plants with a composite of soil and native plant roots, containing potentially viable AMF spores from natural habitats, to a trap culture. A single host plant or a consortium of host plants can be used to propagate AMF spores. However, the difference in the comparative efficiency of mono- and co-cultivated host plants used for the production of AMF spores and the maintenance of original AMF community composition has not been well elucidated. Here, we prepared trap culture with nutrient-poor soil from coastal sand dune vegetation collected during the dry season when the AMF spore density and relative abundance of Glomeromycota ITS2 sequences were significantly higher (p = <0.05) than in the wet season. The AMF communities in the soil were mainly composed of Glomus spp. Maize (Zea mays L.) and/or Sorghum (Sorghum bicolor (L.). Moench) were grown in trap cultures in the greenhouse. Our results demonstrated that co-cultivation of the host plants increased the production of AMF spores but, compared to mono-cultivation of host plants, did not better sustain the native AMF community compositions in the coastal sand dune soil. We propose that the co-cultivation of host plants in a trap culture broadens AMF-host plant compatibilities and thus sustains the symbiotic association of the natively diverse AMF. Therefore, the results of this study suggest that further research is needed to confirm whether the co-culturing of more than one host plant is as efficient a strategy as using a monoculture of a single host plant.

12.
3 Biotech ; 11(5): 252, 2021 May.
Artigo em Inglês | MEDLINE | ID: mdl-33968595

RESUMO

Coastal sand dunes (CSDs), unique, stressed and hostile habitats act as a barrier between marine and terrestrial ecosystems. CSDs are stressed in terms of nutrition and fluctuating physio-chemical conditions. CSD is classified into several types, each of which presents different challenges for life forms. This study focuses on exploring bacterial and archaeal diversity and community structure in four CSD namely, Embryo, Fore, Gray, and Mature dunes of Keri beach, Goa along the west coast of India. The study was carried out using Next Generation Sequencing of hypervariable V3-V4 regions of the 16S rRNA gene using Illumina HiSeq platform. The present study hypothesizes that the prokaryotic communities at each dune may be different and could have different role in the ecosystem. The NGS for Embryo, Fore, Gray, and Mature dunes gave 1,045,447, 1,451,753, 1,321,867, and 1,537,758 paired-end reads, respectively, out of which 54,500, 50,032, 37,819, and 111,186 were retained through various quality filtrations. A total of 74, 63, 65, and 65% of OTUs, respectively, remained unknown at the species level. The highest bacterial and archaeal abundance was reported from Mature and Embryo dunes, respectively. Phylum Actinobacteria dominated the Embryo, Fore, and Mature dunes, whereas phylum Proteobacteria was the dominant in the Gray dune. Streptomyces was predominant in overall CSD followed by Bacillus, Acidobacterium, and Kouleothrix. The commonly and exclusively found members in each dune are cataloged. The highest species dominance, diversity, species richness, and abundance were observed in Embryo, Fore, Gray, and Mature dunes, respectively. The present study clearly elucidates that each dune has a distinct microbial community structure. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s13205-021-02809-5.

13.
Plants (Basel) ; 9(9)2020 Aug 31.
Artigo em Inglês | MEDLINE | ID: mdl-32878034

RESUMO

Coastal sand dunes are dynamic ecosystems with elevated levels of disturbance and are highly susceptible to plant invasions. One invasive plant that is of concern to the Great Lakes system is Gypsophila paniculata L. (perennial baby's breath). The presence of G. paniculata negatively impacts native species and has the potential to alter ecosystem dynamics. Our research goals were to (1) estimate the genetic structure of invasive G. paniculata along the Michigan dune system and (2) identify landscape features that influence gene flow in this area. We analyzed 12 populations at 14 nuclear and two chloroplast microsatellite loci. We found strong genetic structure among populations (global FST = 0.228), and pairwise comparisons among all populations yielded significant FST values. Results from clustering analysis via STRUCTURE and discriminant analysis of principal components (DAPC) suggest two main genetic clusters that are separated by the Leelanau Peninsula, and this is supported by the distribution of chloroplast haplotypes. Land cover and topography better explained pairwise genetic distances than geographic distance alone, suggesting that these factors influence the genetic distribution of populations within the dunes system. Together, these data aid in our understanding of how invasive populations move through the dune landscape, providing valuable information for managing the spread of this species.

14.
Sci Total Environ ; 677: 340-349, 2019 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-31059877

RESUMO

The aim of this study was to investigate the influence of R. rugosa invasion on soil physicochemical and microbial properties of coastal sand dunes. The study was performed at 25 paired invaded-native plots along the Hel Peninsula at the coast of the Baltic Sea. A number of soil physicochemical and microbial parameters were measured, namely organic matter layer thickness, pH, electrical conductivity, organic C, total Ca, N, Na, P, N-NH4, N-NO3 and P-PO4 concentrations, phospholipid and neutral fatty acid (PLFA, NLFA) markers of total microbial, bacterial, fungal biomass and microbial community structure, as well as arbuscular mycorrhizal fungi (AMF) spore and species numbers, and the degree of AMF root colonization. Since potential alterations in soil parameters induced by R. rugosa may be related to large amounts of secondary metabolites provided to the soil with litter or root exudates, total phenolic concentration in senescing tissues of R. rugosa and native species was compared. Rosa rugosa invasion was associated with increased organic C, total N and P-PO4 concentrations in mineral soil relative to native vegetation. Organic matter layer under R. rugosa was thicker, had higher pH and Ca concentration. Rosa rugosa invasion was associated with reduced total microbial, bacterial and G+ bacterial biomass and increased AMF biomass markers (16:1ω5 NLFA and 16:1ω5 NLFA/PLFA), and changes in microbial community structure in mineral soil. The reduction in total and bacterial biomass under R. rugosa might have been related to the production of secondary metabolites as total phenolic concentration was approx. 5 times higher in senescing tissues of R. rugosa than in native vegetation. The observed increase in element concentrations and alterations in microbial community structure suggest that invasion of R. rugosa may threaten nutrient-poor habitats of coastal dunes. Changes in the soil environment may hinder restoration of these valuable habitats after invader removal.


Assuntos
Microbiota , Rosa/fisiologia , Microbiologia do Solo , Solo/química , Fenômenos Fisiológicos Bacterianos , Fungos/fisiologia , Espécies Introduzidas , Micorrizas/fisiologia , Nutrientes/análise , Dispersão Vegetal , Polônia
15.
Recent Pat Biotechnol ; 12(3): 177-185, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-29189184

RESUMO

BACKGROUND: Vegetable proteins have widespread application in the food industry as functional ingredients in food formulations according to the recent patents. Requirement to develop less expensive protein-rich supplementary foods has resulted in shift of emphasis towards lesser known wild than popular legumes. OBJECTIVE: The aim of this study is to expose seeds of two coastal sand dune wild legumes of the Southwest India (Canavalia cathartica and C. maritima) to different doses of electron-beam (EB) irradiation to assess changes in functional attributes. METHOD: Intact dried seeds were exposed to EB irradiation (2.5, 5, 10, 15 kGy). Protein solubility, gelation concentration, water-absorption capacity, oil-absorption capacity, emulsion properties and foam properties of control and irradiated seeds were assessed by standard methods. RESULTS: Protein solubility of both seed flours attained the highest at 2.5 kGy, followed by gradual dosedependent decrease. The gelation concentration increased in C. cathartica only at 5 kGy, while it decreased in C. maritima at 2.5 kGy without further change at higher doses. The water-absorption capacity of C. maritima was significantly higher than C. cathartica in control sample, while at 15 kGy C. cathartica showed significantly higher absorption capacity than C. maritima. The oil-absorption capacity was significantly higher in C. maritima than C. cathartica in control as well as all doses of irradiation. Emulsion activity of C. maritima was slightly higher than C. cathartica in control and irradiated samples, while both seeds showed similar emulsion stability in control with significant increase in C. cathartica at 10 kGy and 15 kGy. The foam capacity in both seeds was similar up to 2.5 kGy followed by significant increase in C. maritima at 5 kGy and 10 kGy. The foam stability was significantly higher C. cathartica than C. maritima in control as well as in irradiated samples. The foam capacity was higher in C. maritima than C. cathartica in control and irradiated samples, which showed gradual time-dependent decrease in stability with higher stability at 8 hr in C. cathartica than C. maritima. CONCLUSION: Improved functional properties (protein solubility, emulsion stability and foam capacity) and decreased gelation concentration in seeds of C. maritima irradiated at 5 kGy is advantageous in the production of functional foods. Even though both species of Canavalia grew on the coastal sand dunes and their seeds were exposed to same doses of radiation, they differed in functional attributes confirm that it is species-specific. Canavalia seeds being rich in proteins, carbohydrates, essential amino acids, essential fatty acids and bioactive components, further studies on the impact of EB irradiation helps in optimization of nutraceutical potential as well as functional attributes for future applications.


Assuntos
Canavalia , Tubo de Raio Catódico , Tecnologia de Alimentos/métodos , Alimento Funcional/efeitos da radiação , Proteínas de Vegetais Comestíveis/efeitos da radiação , Sementes/efeitos da radiação , Alimento Funcional/análise , Índia , Patentes como Assunto , Proteínas de Vegetais Comestíveis/análise
16.
Environ Pollut ; 242(Pt B): 2040-2050, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-30231458

RESUMO

Coastal areas provide important ecosystem services and affect local tourism. However, these areas are also sensitive to coastal erosion. The purpose of this study was to simulate a landscape plan scenario to improve the value of ecosystem services. The Shinduri coastal area in South Korea which has important natural resources, such as coastal sand dunes and coastal forests. To simulate landscape changes, this study was conducted using system dynamics. The study progressed in three stages: first, an analysis of the landscape change behavior model of Shinduri in its current state and an evaluation of the value of ecosystem services was conducted. Second, a simulation was carried out by applying a coastal erosion scenario. Third, a simulation of landscape change was run, and the value of ecosystem services was estimated, with regard to afforestation, thinning, weeding and coastal sand dune restoration plan scenarios. The results were as follows: in the absence of disturbances, current landscape change models are stable, and the value of ecosystem services, which was $859,259 in 2014, has increased over time. However, the value of ecosystem services decreased when subjected to a coastal erosion scenario. The evaluation of value of ecosystem services under afforestation, thinning, weeding and coastal sand dune plan scenarios revealed an optimal landscape plan that focuses on a coastal sand dune restoration plan suggesting restoration of these dunes at a rate of 27.05 ha per year. When the coastal sand dune restoration plan is applied, the value of ecosystem services increases to $ 895,474 by 2054. The coastal sand dune restoration plan should prioritize the protection of the coastal sand dune area as component of the restoration of coastal ecological resources in the area. These findings could contribute to the ecological management and improvement of coastal ecosystem services.


Assuntos
Ecologia/economia , Ecossistema , Monitoramento Ambiental/economia , Florestas , República da Coreia
17.
J Chromatogr A ; 1564: 25-33, 2018 Aug 24.
Artigo em Inglês | MEDLINE | ID: mdl-29887335

RESUMO

This work describes a new method for the determination of organic compounds in solid samples based on the equilibrium desorption of the analytes in an aqueous phase followed by stir bar sorptive-dispersive microextraction (SBSDME). Sand samples, contaminated with UV filters due to bathing and recreational activities, were dispersed in an aqueous medium by using a coated stir bar with CoFe2O4@oleic acid magnetic nanoparticles. The UV filters were physically desorbed from the surface of the sand particles and rapidly adsorbed on the hydrophobic coating of the nanoparticles, which were retrieved by means of their magnetism after stopping the stirring. In this manner, both preconcentration of the analytes and clean-up were simultaneously accomplished without the requirement of any additional sample preparation steps. After extraction, the analytes were desorbed in ethanol and then analyzed by gas chromatography-mass spectrometry (GC-MS). The main variables involved in the extraction process (i.e., sorbent amount, extraction time, pH and ionic strength) were studied to provide the best extraction efficiencies and maximum enrichment factors. Under the selected conditions, the figures of merit of the proposed method were evaluated providing limits of detection in the low ng g-1 range, enrichment factors between 23 and 80, and relative standard deviations (RSD%) below 14% for all the target analytes. Matrix effects were observed in real costal sand samples and thus standard addition calibration was employed for quantification. The method was successfully applied to the analysis of UV filters in several coastal sand samples of different origin. This work expands the analytical potential of the novel SBSDME approach to the determination of organic compounds in solid matrices.


Assuntos
Monitoramento Ambiental/métodos , Sedimentos Geológicos/química , Microextração em Fase Sólida , Protetores Solares/análise , Poluentes Químicos da Água/análise , Adsorção , Praias , Cromatografia Gasosa-Espectrometria de Massas , Interações Hidrofóbicas e Hidrofílicas , Compostos Orgânicos/análise , Concentração Osmolar , Água/química
18.
Plant Biol (Stuttg) ; 19(5): 824-834, 2017 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-28548454

RESUMO

Corema album is a dioecious coastal shrub. Dioecious plants growing in these resource-limited habitats may present spatial segregation of the sexes (SSS) or demographic biases because of the different reproductive effort between sexes. In these environments facilitation is a more common interaction between plants than competition. To assess factors determining the distribution of C. album male and female plants, we investigated the influence of habitat type (sand dunes and coastal woodlands), assessed the occurrence of SSS or demographic biases and also a possible role of these shrubs as nurse plants. We selected three C. album populations with the two habitat types. All C. album individuals were sexed, mapped and measured in three plots (20 m × 20 m) per population/habitat type. Presence and abundance of all plant species were recorded under five female and five male C. album plants as well as in equivalent open ground area in each of 15 plots. According to Ripley's K function result, C. album did not display SSS. Generalised linear mixed models (GLMM) show that differences in plant size were not related to plant sex. Plant inventory correspondence analysis showed that species composition and abundance were influenced by habitat type, population and the presence of a C. album individual, but not by its sex. GLMM indicated a detrimental effect of C. album on the co-occurring plants. Our results show that sexual dimorphism has allowed C. album to adapt to the environment avoiding SSS or significant demographic bias, suggesting a positive outlook for its conservation.


Assuntos
Ericaceae/fisiologia , Reprodução/fisiologia , Ecossistema
19.
Zookeys ; (611): 93-142, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27594800

RESUMO

Information about the snake diversity and their natural history from the Atlantic forest domain in Brazil refer mostly to inland forests than to coastal region. Within the state of Bahia, this knowledge is concentrated to the southeastern coastal stretch. Herein we report on the diversity of snakes from the restinga, ombrophilous forest and anthropogenic environment from the northern Atlantic coast of Bahia. We sampled nine sites for three years and visited four museum collections. Furthermore, we provide anecdotal natural history information, voucher analyses, literature complements, and a key to fascilitate species identification. We report a total of 774 snakes belonging to 50 species and 23 new distribution records for northeastern coast of Bahia, supplemented by new data on feeding and reproduction. The number of detected species is similar to numbers obtained in comparable studies from other Brazilian ecoregions. This study reports and focuses for the first time on all known species of snakes from the northeastern coast of Bahia.

20.
FEMS Microbiol Ecol ; 92(10)2016 10.
Artigo em Inglês | MEDLINE | ID: mdl-27411980

RESUMO

Complex interactions between plants and soil microorganisms drive key ecosystem and community properties such as productivity and diversity. In nutrient-poor systems such as sand dunes, plant traits and fungal symbioses related to nutrient acquisition can strongly influence vegetation dynamics. We investigated plant and fungal communities in a relic foredune plain located on an archipelago in Québec, Canada. We detected distinct communities across the edaphic and successional gradient. Our results showed a clear increase in plant species richness, as well as in the diversity of nutrient-acquisition strategies. We also found a strong correlation between aboveground vegetation and soil fungal communities, and both responded similarly to soil physicochemical properties. Soil pH influenced the composition of plant and fungal communities, and could act as an important environmental filter along this relic foredune plain. The increasing functional diversity in plant nutrient-acquisition strategies across the gradient might favor resource partitioning and facilitation among co-occurring plant species. The coordinated changes in soil microbial and plant communities highlight the importance of aboveground-belowground linkages and positive biotic interactions during ecological succession in nutrient-poor environments.


Assuntos
Ecossistema , Fungos/fisiologia , Microbiologia do Solo , Simbiose , Canadá , Meio Ambiente , Plantas/microbiologia , Solo/química
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