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Rev. bras. pesqui. méd. biol ; Braz. j. med. biol. res;51(5): e6213, 2018. tab, graf
Article in English | LILACS | ID: biblio-889085

ABSTRACT

Dermatophagoides farinae (Der f), one of the main species of house dust mites, produces more than 30 allergens. A recently identified allergen belonging to the alpha-tubulin protein family, Der f 33, has not been characterized in detail. In this study, we used bioinformatics tools to construct the secondary and tertiary structures and predict the B and T cell epitopes of Der f 33. First, protein attribution, protein patterns, and physicochemical properties were predicted. Then, a reasonable tertiary structure was constructed by homology modeling. In addition, six B cell epitopes (amino acid positions 34-45, 63-67, 103-108, 224-230, 308-316, and 365-377) and four T cell epitopes (positions 178-186, 241-249, 335-343, and 402-410) were predicted. These results established a theoretical basis for further studies and eventual epitope-based vaccine design against Der f 33.


Subject(s)
Animals , Tubulin/chemistry , Allergens/chemistry , Epitopes, T-Lymphocyte/chemistry , Epitopes, B-Lymphocyte/chemistry , Dermatophagoides farinae/chemistry , Antigens, Dermatophagoides/chemistry , Tubulin/genetics , Tubulin/immunology , Allergens/genetics , Allergens/immunology , Molecular Structure , Protein Structure, Tertiary , Epitope Mapping , Epitopes, T-Lymphocyte/genetics , Epitopes, B-Lymphocyte/genetics , Computational Biology , Sequence Analysis, Protein , Dermatophagoides farinae/genetics , Dermatophagoides farinae/immunology , Antigens, Dermatophagoides/genetics , Antigens, Dermatophagoides/immunology
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