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1.
Rev. chil. infectol ; 30(6): 626-629, dic. 2013. tab
Article in Spanish | LILACS | ID: lil-701711

ABSTRACT

Introduction: There is not known if a viraemia post-oral polio vaccine (OPV) is detectable by modern molecular techniques. Such viraemia could affect the performance of the real time-polymerase chain reaction (PCR) for non polio enterovirus (EV) detection, technique of growing clinical use for the study of febrile infants. Objective: To determine viraemia post-first dose of OPV in healthy infants, by molecular techniques. Patients and Methods: 50 infants less than three months without previous VPO were randomized in 5 groups: a control group with pre-vaccination blood sample (BS), group 1 BS at day 2, group 2 BS at day 4, group 3, BS at day 6 and group 4, BS at day 8 post-vaccination. Conventional and specific PCR for poliovirus and real time PCR for non polio EV were performed in BS and in OPV samples. Results: No genetic material of poliovirus was detected in any infant, while in 9 of them (18%) non polio EV was identified. Real time PCR for EV did not amplify poliovirus from OPV samples. Discussion: Results suggest that no post VPO viraemia detectable by molecular methods exists. Considering that real time PCR for EV does not allow to identify polio virus, no false positives of the test are expected as a result of a recent VPO vaccination. We documented presence of non polio EV in blood of healthy asymptomatic infants.


Introducción: No existen estudios que indiquen si la vacuna polio oral (VPO) produce viremia detectable mediante métodos moleculares. Una eventual viremia podría afectar el rendimiento de la RPC tiempo real para detectar enterovirus (EV) no polio, examen de creciente uso clínico en lactantes pequeños con fiebre sin foco. Objetivo: Determinar viremia post VPO en lactantes sanos, por métodos moleculares. Métodos: 50 menores de 3 meses, al momento de recibir su primera VPO se distribuyeron en forma aleatoria en 5 grupos: control, muestra de sangre pre-vacunación; grupo 1, muestra al 2° día; grupo 2, al 4° día; grupo 3, al 6° día y grupo 4, al 8° día post-vacunación. Se realizó RPC convencional específica para virus polio y RPC tiempo real para EV no polio en las muestras de sangre y en muestras de VPO. Resultados: No se identificó presencia de material genético de virus polio en lactante alguno, mientras que en 9 (18%) se identificó presencia de EV no polio. La RPC tiempo real para EV no polio no amplificó material genético a partir de las muestras de VPO. Discusión: Los resultados sugieren que no existe viremia post-VPO detectable por métodos moleculares. Considerando que la RPC tiempo real de EV no polio de uso clínico no permite identificar la presencia de virus polio, estos hallazgos indican que no existirán falsos positivos de este examen como resultado de una vacunación VPO reciente. Adicionalmente se documentó presencia de EV no polio en sangre de lactantes asintomáticos.


Subject(s)
Female , Humans , Infant , Male , Antibodies, Viral/blood , Enterovirus/isolation & purification , Poliovirus , Poliomyelitis/prevention & control , Poliovirus Vaccine, Oral/immunology , Enterovirus B, Human/genetics , Enterovirus B, Human/isolation & purification , Enterovirus/genetics , Poliomyelitis/immunology , Poliovirus/genetics , Poliovirus/immunology , Real-Time Polymerase Chain Reaction
2.
Mem. Inst. Oswaldo Cruz ; 107(5): 698-701, Aug. 2012. ilus, tab
Article in English | LILACS | ID: lil-643761

ABSTRACT

Outbreaks caused by vaccine-derived polioviruses are challenging the final eradication of paralytic poliomyelitis. Therefore, the surveillance of the acute flaccid paralysis cases based on poliovirus isolation and characterization remains an essential activity. Due to the use of trivalent oral poliovirus vaccine (OPV), mixtures containing more than one serotype of Sabin-related polioviruses are frequently isolated from clinical samples. Because each poliovirus isolate needs to be individually analyzed, we designed polymerase chain reaction primers that can selectively distinguish and amplify a genomic segment of the three Sabin-related poliovirus serotypes present in mixtures, thus, optimizing the diagnosis and providing prompt information to support epidemiologic actions.


Subject(s)
Humans , DNA Primers/genetics , Poliomyelitis/virology , Poliovirus Vaccine, Oral/genetics , Poliovirus/genetics , Genome, Viral , Mutation , Phenotype , Poliomyelitis/immunology , Poliovirus Vaccine, Oral/immunology , Poliovirus/immunology , Real-Time Polymerase Chain Reaction
3.
Medical Sciences Journal of Islamic Azad University. 2005; 15 (2): 51-57
in Persian | IMEMR | ID: emr-73566

ABSTRACT

In some countries, wild polioviruses have been isolated from environment despite the absence of viruses being recovered from clinical cases, therefore to confirm of final Polio eradication, WHO has recommended environmental surveillance using sewage specimens and surface water. During the present study, in order to assure the polio eradication in Iran, Sistan-Balouchestan province was chosen as the target area. During a 12-month period, 86 specimens from 2 sewage disposal systems and 5 hospitals, as well as surface water from several rural areas were collected by Grab Sampling and tested for polioviruses using direct and concentrated specimens with 2 concentration methods: Pellet and Two-phase. Then the isolated viruses were serotyped by microneutralization method and differentiated intratypically by ELISA and probe hybridization techniques. Of all studied specimens, 18 [20.9%] were identified as poliovirus, none of which were wild virus, fortunately. Among these, 2 [2.3%], 8 [9.3%] and 13 [15.1%] were isolated from direct specimens, Pellet and Two-phase concentrated specimens, respectively. The most frequent viruses were Polio 2 [72.2%] and Polio 3 [27.8%]. Results have revealed the efficacy of immunization coverage in Iran. Meanwhile, sufficient surveillance programs have been observed during the recent years


Subject(s)
Poliovirus/genetics , Epidemiology , Serotyping/methods , Molecular Probes , Environmental Monitoring/analysis , Enzyme-Linked Immunosorbent Assay , Poliovirus Vaccines , World Health Organization
4.
Article in English | IMSEAR | ID: sea-21119

ABSTRACT

BACKGROUND & OBJECTIVES: Significant progress has been made towards eradication of poliomyelitis in India. Surveillance for acute flaccid paralysis (AFP) has reached high standards. Among the 3 types of polioviruses, type 2 had been eliminated in India and eradicated globally as of October 1999. However, we isolated wild poliovirus type 2 from a small number of polio cases in northern India in 2000 and again during December 2002 to February 2003. Using molecular tools the origin, of the wild type 2 poliovirus was investigated. METHODS: Polioviruses isolated from stool samples collected from patients with AFP were differentiated as wild virus or Sabin vaccine-like by ELISA and probe hybridization assays. Complete VP1 gene nucleotide sequences of the wild type 2 poliovirus isolates were determined by reverse transcriptase polymerase chain reaction (RT-PCR), followed by cycle sequencing. VP1 nucleotide sequences were compared with those of wild type 2 polioviruses that were indigenous in India in the past as well as prototype/laboratory strains and the GenBank database. RESULTS: Wild poliovirus type 2 was detected in stool samples from 6 patients with AFP in western Uttar Pradesh and 1 in Gujarat. In addition, the virus was isolated from one healthy contact child and from environmental sewage sample in Moradabad where three of these patients were reported. These isolates were identified as genetically closely related to laboratory reference strain MEF-1. Molecular characterization of the isolates confirmed that there was no evidence of extensive person-to-person transmission of the virus in the community. INTERPRETATION & CONCLUSION: Laboratory reference strain (MEF-1) of poliovirus type 2 caused paralytic poliomyelitis in 10 patients in September 2000 and November 2002 to February 2003. The origin of the virus was some laboratory as yet not identified. This episode highlights the urgent need for stringent containment of wild poliovirus containing materials in the laboratories across the country in order to prevent recurrence of such incidents.


Subject(s)
Capsid Proteins/genetics , Child , DNA, Viral/genetics , Molecular Epidemiology , Genes, Viral , Humans , India/epidemiology , Laboratories , Phylogeny , Poliomyelitis/epidemiology , Poliovirus/genetics , Reverse Transcriptase Polymerase Chain Reaction
5.
Article in English | IMSEAR | ID: sea-19656

ABSTRACT

The potential resolving power of molecular epidemiological studies has enhanced the precision and reliability of poliovirus (PV) surveillance. PV has an error prone RNA polymerase responsible for rapid evolution of genome (approximately 10(-2) nt substitution/site/year), during inter and intra-human passages. The present study included a serotyped panel of 60 PV (42 PV type-1, 13 PV type-2 and 5 PV type-3) isolated during 1997. They were differentiated into vaccine (Sabin) and wild strains by two methods viz., genotype specific RNA probe hybridization (Rpro-Hy) based on genotypic variability; and ELISA that uses cross-absorbed antiserum (Pab-E) based on phenotypic variability. For obtaining information on molecular epidemiology, partial nucleotide sequencing (VP1/2A region) of five clinical PV isolates was also done. Three of the 60 isolates (two PV type-1 and one PV type-3) intratyped, could not be differentiated correctly by either method. Genotypic characterization of PV isolates was done for confirmation of intratyping results. All five wild PV1 sequenced belonged to the same genotype (> 85% homology) and sequence divergence among the strains was < or = 4.5 per cent. This indicated circulation of a single genetic lineage in the area.


Subject(s)
Base Sequence , Child , Child, Preschool , Genome, Viral , Humans , India/epidemiology , Infant , Molecular Sequence Data , Poliomyelitis/epidemiology , Poliovirus/genetics , RNA, Viral/genetics , Sequence Analysis
6.
Southeast Asian J Trop Med Public Health ; 2000 Mar; 31(1): 47-56
Article in English | IMSEAR | ID: sea-35690

ABSTRACT

This study describes the rapid detection of polioviruses in environmental waters by a simple reverse transcriptase-polymerase chain reaction (RT-PCR) using two primer pairs for differentiation of poliovirus from non-polio enteroviruses in a single reaction by a one-step method, combining RT and PCR in a single tube. The detection by agarose gel electrophoresis yielded 2 bands of 153-bp and 293-bp for poliovirus tested without the need for further hybridization. The detection sensitivity of this one-step duplex RT-PCR, as measured with RNA extracted by heat treatment from supernatant of infected cell extracts, was 10(-1) 50% tissue culture effective doses (TCID50). This assay was used to evaluate the ability of sample concentration by membrane filter-based adsorption and elution, and purification by a simple RNA isolation based on guanidine isothiocyanate-phenol-chloroform extraction; the system yielded a detection limit of 5 x 10(-1) TCID50 seeded in 5 liters of tap water. This protocol was applied to the poliovirus detection in environmental water collected from 2 communities in Bangkok, Thailand during February and May 1998. Of 100 samples tested, 2 water samples collected from the same open sewage pipeline at one location were positive for polioviruses and one sample collected from another sewage pipeline was positive for non-polio enterovirus while a further 97 water samples were negative for both polioviruses and non-polio enteroviruses. With poliovirus detection by cell culture technique, none of the 100 samples tested was positive for poliovirus type 1, 2 or 3. RT-PCR was more sensitive, rapid, simple and cost-effective than the cell culture technique since the two water samples which were positive for polioviruses by RT-PCR failed to be detected by cell culture. Sequence data of 293-bp amplicons from positive samples were compared with those of reference poliovirus strains in the Genbank and the EMBL databases and identity to the sequence of type 1 strain Sabin was found to be 99%.


Subject(s)
Animals , Cell Line , Chlorocebus aethiops , Electrophoresis, Agar Gel , Filtration , Poliovirus/genetics , RNA, Viral/analysis , Reverse Transcriptase Polymerase Chain Reaction , Sensitivity and Specificity , Thailand , Virus Cultivation , Water Microbiology
7.
Rev. cuba. med. trop ; 50(2): 100-104, Mayo-ago. 1998.
Article in Spanish | LILACS | ID: lil-629283

ABSTRACT

Se introdujo la técnica de la reacción en cadena de la polimerasa para la caracterización intratípica de Poliovirus. Se usaron cebadores que sólo promueven la ampliación de las cepas vacunales de Sabin, comprobada por corrida electroforética de los productos de ADN amplificados (Sabin 1-97 pb, Sabin 2-71 pb, Sabin 3-44 pb) y cuya especificidad se verificó satisfactoriamente. Se estudiaron por esta técnica 23 cepas cubanas de Poliovirus aisladas e identificadas en el Laboratorio de Enterovirus del Instituto de Medicina Tropical "Pedro Kourí" de 1993 a 1994, y todas resultaron ser del tipo vacunal. Se observó cómo el Poliovirus vacunal de Sabin puede ser causa de meningoencefalitis viral como complicación neurológica más leve. Este estudio aportó una evidencia más a favor de la no circulación del Poliovirus salvaje en Cuba.


The polimerase chain reaction techniques was introduced for the intratypic characterization of Poliovirus. Primers were used only to promote the amplification of the Sabin vaccine strains proved by electrophoretic run of the amplified DNA products (Sabin 1 - 97 pb, Sabin 2 - 71 pb, Sabin 3 - 44 pb) and whose specificity was satisfactorily verified. 23 Cuban poliovirus strains isolated and identified at the Laboratory of Enterovirus of the "Pedro Kourí" Tropical Medicine Institute from 1993 to 1994 were studied by this technique. All of them were of the vaccine type. It was observed how the Sabin vaccine poliovirus may be the cause of viral meningoencephalitis as a milder neurological complication. Tghis study provided one more evidence about the non circulation of the wild poliovirus in Cuba.


Subject(s)
Humans , Poliovirus/classification , Polymerase Chain Reaction/methods , Base Sequence , Molecular Sequence Data , Oligonucleotide Probes , Poliovirus/genetics , Poliovirus/isolation & purification , Polymerase Chain Reaction/statistics & numerical data , RNA, Viral/genetics
8.
Braz. j. med. biol. res ; 30(6): 695-703, jun. 1997.
Article in English | LILACS | ID: lil-194168

ABSTRACT

Oral poliovirus vaccine (OPV) developed by A. Sabin has been effectively used to control poliomyelitis in Brazil, and the last case with the isolation of a wild poliovirus strain occourred in March 1989. Although the vaccine controlled the circulation ...


Subject(s)
Humans , Facial Paralysis/genetics , Facial Paralysis/virology , Myelitis, Transverse/genetics , Myelitis, Transverse/virology , Poliomyelitis/prevention & control , Poliovirus Vaccine, Oral/adverse effects , Poliovirus/genetics , Polyradiculoneuropathy/genetics , Polyradiculoneuropathy/virology , Brazil , Polymerase Chain Reaction
9.
Arch. med. res ; 27(3): 413-9, 1996. ilus
Article in English | LILACS | ID: lil-200342

ABSTRACT

Poliovirus induces a shut-off of cellular messenger RNA (MRNA) translation by the proteolysis of a 220 kDa protein from the eukaryotic initiation factor eIF-4F, and by the phosphorylation of eIF-2. The absence of eIF-4F inhibiths the initiation of translation dependent on capa structure recognition. Poliovirus RNA lacks cap structure and translates by a cap-independent mechanism which requires internal ribosomal entry. The poliovirus 5' untranslated region (5'UTR) contains the structural elements for cap-independent translation called internal ribosomal entry site (IRES element). Several cellular proteins have been described interacting with different segments from poliovirus 5'UTR. We have studied the specific interaction between 57/60, 52, and 35 kDa cellular proteins with poliovirus nt 275 to 636 and full length 5'UTR. By Western blot assay the 57/60 protein was identified as a pyramidine tract binding protein PTB are nuclear proteins involved in RNA polymerase III transcription termination an splicing, respectively


Subject(s)
Blotting, Western , Molecular Biology , Poliovirus/genetics , Nuclear Proteins/genetics , RNA Viruses/physiology
10.
Braz. j. med. biol. res ; 23(1): 1-5, 1990. ilus
Article in English | LILACS | ID: lil-83163

ABSTRACT

The nucleotide sequences encoding the capsid protein VP1 were determined for the wild polioviruses of serotypes 1 and 3 endemic to the northeastern region of Brazil. Compared with the corresponding Sabin vaccine strain sequences, the wild isolates differed at 20%(type 1) and 22%(type 3) of their nucleotide positions, and in 7%(type 1) and 11%(type 3) of their amino acid residues. The highest degree of amino acid heterogeneity occurred within the amino-terminal residues of the VP1 proteins. Intratypic amino acid differences also occurred in VP1 surface residues that form parts of antigenic sites for neutralizing antibodies


Subject(s)
Base Sequence , Capsid/genetics , Genes, Viral , Poliovirus/genetics , Antigens, Viral/immunology , Brazil , Mutation , Poliomyelitis/transmission , Poliovirus/immunology , Poliovirus/isolation & purification , Antigenic Variation/genetics
11.
Mem. Inst. Oswaldo Cruz ; 80(1): 23-5, jan.-mar. 1985. tab
Article in Portuguese | LILACS | ID: lil-1265

ABSTRACT

Uma reaçäo imuno-enzimática em microplacas foi utilizada para a diferenciaçäo do caráter genético de amostras de poliovirus, em relaçäo às amostras padröes atenuadas de Sabin tipos 1,2 e 3 e às amostrwas virulentas Mahoney, MEF- 1 e Saukett, utilizando soros policlonais mono-específicos, preparados por absorçäo com as amostras heterólogas de cada tipo. Em 74 das 79 amostras de vírus examinadas (93,6%) foi possivel identificar o seu caráter como amostras selvagens ou vacinais. A utilizaçäo da prova imuno-enzimática aplicada aos vírus da poliomielite é discutida


Subject(s)
Antigens, Viral , Poliovirus/genetics , Immunoenzyme Techniques
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