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Epidemiologia dos bocavirus humano em amostras fecais históricas no Brasil (1998-2005) / Epidemiology of human bocavirus in historical fecal samples in Brazil (1998-2005)
São Paulo; s.n; 2024. 16-130 p. ilus, graf, tab.
Thesis in Pt | LILACS, CONASS, ColecionaSUS, SES-SP, SESSP-CTDPROD, SES-SP, SESSP-ACVSES, SESSP-TESESESSP, SES-SP | ID: biblio-1555568
Responsible library: BR91.2
Localization: BR91.2; W4, S729e
RESUMO
O bocavírus humano (HBoV) foi descrito pela primeira vez em 2005 e desde então associado como agente etiológico causador de doenças respiratórias e diarreia em todo mundo. Há 4 genótipos de HBoV identificados até o momento. HBoV-1 é comumente associado as infecções respiratórias, enquanto o HBoV-2, HBoV-3 e HBoV-4 são frequentemente detectados em amostras fecais. Coinfecções envolvendo o HBoV e outros agentes virais entéricos são frequentes. Vírus entéricos podem ser preservados em fezes congeladas por longos períodos. O objetivo do presente estudo foi investigar a frequência e a diversidade genotípica dos HBoV em amostras fecais históricas armazenadas e coletadas antes de 2005, a fim de compreender a história natural dos HBoV em pacientes com diarreia nas regiões Centro Oeste, Sul e Sudeste do Brasil. A associação do HBoV com outros vírus gastroentéricos de importância epidemiológica na doença diarreica também foi explorada. Um total de 3347 amostras foram selecionadas e testadas para HBoV por qPCR. As amostras positivas foram genotipadas por PCR convencional seguido de sequenciamento Sanger. As amostras positivas para HBoV por qPCR também foram testadas para a presença de Norovírus (NoV) por RT-qPCR e para Adenovirus Humano (HAdV) por PCR convencional e sequenciamento. HBoV foi detectado em 5,8% (195/3347). Coinfecção com NoV foi encontrada em 25,6% (50/195), HAdV 8,2% (16/195) e a tripla-infecção em 1% (2/195), totalizando 34,9% (68/195) de casos de coinfecções. Esses achados indicam que o HBoV pode ter um papel epidemiológico importante como único agente causador de doença diarreica em pacientes (65,2% de monoinfecções). A taxa de detecção variou significativamente de acordo com os anos de 2000-2001, 2002-2003 e 2003-2004 (p<0,05).
ABSTRACT
The human bocavirus (HBoV) was first described in 2005 and has since been associated as an etiological agent causing respiratory diseases and diarrhea worldwide. There are four genotypes of HBoV identified so far. HBoV-1 is commonly associated with respiratory infections, while HBoV-2, HBoV-3, and HBoV-4 are often detected in fecal samples. Coinfections involving HBoV and other enteric viral agents are common. Enteric viruses can be preserved in frozen feces for long periods. The aim of this study was to investigate the frequency and genotypic diversity of HBoV in stored historical fecal samples collected before 2005, in order to understand the natural history of HBoV in patients with diarrhea in the South and Southeast regions of Brazil. The association of HBoV with other gastroenteric viruses of epidemiological importance in diarrheal disease was also explored. A total of 3347 selected samples were tested for HBoV by qPCR. Positive samples were genotyped by conventional PCR followed by Sanger sequencing. Samples positive for HBoV by qPCR were also tested for the presence of Norovirus (NoV) by RT-qPCR and Human Adenovirus (HAdV) by conventional PCR and sequencing. HBoV was detected in 5.8% (195/3347) of samples. Coinfection with NoV was found in 25.6% (50/195), HAdV in 8.2% (16/195), and triple infection in 1% (2/195), totaling 34.9% (68/195) of coinfection cases. These findings indicate that HBoV may play an important epidemiological role as a single causative agent of diarrheal disease in patients (65.2% of monoinfections). The detection rate varied significantly according to the years 2000-2001, 2002-2003, and 2003-2004 (p<0.05), reinforcing that HBoV is an important pathogen in childhood diarrhea. The genotype was obtained in 32.8% (64/195) of positive HBoV samples, and genetic analysis identified the circulation of HBoV-1
Subject(s)
Full text: 1 Index: LILACS Main subject: Polymerase Chain Reaction / Molecular Typing / Public Health Surveillance / Gastroenteritis Country/Region as subject: America do sul / Brasil Language: Pt Year: 2024 Type: Thesis
Full text: 1 Index: LILACS Main subject: Polymerase Chain Reaction / Molecular Typing / Public Health Surveillance / Gastroenteritis Country/Region as subject: America do sul / Brasil Language: Pt Year: 2024 Type: Thesis