Identification and expression analysis of EST-based genes in the bud of Lycoris longituba / 基因组蛋白质组与生物信息学报·英文版
Genomics, Proteomics & Bioinformatics
; (4): 43-46, 2004.
Article
in En
| WPRIM
| ID: wpr-339496
Responsible library:
WPRO
ABSTRACT
To obtain a primary overview of gene diversity and expression pattern in Lycoris longituba, 4,992 ESTs (Expressed Sequence Tags) from L. longituba bud were sequenced and 4,687 cleaned ESTs were used for gene expression analysis. Clustered by the PHRAP program, 967 contigs and 1,343 singlets were obtained. Blast search showed that 179 contigs and 227 singlets (totally 1,066 ESTs) had homologues in GenBank and 3,621 ESTs were novel.
Full text:
1
Index:
WPRIM
Main subject:
Base Composition
/
Genetic Variation
/
Gene Expression Regulation, Plant
/
Computational Biology
/
Expressed Sequence Tags
/
Lycoris
/
Flowering Tops
/
Genetics
Type of study:
Diagnostic_studies
Language:
En
Journal:
Genomics, Proteomics & Bioinformatics
Year:
2004
Type:
Article