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1.
Mol Syst Biol ; 16(4): e9495, 2020 04.
Article in English | MEDLINE | ID: mdl-32337855

ABSTRACT

The prevalence of non-alcoholic fatty liver disease (NAFLD) continues to increase dramatically, and there is no approved medication for its treatment. Recently, we predicted the underlying molecular mechanisms involved in the progression of NAFLD using network analysis and identified metabolic cofactors that might be beneficial as supplements to decrease human liver fat. Here, we first assessed the tolerability of the combined metabolic cofactors including l-serine, N-acetyl-l-cysteine (NAC), nicotinamide riboside (NR), and l-carnitine by performing a 7-day rat toxicology study. Second, we performed a human calibration study by supplementing combined metabolic cofactors and a control study to study the kinetics of these metabolites in the plasma of healthy subjects with and without supplementation. We measured clinical parameters and observed no immediate side effects. Next, we generated plasma metabolomics and inflammatory protein markers data to reveal the acute changes associated with the supplementation of the metabolic cofactors. We also integrated metabolomics data using personalized genome-scale metabolic modeling and observed that such supplementation significantly affects the global human lipid, amino acid, and antioxidant metabolism. Finally, we predicted blood concentrations of these compounds during daily long-term supplementation by generating an ordinary differential equation model and liver concentrations of serine by generating a pharmacokinetic model and finally adjusted the doses of individual metabolic cofactors for future human clinical trials.


Subject(s)
Acetylcysteine/administration & dosage , Carnitine/administration & dosage , Metabolomics/methods , Niacinamide/analogs & derivatives , Serine/administration & dosage , Acetylcysteine/blood , Adult , Animals , Carnitine/blood , Dietary Supplements , Drug Therapy, Combination , Healthy Volunteers , Humans , Male , Models, Animal , Niacinamide/administration & dosage , Niacinamide/blood , Non-alcoholic Fatty Liver Disease/diet therapy , Precision Medicine , Pyridinium Compounds , Rats , Serine/blood
2.
Mol Syst Biol ; 13(3): 916, 2017 03 02.
Article in English | MEDLINE | ID: mdl-28254760

ABSTRACT

To elucidate the molecular mechanisms underlying non-alcoholic fatty liver disease (NAFLD), we recruited 86 subjects with varying degrees of hepatic steatosis (HS). We obtained experimental data on lipoprotein fluxes and used these individual measurements as personalized constraints of a hepatocyte genome-scale metabolic model to investigate metabolic differences in liver, taking into account its interactions with other tissues. Our systems level analysis predicted an altered demand for NAD+ and glutathione (GSH) in subjects with high HS Our analysis and metabolomic measurements showed that plasma levels of glycine, serine, and associated metabolites are negatively correlated with HS, suggesting that these GSH metabolism precursors might be limiting. Quantification of the hepatic expression levels of the associated enzymes further pointed to altered de novo GSH synthesis. To assess the effect of GSH and NAD+ repletion on the development of NAFLD, we added precursors for GSH and NAD+ biosynthesis to the Western diet and demonstrated that supplementation prevents HS in mice. In a proof-of-concept human study, we found improved liver function and decreased HS after supplementation with serine (a precursor to glycine) and hereby propose a strategy for NAFLD treatment.


Subject(s)
Glutathione/metabolism , Lipoproteins/metabolism , Metabolomics/methods , NAD/metabolism , Non-alcoholic Fatty Liver Disease/genetics , Serine/administration & dosage , Animals , Disease Models, Animal , Female , Gene Expression Regulation, Enzymologic , Genome , Glycine/blood , Humans , Liver/enzymology , Liver/metabolism , Male , Mice , Middle Aged , Non-alcoholic Fatty Liver Disease/diet therapy , Non-alcoholic Fatty Liver Disease/metabolism , Patient-Specific Modeling , Serine/blood , Serine/therapeutic use
3.
J Nutr Biochem ; 33: 111-8, 2016 07.
Article in English | MEDLINE | ID: mdl-27155917

ABSTRACT

Studies on metabolism of polyphenols have revealed extensive transformations in the carbon backbone by colonic microbiota; however, the influence of microbial and hepatic transformations on human urinary metabolites has not been explored. Therefore, the aims of this study were (1) to compare the in vitro microbial phenolic metabolite profile of foods and beverages with that excreted in urine of subjects consuming the same foodstuff and (2) to explore the role of liver on postcolonic metabolism of polyphenols by using in vitro hepatic models. A 24-h urinary phenolic metabolite profile was evaluated in 72 subjects participating in an 8-week clinical trial during which they were randomly assigned to diets differing for polyphenol content. Polyphenol-rich foods and beverages used in the clinical trial were subjected to human fecal microbiota in the in vitro colon model. Metabolites from green tea, one of the main components of the polyphenol-rich diet, were incubated with primary hepatocytes to highlight hepatic conversion of polyphenols. The analyses were performed using targeted gas chromatography with mass spectrometer (GCxGC-TOFMS:colon model; GC-MS: urine and hepatocytes). A significant correlation was found between urinary and colonic metabolites with C1-C3 side chain (P=.040). However, considerably higher amounts of hippuric acid, 3-hydroxybenzoic acid and ferulic acid were detected in urine than in the colon model. The hepatic conversion showed additional amounts of these metabolites complementing the gap between in vitro colon model and the in vivo urinary excretion. Therefore, combining in vitro colon and hepatic models may better elucidate the metabolism of polyphenols from dietary exposure to urinary metabolites.


Subject(s)
Colon/microbiology , Diet , Gastrointestinal Microbiome , Liver/metabolism , Models, Biological , Overweight/metabolism , Polyphenols/metabolism , Adult , Algorithms , Cells, Cultured , Coumaric Acids/metabolism , Coumaric Acids/urine , Feces/microbiology , Food Handling , Hippurates/metabolism , Hippurates/urine , Humans , Hydroxybenzoates/metabolism , Hydroxybenzoates/urine , Intestinal Mucosa/microbiology , Liver/cytology , Obesity/metabolism , Obesity/urine , Overweight/urine , Oxidation-Reduction , Polyphenols/administration & dosage , Polyphenols/urine , Tea/chemistry
4.
PLoS One ; 10(6): e0130898, 2015.
Article in English | MEDLINE | ID: mdl-26098110

ABSTRACT

OBJECTIVE: The first objective was to investigate if intracellular and extracellular levels of reactive oxygen species (ROS) within the mouse aorta increase before or after diet-induced lesion formation. The second objective was to investigate if intracellular and extracellular ROS correlates to cell composition in atherosclerotic lesions. The third objective was to investigate if intracellular and extracellular ROS levels within established atherosclerotic lesions can be reduced by lipid lowering by diet or atorvastatin. APPROACH AND RESULTS: To address our objectives, we established a new imaging technique to visualize and quantify intracellular and extracellular ROS levels within intact mouse aortas ex vivo. Using this technique, we found that intracellular, but not extracellular, ROS levels increased prior to lesion formation in mouse aortas. Both intracellular and extracellular ROS levels were increased in advanced lesions. Intracellular ROS correlated with lesion content of macrophages. Extracellular ROS correlated with lesion content of smooth muscle cells. The high levels of ROS in advanced lesions were reduced by 5 days high dose atorvastatin treatment but not by lipid lowering by diet. Atorvastatin treatment did not affect lesion inflammation (aortic arch mRNA levels of CXCL 1, ICAM-1, MCP-1, TNF-α, VCAM, IL-6, and IL-1ß) or cellular composition (smooth muscle cell, macrophage, and T-cell content). CONCLUSIONS: Aortic levels of intracellular ROS increase prior to lesion formation and may be important in initiation of atherosclerosis. Our results suggest that within lesions, macrophages produce mainly intracellular ROS whereas smooth muscle cells produce extracellular ROS. Short term atorvastatin treatment, but not lipid lowering by diet, decreases ROS levels within established advanced lesions; this may help explain the lesion stabilizing and anti-inflammatory effects of long term statin treatment.


Subject(s)
Aorta/metabolism , Atorvastatin/pharmacology , Coronary Artery Disease/pathology , Reactive Oxygen Species/metabolism , Analysis of Variance , Animals , Aorta/pathology , Apolipoproteins E/genetics , Benzimidazoles , Diet, Fat-Restricted , Female , Lipids/blood , Luminescent Measurements , Mice , Mice, Knockout , Reverse Transcriptase Polymerase Chain Reaction
5.
PLoS One ; 9(7): e100376, 2014.
Article in English | MEDLINE | ID: mdl-25049048

ABSTRACT

Dietary medium chain fatty acids (MCFA) and linoleic acid follow different metabolic routes, and linoleic acid activates PPAR receptors. Both these mechanisms may modify lipoprotein and fatty acid metabolism after dietary intervention. Our objective was to investigate how dietary MCFA and linoleic acid supplementation and body fat distribution affect the fasting lipoprotein subclass profile, lipoprotein kinetics, and postprandial fatty acid kinetics. In a randomized double blind cross-over trial, 12 male subjects (age 51±7 years; BMI 28.5±0.8 kg/m2), were divided into 2 groups according to waist-hip ratio. They were supplemented with 60 grams/day MCFA (mainly C8:0, C10:0) or linoleic acid for three weeks, with a wash-out period of six weeks in between. Lipoprotein subclasses were measured using HPLC. Lipoprotein and fatty acid metabolism were studied using a combination of several stable isotope tracers. Lipoprotein and tracer data were analyzed using computational modeling. Lipoprotein subclass concentrations in the VLDL and LDL range were significantly higher after MCFA than after linoleic acid intervention. In addition, LDL subclass concentrations were higher in lower body obese individuals. Differences in VLDL metabolism were found to occur in lipoprotein lipolysis and uptake, not production; MCFAs were elongated intensively, in contrast to linoleic acid. Dietary MCFA supplementation led to a less favorable lipoprotein profile than linoleic acid supplementation. These differences were not due to elevated VLDL production, but rather to lower lipolysis and uptake rates.


Subject(s)
Dietary Fats/metabolism , Linoleic Acid/metabolism , Lipolysis , Lipoproteins, VLDL/metabolism , Adult , Dietary Fats/administration & dosage , Dietary Supplements/analysis , Double-Blind Method , Fasting , Fatty Acids/administration & dosage , Fatty Acids/metabolism , Humans , Linoleic Acid/administration & dosage , Lipoproteins, LDL/metabolism , Male , Middle Aged
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