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1.
Toxicol Lett ; 318: 74-85, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31654802

ABSTRACT

Metabolic flexibility defines the capacity of cells to respond to changes in nutrient status. Mitochondria are important mediators of metabolic flexibility and dysfunction is associated with metabolic inflexibility and pathology. Foodborne toxins are often overlooked as potential factors contributing to metabolic toxicity. Fusaric acid (FA), a neglected mycotoxin, is known to disrupt mitochondrial function. The aim of this study was to investigate the molecular mechanisms underlying a metabolic switch in response to FA. This study investigated the effects of FA on energy homeostasis in cultured human liver (HepG2) cells. HepG2 cells poised to undergo oxidative and glycolytic metabolism were exposed to a range of FA concentrations (4, 63 and 250 µg/mL) for 6 h. We determined mitochondrial toxicity, acetyl CoA levels and cell viability using luminometric, fluorometric and spectrophotometric methods. Expression of metabolic proteins (PDK1, PKM2, phosphorylated-PDH E1α and HIF-1α) and mRNAs (HIF-1α, PKM2, LDHa and PDK1) were determined using western blot and qPCR respectively. Our data connects a constitutive expression of HIF-1α in response to FA, to the inhibition of pyruvate decarboxylation through up-regulation of PDK-1 and phosphorylation of Pyruvate Dehydrogenase E1α subunit. Moreover, we highlight the potential of FA to induce a glucose "addiction" and phenotype reminiscent of the Warburg effect. The findings provide novel insights into the impact of this neglected foodborne mycotoxin in the dysregulation of energy metabolism.


Subject(s)
Cell Plasticity/drug effects , Food Microbiology , Fusaric Acid/toxicity , Glycolysis/drug effects , Hepatocytes/drug effects , Mitochondria, Liver/drug effects , Hep G2 Cells , Hepatocytes/metabolism , Hepatocytes/pathology , Humans , Hypoxia-Inducible Factor 1, alpha Subunit/genetics , Hypoxia-Inducible Factor 1, alpha Subunit/metabolism , Mitochondria, Liver/metabolism , Mitochondria, Liver/pathology , Phenotype , Phosphorylation , Protein Serine-Threonine Kinases/genetics , Protein Serine-Threonine Kinases/metabolism , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Pyruvate Dehydrogenase Acetyl-Transferring Kinase
2.
Cell Mol Life Sci ; 75(16): 3009-3026, 2018 08.
Article in English | MEDLINE | ID: mdl-29445841

ABSTRACT

The pyruvate dehydrogenase complex (PDC) bridges glycolysis and the citric acid cycle. In human, PDC deficiency leads to severe neurodevelopmental delay and progressive neurodegeneration. The majority of cases are caused by variants in the gene encoding the PDC subunit E1α. The molecular effects of the variants, however, remain poorly understood. Using yeast as a eukaryotic model system, we have studied the substitutions A189V, M230V, and R322C in yeast E1α (corresponding to the pathogenic variants A169V, M210V, and R302C in human E1α) and evaluated how substitutions of single amino acid residues within different functional E1α regions affect PDC structure and activity. The E1α A189V substitution located in the heterodimer interface showed a more compact conformation with significant underrepresentation of E1 in PDC and impaired overall PDC activity. The E1α M230V substitution located in the tetramer and heterodimer interface showed a relatively more open conformation and was particularly affected by low thiamin pyrophosphate concentrations. The E1α R322C substitution located in the phosphorylation loop of E1α resulted in PDC lacking E3 subunits and abolished overall functional activity. Furthermore, we show for the E1α variant A189V that variant E1α accumulates in the Hsp60 chaperonin, but can be released upon ATP supplementation. Our studies suggest that pathogenic E1α variants may be associated with structural changes of PDC and impaired folding of E1α.


Subject(s)
Amino Acid Substitution , Pyruvate Dehydrogenase (Lipoamide)/genetics , Pyruvate Dehydrogenase Complex Deficiency Disease/genetics , Pyruvate Dehydrogenase Complex/genetics , Saccharomyces cerevisiae Proteins/genetics , Amino Acid Sequence , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Humans , Microscopy, Confocal , Protein Folding , Pyruvate Dehydrogenase (Lipoamide)/chemistry , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Pyruvate Dehydrogenase Complex/chemistry , Pyruvate Dehydrogenase Complex/metabolism , Pyruvate Dehydrogenase Complex Deficiency Disease/metabolism , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae Proteins/metabolism , Sequence Homology, Amino Acid
3.
Mol Biosyst ; 13(8): 1504-1511, 2017 Jul 25.
Article in English | MEDLINE | ID: mdl-28632266

ABSTRACT

Xuesaitong injection (XST), which mainly consists of Panax notoginseng saponins, has been widely used for treating cardio-cerebral vascular diseases. However, the underlying mechanisms of XST associated with its cardioprotective effects are still unclear. To identify the potential target proteins of XST, two-dimensional gel electrophoresis (2-DE)-based proteomics was utilized to analyze the protein profile of myocardium in rats with myocardial ischemia/reperfusion (I/R) injury. The differentially expressed proteins were identified by matrix assisted laser desorption/ionization time-of-flight mass spectrometry. It is interesting that XST can alter the expression of 7 proteins, including pyruvate dehydrogenase E1 alpha (PDHA1), hydroxyacyl-coenzyme A dehydrogenase (HADHA), peroxiredoxin 3 (PRX3), gamma-enolase, acetyl-coenzyme A acyltransferase 2 (ACAA2), etc. Functional analysis revealed that those proteins were chiefly related to cardiac energy metabolism and oxidative stress. The cardioprotective effects of XST were further validated in H9c2 cardiac muscle cells with hypoxia/reoxygenation injury. We found that XST can promote the activity of PDH, an important enzyme related to the TCA cycle, as well as increase the intracellular content of acetyl-CoA and ATP. Moreover, XST also attenuated intracellular MDA release in H2O2-injured cardiac cells. This is the first study on the proteomic expression of XST-treated myocardium with I/R injury to reveal that the cardioprotective effects of XST may be attributed to the PDH-mediated restoration of aerobic glucose oxidation.


Subject(s)
Cardiovascular Agents/pharmacology , Drugs, Chinese Herbal/pharmacology , Energy Metabolism/drug effects , Gene Expression Regulation , Myocardial Reperfusion Injury/drug therapy , Neuroprotective Agents/pharmacology , Saponins/pharmacology , Acetyl-CoA C-Acyltransferase/genetics , Acetyl-CoA C-Acyltransferase/metabolism , Animals , Cell Line , Energy Metabolism/genetics , Gene Expression Profiling , Homeodomain Proteins/genetics , Homeodomain Proteins/metabolism , Male , Mitochondrial Trifunctional Protein, alpha Subunit/genetics , Mitochondrial Trifunctional Protein, alpha Subunit/metabolism , Myocardial Reperfusion Injury/genetics , Myocardial Reperfusion Injury/metabolism , Myocardial Reperfusion Injury/pathology , Myocardium/metabolism , Myocardium/pathology , Myocytes, Cardiac/drug effects , Myocytes, Cardiac/metabolism , Myocytes, Cardiac/pathology , Oxidative Stress , Phosphopyruvate Hydratase/genetics , Phosphopyruvate Hydratase/metabolism , Pyruvate Dehydrogenase (Lipoamide)/genetics , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Rats , Rats, Sprague-Dawley , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
4.
Nutrients ; 8(12)2016 Dec 13.
Article in English | MEDLINE | ID: mdl-27983572

ABSTRACT

The aim of the study was to evaluate the effect of selenium supplementation on the expression of genes associated with glucose metabolism in humans, in order to explain the unclear relationship between selenium and the risk of diabetes. For gene expression analysis we used archival samples of cDNA from 76 non-diabetic subjects supplemented with selenium in the previous study. The supplementation period was six weeks and the daily dose of selenium was 200 µg (as selenium yeast). Blood for mRNA isolation was collected at four time points: before supplementation, after two and four weeks of supplementation, and after four weeks of washout. The analysis included 15 genes encoding selected proteins involved in insulin signaling and glucose metabolism. In addition, HbA1c and fasting plasma glucose were measured at three and four time points, respectively. Selenium supplementation was associated with a significantly decreased level of HbA1c but not fasting plasma glucose (FPG) and significant down-regulation of seven genes: INSR, ADIPOR1, LDHA, PDHA, PDHB, MYC, and HIF1AN. These results suggest that selenium may affect glycemic control at different levels of regulation, linked to insulin signaling, glycolysis, and pyruvate metabolism. Further research is needed to investigate mechanisms of such transcriptional regulation and its potential implication in direct metabolic effects.


Subject(s)
Blood Glucose/drug effects , Blood Glucose/genetics , Gene Expression Regulation/drug effects , Selenium/pharmacology , Trace Elements/pharmacology , Adult , Antigens, CD/blood , Antigens, CD/metabolism , Blood Glucose/metabolism , Dietary Supplements , Down-Regulation/drug effects , Fasting/blood , Female , Genes, myc/drug effects , Glycated Hemoglobin/analysis , Glycated Hemoglobin/drug effects , Homeostasis , Humans , Lactate Dehydrogenases/blood , Lactate Dehydrogenases/metabolism , Male , Mixed Function Oxygenases/blood , Mixed Function Oxygenases/metabolism , Pyruvate Dehydrogenase (Lipoamide)/blood , Pyruvate Dehydrogenase (Lipoamide)/metabolism , RNA, Messenger/blood , RNA, Messenger/isolation & purification , Receptor, Insulin/blood , Receptor, Insulin/metabolism , Receptors, Adiponectin/blood , Receptors, Adiponectin/metabolism , Repressor Proteins/blood , Repressor Proteins/metabolism , Selenium/administration & dosage , Trace Elements/administration & dosage
5.
Proteomics ; 16(17): 2419-31, 2016 09.
Article in English | MEDLINE | ID: mdl-27357730

ABSTRACT

Prostate cancer is one of the leading cancers in men. Taking dietary supplements, such as fish oil (FO), which is rich in n-3 polyunsaturated fatty acids (PUFAs), has been employed as a strategy to lower prostate cancer risk and control disease progression. In this study, we investigated the global phosphoproteomic changes induced by FO using a combination of phosphoprotein-enrichment strategy and high-resolution tandem mass spectrometry. We found that FO induces many more phosphorylation changes than oleic acid when they both are compared to control group. Quantitative comparison between untreated group and FO- or oleic acid-treated groups uncovered a number of important protein phosphorylation changes induced by n-3PUFAs. This phosphoproteomic discovery study and the follow-up Western Blot validation study elucidate that phosphorylation levels of the two regulatory serine residues in pyruvate dehydrogenase alpha 1 (PDHA1), serine-232 and serine-300, are significantly decreased upon FO treatment. As expected, increased pyruvate dehydrogenase activity was also observed. This study suggests that FO-induced phosphorylation changes in PDHA1 is more likely related to the glucose metabolism pathway, and n-3 PUFAs may have a role in controlling the balance between lipid and glucose oxidation.


Subject(s)
Fatty Acids, Omega-3/therapeutic use , Fish Oils/therapeutic use , Phosphoproteins/metabolism , Prostatic Neoplasms/diet therapy , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Amino Acid Sequence , Animals , Cell Line, Tumor , Dietary Supplements/analysis , Humans , Male , Oleic Acids/therapeutic use , Phosphopeptides/analysis , Phosphopeptides/metabolism , Phosphoproteins/analysis , Phosphorylation , Prostate/metabolism , Prostatic Neoplasms/metabolism , Proteome/analysis , Proteome/metabolism , Pyruvate Dehydrogenase (Lipoamide)/chemistry , Tandem Mass Spectrometry
6.
Proc Natl Acad Sci U S A ; 106(34): 14670-5, 2009 Aug 25.
Article in English | MEDLINE | ID: mdl-19667196

ABSTRACT

Mitochondrial dysfunction has been proposed to play a pivotal role in neurodegenerative diseases, including Alzheimer's disease (AD). To address whether mitochondrial dysfunction precedes the development of AD pathology, we conducted mitochondrial functional analyses in female triple transgenic Alzheimer's mice (3xTg-AD) and age-matched nontransgenic (nonTg). Mitochondrial dysfunction in the 3xTg-AD brain was evidenced by decreased mitochondrial respiration and decreased pyruvate dehydrogenase (PDH) protein level and activity as early as 3 months of age. 3xTg-AD mice also exhibited increased oxidative stress as manifested by increased hydrogen peroxide production and lipid peroxidation. Mitochondrial amyloid beta (Abeta) level in the 3xTg-AD mice was significantly increased at 9 months and temporally correlated with increased level of Abeta binding to alcohol dehydrogenase (ABAD). Embryonic neurons derived from 3xTg-AD mouse hippocampus exhibited significantly decreased mitochondrial respiration and increased glycolysis. Results of these analyses indicate that compromised mitochondrial function is evident in embryonic hippocampal neurons, continues unabated in females throughout the reproductive period, and is exacerbated during reproductive senescence. In nontransgenic control mice, oxidative stress was coincident with reproductive senescence and accompanied by a significant decline in mitochondrial function. Reproductive senescence in the 3xTg-AD mouse brain markedly exacerbated mitochondrial dysfunction. Collectively, the data indicate significant mitochondrial dysfunction occurs early in AD pathogenesis in a female AD mouse model. Mitochondrial dysfunction provides a plausible mechanistic rationale for the hypometabolism in brain that precedes AD diagnosis and suggests therapeutic targets for prevention of AD.


Subject(s)
Alzheimer Disease/metabolism , Brain/metabolism , Disease Models, Animal , Mitochondria/metabolism , Alzheimer Disease/genetics , Alzheimer Disease/pathology , Amyloid/metabolism , Animals , Blotting, Western , Brain/pathology , Electron Transport Complex IV/metabolism , Female , Hippocampus/metabolism , Hippocampus/pathology , Humans , Hydrogen Peroxide/metabolism , Immunohistochemistry , Lipid Peroxidation , Lipid Peroxides/metabolism , Mice , Mice, Inbred C57BL , Mice, Inbred Strains , Mice, Transgenic , Oxidative Stress , Oxygen Consumption , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Time Factors
7.
J Appl Physiol (1985) ; 104(1): 1-9, 2008 Jan.
Article in English | MEDLINE | ID: mdl-17947500

ABSTRACT

Pyruvate dehydrogenase (PDH) is an important regulator of carbohydrate oxidation during exercise, and its activity can be downregulated by an increase in dietary fat. The purpose of this study was to determine the acute metabolic effects of differential dietary fatty acids on the activation of the PDH complex (PDHa activity) at rest and at the onset of moderate-intensity exercise. University-aged male subjects (n = 7) underwent two fat-loading trials spaced at least 2 wk apart. Subjects consumed approximately 300 g saturated (SFA) or n-6 polyunsaturated fatty acid (PUFA) fat over the course of 5 h. Following this, participants cycled at 65% of their maximum oxygen uptake for 15 min. Muscle biopsies were taken before and following fat loading and at 1 min exercise. Plasma free fatty acids increased from 0.15 +/- 0.07 to 0.54 +/- 0.19 mM over 5 h with SFA and from 0.11 +/- 0.04 to 0.35 +/- 0.13 mM with n-6 PUFA and were significantly lower throughout the n-6 PUFA trial. PDHa activity was unchanged following fat loading but increased at the onset of exercise in the SFA trial, from 1.18 +/- 0.27 to 2.16 +/- 0.37 mmol x min(-1) x kg wet wt(-1). This effect was negated in the n-6 PUFA trial (1.04 +/- 0.20 to 1.28 +/- 0.36 mmol x min(-1) x kg wet wt(-1)). PDH kinase was unchanged in both trials, suggesting that the attenuation of PDHa activity with n-6 PUFA was a result of changes in the concentrations of intramitochondrial effectors, potentially intramitochondrial NADH or Ca(2+). Our findings suggest that attenuated PDHa activity contributes to the preferential oxidation of n-6 PUFA during moderate-intensity exercise.


Subject(s)
Dietary Fats/metabolism , Energy Metabolism , Exercise/physiology , Fatty Acids, Unsaturated/metabolism , Fatty Acids/metabolism , Muscle, Skeletal/metabolism , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Pyruvate Dehydrogenase Complex/metabolism , Adult , Dietary Fats/administration & dosage , Energy Metabolism/drug effects , Enzyme Activation , Fatty Acids/administration & dosage , Fatty Acids, Nonesterified/blood , Fatty Acids, Unsaturated/administration & dosage , Humans , Male , Muscle, Skeletal/drug effects , Muscle, Skeletal/enzymology , Oxidation-Reduction , Oxygen Consumption , Protein Serine-Threonine Kinases/metabolism , Pulmonary Gas Exchange , Pyruvate Dehydrogenase Acetyl-Transferring Kinase , Time Factors
8.
Mitochondrion ; 7(4): 253-9, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17392036

ABSTRACT

Mutations in the E1alpha subunit gene (PDHA1) of the pyruvate dehydrogenase complex (PDC) are common causes of congenital lactic acidosis. An animal model of E1alpha deficiency could provide insight into the pathological consequences of mutations and serve to test potential therapies. Small interfering RNAs (siRNAs) were designed to cleave the messenger RNA (mRNA) of the E1alpha subunit and were tested in vitro to assess the feasibility of producing a gene knockdown in rats. HEK 293 cells were co-transfected with a rat PDHA1 expression vector and eight naked siRNAs that specifically targeted rat E1alpha mRNA. Quantitative PCR (qPCR) analyses showed that four siRNAs reduced rat PDHA1 RNA levels up to 85% by 24h and up to 65% by 56h, compared to negative and positive controls. Since oligonucleotide-mediated siRNA delivery provided only transient suppression, we next selected two siRNA candidates and generated self-complementary, double-stranded adeno-associated virus (scAAV) vectors (serotypes 2 and 5) expressing a rat short hairpin siRNA expression cassette (scAAVsi-PDHA1). Rat lung fibroblast (RLF) cultures were infected with scAAVsi-PDHA1 vectors. The RLF PDHA1 mRNA level was reduced 53-80% 72h after infection and 54-70% 10 days after infection in RLF cultures. The expression of E1alpha and the specific activity of pyruvate dehydrogenase were also decreased at 10 days after infection in RLF cultures. Thus, scAAV siRNA-mediated knockdown of PDHA1 gene expression provides a strategy that may be applied to create a useful animal model of PDC deficiency.


Subject(s)
Dependovirus/genetics , Down-Regulation , Gene Expression Regulation, Enzymologic , Pyruvate Dehydrogenase (Lipoamide)/metabolism , RNA, Small Interfering/genetics , Animals , Cell Line , Fibroblasts , Genetic Vectors/genetics , Humans , Kinetics , Lung/metabolism , Pyruvate Dehydrogenase (Lipoamide)/genetics , Rats , Transition Temperature
9.
Diabetologia ; 50(4): 824-32, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17310372

ABSTRACT

AIMS/HYPOTHESIS: This study examined the efficacy of supplemental L: -carnitine as an adjunctive diabetes therapy in mouse models of metabolic disease. We hypothesised that carnitine would facilitate fatty acid export from tissues in the form of acyl-carnitines, thereby alleviating lipid-induced insulin resistance. MATERIALS AND METHODS: Obese mice with genetic or diet-induced forms of insulin resistance were fed rodent chow +/- 0.5% L: -carnitine for a period of 1-8 weeks. Metabolic outcomes included insulin tolerance tests, indirect calorimetry and mass spectrometry-based profiling of acyl-carnitine esters in tissues and plasma. RESULTS: Carnitine supplementation improved insulin-stimulated glucose disposal in genetically diabetic mice and wild-type mice fed a high-fat diet, without altering body weight or food intake. In severely diabetic mice, carnitine supplementation increased average daily respiratory exchange ratio from 0.886 +/- 0.01 to 0.914 +/- 0.01 (p < 0.01), reflecting a marked increase in systemic carbohydrate oxidation. Similarly, under insulin-stimulated conditions, carbohydrate oxidation was higher and total energy expenditure increased from 172 +/- 10 to 210 +/- 9 kJ kg fat-free mass(-1) h(-1) in the carnitine-supplemented compared with control animals. These metabolic improvements corresponded with a 2.3-fold rise in circulating levels of acetyl-carnitine, which accounts for 86 and 88% of the total acyl-carnitine pool in plasma and skeletal muscle, respectively. Carnitine supplementation also increased several medium- and long-chain acyl-carnitine species in both plasma and tissues. CONCLUSIONS/INTERPRETATION: These findings suggest that carnitine supplementation relieves lipid overload and glucose intolerance in obese rodents by enhancing mitochondrial efflux of excess acyl groups from insulin-responsive tissues. Carefully controlled clinical trials should be considered.


Subject(s)
Carnitine/therapeutic use , Diabetes Mellitus, Experimental/blood , Diabetes Mellitus, Experimental/drug therapy , Animals , Calorimetry/methods , Carnitine/analogs & derivatives , Carnitine/metabolism , Carnitine/pharmacology , Fatty Acids/metabolism , Glucose Tolerance Test , Glycerol/metabolism , Insulin Resistance , Male , Mass Spectrometry , Mice , Mice, Obese , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Vitamin B Complex/therapeutic use
10.
Plant Cell ; 17(8): 2355-68, 2005 Aug.
Article in English | MEDLINE | ID: mdl-15994907

ABSTRACT

Rapid pollen tube growth places unique demands on energy production and biosynthetic capacity. The aim of this work is to understand how primary metabolism meets the demands of such rapid growth. Aerobically grown pollen produce ethanol in large quantities. The ethanolic fermentation pathway consists of two committed enzymes: pyruvate decarboxylase (PDC) and alcohol dehydrogenase (ADH). Because adh mutations do not affect male gametophyte function, the obvious question is why pollen synthesize an abundant enzyme if they could do just as well without. Using transposon tagging in Petunia hybrida, we isolated a null mutant in pollen-specific Pdc2. Growth of the mutant pollen tubes through the style is reduced, and the mutant allele shows reduced transmission through the male, when in competition with wild-type pollen. We propose that not ADH but rather PDC is the critical enzyme in a novel, pollen-specific pathway. This pathway serves to bypass pyruvate dehydrogenase enzymes and thereby maintain biosynthetic capacity and energy production under the unique conditions prevailing during pollen-pistil interaction.


Subject(s)
Petunia/enzymology , Pollen/enzymology , Pyruvate Dehydrogenase (Lipoamide)/genetics , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Germination , Molecular Sequence Data , Multigene Family , Mutagenesis, Insertional , Mutation , Petunia/genetics , Petunia/growth & development , Pollen/genetics , Pollen/growth & development , Pyruvates/metabolism
11.
Biosci Biotechnol Biochem ; 69(2): 301-6, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15725654

ABSTRACT

Previous studies have suggested that docosahexaenoic acid (DHA), contained in fish oil, prevents brain disease. In the current study, the effect of fish oil feeding on gene expression in the brain was investigated by suppression subtractive hybridization. We found that pyruvate dehydrogenase E1 alpha (PDHE1alpha) mRNA expression is down-regulated by fish oil feeding. We examined whether the expression of PDHE1alpha mRNA is altered by DHA treatment in differentiated PC12 cells. PDHE1alpha mRNA was reduced by supplementation of DHA with a significant decrease in cellular ATP level. These results indicate that fish oil feeding might modulate energy metabolism in the brain.


Subject(s)
Brain/enzymology , Down-Regulation/drug effects , Fish Oils/pharmacology , Gene Expression Regulation, Enzymologic/drug effects , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Animals , Brain/drug effects , Dietary Supplements , Male , Mice , Mice, Inbred Strains , RNA, Messenger/metabolism
12.
Hum Mutat ; 22(6): 496-7, 2003 Dec.
Article in English | MEDLINE | ID: mdl-14635113

ABSTRACT

In a patient with fatal neonatal lactic acidosis due to pyruvate dehydrogenase deficiency, the only potential mutation detected was c.888C>G in PDHA1, the gene for the E1alpha subunit of the complex. This would result in a substitution of glutamate for aspartate (D296E). Pathogenicity of this minor alteration in amino acid sequence was demonstrated by expression studies. By comparing the mutant sequence with the known structures of the E1 components of pyruvate dehydrogenase and the closely related branched chain alpha-ketoacid dehydrogenase, an explanation for the profound consequences of the mutation can be proposed.


Subject(s)
Amino Acid Substitution/genetics , Pyruvate Dehydrogenase (Lipoamide)/genetics , Pyruvate Dehydrogenase Complex Deficiency Disease/genetics , Aspartic Acid/genetics , Catalytic Domain/genetics , DNA Mutational Analysis , DNA, Complementary/chemistry , DNA, Complementary/genetics , Fatal Outcome , Female , Fibroblasts/enzymology , Fibroblasts/metabolism , Glutamic Acid/genetics , Humans , Infant, Newborn , Male , Models, Molecular , Mutation , Pyruvate Dehydrogenase (Lipoamide)/chemistry , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Pyruvate Dehydrogenase Complex Deficiency Disease/pathology
13.
J Biol Chem ; 278(28): 26021-30, 2003 Jul 11.
Article in English | MEDLINE | ID: mdl-12714601

ABSTRACT

Two highly phosphorylated proteins were detected after two-dimensional (blue native/SDS-PAGE) gel electrophoretic separation of the matrix fraction isolated from potato tuber mitochondria. These two phosphoproteins were identified by mass spectrometry as formate dehydrogenase (FDH) and the E1alpha-subunit of pyruvate dehydrogenase (PDH). Isoelectric focusing/SDS-PAGE two-dimensional gels separated FDH and PDH and resolved several different phosphorylated forms of FDH. By using combinations of matrix-assisted laser desorption/ionization mass spectrometry and electrospray ionization tandem mass spectrometry, several phosphorylation sites were identified for the first time in FDH and PDH. FDH was phosphorylated on Thr76 and Thr333, whereas PDH was phosphorylated on Ser294. Both Thr76 and Thr333 in FDH were accessible to protein kinases, as demonstrated by protein structure homology modeling. The extent of phosphorylation of both FDH and PDH was strongly decreased by NAD+, formate, and pyruvate, indicating that reversible phosphorylation of FDH and PDHs was regulated in a similar fashion. At low oxygen concentrations inside the intact potato tubers, FDH activity was strongly increased relative to cytochrome c oxidase activity pointing to a possible involvement of FDH in hypoxic metabolism. Computational sequence analysis indicated that a conserved local sequence motif of pyruvate formate-lyase is found in the Arabidopsis thaliana genome, and this enzyme might be the source of formate for FDH in plants.


Subject(s)
Formate Dehydrogenases/metabolism , Mitochondria/enzymology , Solanum tuberosum/metabolism , Amino Acid Motifs , Amino Acid Sequence , Arabidopsis/genetics , Electron Transport Complex IV/metabolism , Electrophoresis, Gel, Two-Dimensional , Electrophoresis, Polyacrylamide Gel , Formate Dehydrogenases/chemistry , Hypoxia , Isoelectric Focusing , Mass Spectrometry , Mitochondria/metabolism , Models, Chemical , Models, Molecular , Molecular Sequence Data , Oxygen/metabolism , Phosphorylation , Protein Binding , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Sequence Homology, Amino Acid , Software , Spectrometry, Mass, Electrospray Ionization , Threonine/metabolism
14.
Pediatr Res ; 53(5): 793-9, 2003 May.
Article in English | MEDLINE | ID: mdl-12621116

ABSTRACT

Dichloroacetate (DCA) is a structural analog of pyruvate that has been recommended for the treatment of primary lactic acidemia, particularly in patients with pyruvate dehydrogenase (PDHC) deficiency. Recent reports have demonstrated that the response to DCA may depend on the type of molecular abnormality. In this study, we investigated the response to DCA in various PDHC-deficient cell lines and tried to determine the mechanism involved. The effect of chronic 3-d DCA treatment on PDHC activity was assessed in two PDHC-deficient cell lines, each with a different point mutation in the E1alpha subunit gene (R378C and R88C), and one cell line in which an 8-bp tandem repeat was deleted (W383 del). Only two (R378C and R88C) of the three PDHC-deficient cell lines with very low levels of PDHC activity and unstable polypeptides were sensitive to chronic DCA treatment. In these cell lines, DCA treatment resulted in an increase in PDHC activity by 125 and 70%, respectively, with concomitant increases of 121 and 130% in steady-state levels of immunoreactive E1alpha. DCA treatment reduced the turnover of the E1alpha subunit in R378C and R88C mutant cells with no significant effect on the E1beta subunit. Chronic DCA treatment significantly improved the metabolic function of PDHC in digitonin-permeabilized R378C and R88C fibroblasts. The occurrence of DCA-sensitive mutations suggests that DCA treatment is potentially useful as an adjuvant to ketogenic and vitamin treatment in PDHC-deficient patients.


Subject(s)
Dichloroacetic Acid/pharmacology , Pyruvate Dehydrogenase Complex Deficiency Disease/drug therapy , Pyruvate Dehydrogenase Complex Deficiency Disease/metabolism , Pyruvate Dehydrogenase Complex/metabolism , Cells, Cultured , Dihydrolipoyllysine-Residue Acetyltransferase , Enzyme Activation/drug effects , Female , Fibroblasts/cytology , Fibroblasts/enzymology , Humans , In Vitro Techniques , Infant , Lymphocytes/cytology , Lymphocytes/enzymology , Male , Pyruvate Dehydrogenase (Lipoamide)/biosynthesis , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Pyruvate Dehydrogenase Complex/biosynthesis , Severity of Illness Index
15.
Plant J ; 34(1): 57-66, 2003 Apr.
Article in English | MEDLINE | ID: mdl-12662309

ABSTRACT

We hypothesized that cytoplasmic male sterility (CMS) in sugar beet may be the consequence of mitochondrial dysfunctions affecting normal anther development. To test the hypothesis, we attempted to mimic the sugar beet CMS phenotype by inhibiting the expression of mitochondrial pyruvate dehydrogenase (PDH), which is essential for the operation of the tricarboxylic acid (TCA) cycle. Screening with a cDNA library of sugar beet flower buds allowed the identification of two PDH E1alpha subunit genes (bvPDH_E1alpha-1 and bvPDH_E1alpha-2). bvPDH_E1alpha-1 was found to be highly expressed in tap roots, whereas bvPDH_E1alpha-2 was expressed most abundantly in flower buds. Green fluorescent protein (GFP) fusion of bvPDH_E1alpha revealed mitochondrial targeting properties. A 300-bp bvPDH_E1alpha-1 cDNA sequence (from +620 to +926) was connected to a tapetum-specific promoter in the antisense orientation and then introduced into tobacco. Antisense expression of bvPDH_E1alpha-1 resulted in conspicuously decreased endogenous bvPDH_E1alpha-1 transcripts and male sterility. The tapetum in the male-sterile anthers showed swelling or abnormal vacuolation. It is also worth noting that in the sterile anthers, cell organelles, such as elaioplasts, tapetosomes and orbicules were poorly formed and microspores exhibited aberrant exine development. These features are shared by sugar beet CMS. The results thus clearly indicate that inhibition of PDH activity in anther tapetum is sufficient to cause male sterility, a phenocopy of the sugar beet CMS.


Subject(s)
Beta vulgaris/enzymology , Beta vulgaris/genetics , Beta vulgaris/physiology , DNA, Antisense/metabolism , Mitochondria/enzymology , Pyruvate Dehydrogenase (Lipoamide)/genetics , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Amino Acid Sequence , Base Sequence , Cloning, Molecular , DNA, Antisense/genetics , DNA, Complementary/genetics , Fertility/physiology , Flowers/cytology , Flowers/genetics , Flowers/physiology , Flowers/ultrastructure , Genes, Plant/genetics , Molecular Sequence Data , Phenotype , Plants, Genetically Modified , Pyruvate Dehydrogenase (Lipoamide)/chemistry , Nicotiana/cytology , Nicotiana/genetics , Nicotiana/physiology , Nicotiana/ultrastructure
16.
Chem Biol ; 10(12): 1293-302, 2003 Dec.
Article in English | MEDLINE | ID: mdl-14700636

ABSTRACT

Lipoic acid is synthesized from octanoic acid by insertion of sulfur atoms at carbons 6 and 8 and is covalently attached to a pyruvate dehydrogenase (PDH) subunit. We show that sulfur atoms can be inserted into octanoyl moieties attached to a PDH subunit or a derived domain. Escherichia coli lipB mutants grew well when supplemented with octanoate in place of lipoate. Octanoate growth required both lipoate protein ligase (LplA) and LipA, the sulfur insertion protein, suggesting that LplA attached octanoate to the dehydrogenase and LipA then converted the octanoate to lipoate. This pathway was tested by labeling a PDH domain with deuterated octanoate in an E. coli strain devoid of LipA activity. The labeled octanoyl domain was converted to lipoylated domain upon restoration of LipA. Moreover, octanoyl domain and octanoyl-PDH were substrates for sulfur insertion in vitro.


Subject(s)
Bacterial Proteins , Escherichia coli/enzymology , Ligases , Pyruvate Dehydrogenase (Lipoamide)/chemistry , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Thioctic Acid/chemistry , Thioctic Acid/metabolism , Acyltransferases/genetics , Acyltransferases/metabolism , Caprylates/metabolism , Caprylates/pharmacology , Chromatography, High Pressure Liquid , Escherichia coli/genetics , Escherichia coli/growth & development , Escherichia coli/metabolism , Escherichia coli Proteins/genetics , Escherichia coli Proteins/metabolism , Lipoproteins/genetics , Lipoproteins/metabolism , Mass Spectrometry , Membrane Proteins/genetics , Membrane Proteins/metabolism , Mutation/genetics , Protein Structure, Tertiary , Protein Subunits/chemistry , Protein Subunits/metabolism , Sulfur/metabolism , Thioctic Acid/biosynthesis
17.
J Inherit Metab Dis ; 26(7): 671-4, 2003.
Article in English | MEDLINE | ID: mdl-14707515

ABSTRACT

Mutations in the E1alpha subunit of the pyruvate dehydrogenase multienzyme complex may result in congenital lactic acidosis, but little is known about the consequences of these mutations at the enzymatic level. Here we characterize two mutants (F205L and T231A) of human pyruvate dehydrogenase in vitro, using the enzyme expressed in Escherichia coli. Wild-type and mutant proteins were purified successfully and their kinetic parameters were measured. F205L shows impaired binding of the thiamin diphosphate cofactor, which may explain why patients carrying this mutation respond to high-dose vitamin B1 therapy. T231A has very low activity and a greatly elevated Km for pyruvate, and this combination of effects would be expected to result in severe lactic acidosis. The results lead to a better understanding of the consequences of these mutations on the functional and structural properties of the enzyme, which may lead to improved therapies for patients carrying these mutations.


Subject(s)
Pyruvate Dehydrogenase (Lipoamide)/genetics , Pyruvate Dehydrogenase (Lipoamide)/metabolism , Acidosis, Lactic/genetics , Acidosis, Lactic/metabolism , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression Regulation, Enzymologic/genetics , Humans , Kinetics , Mutagenesis, Site-Directed , Mutation/genetics , Thiamine/therapeutic use , Thiamine Pyrophosphate/metabolism
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